Click here to switch to the map view.

The map label for this gene is ydfG [H]

Identifier: 82702125

GI number: 82702125

Start: 1155945

End: 1156397

Strand: Reverse

Name: ydfG [H]

Synonym: Nmul_A0996

Alternate gene names: 82702125

Gene position: 1156397-1155945 (Counterclockwise)

Preceding gene: 82702126

Following gene: 82702124

Centisome position: 36.32

GC content: 52.98

Gene sequence:

>453_bases
ATGTCAGAAAGAATCAATCTGGGTAAATCCGCTCCAGCCCTTTACCAAGCCGTCATGGGCCTTGAGAAGCTGGCAGCGGA
GGCCATTGCTTCCGCAAGCATCCCCGAGGGCTTTGCACATCTGCTGCGCCTTCGTGCATCCCAACTCAACCAGTGCGCAT
TCTGCATCAGGATGCATACTCATGACGCCCTGTCCAGTGGCGAGTCGAGCGATCGCATAAGTGTCCTGCCTGCCTGGCGG
GAAACCGGGTATTTCACTGAAAAGGAACGTTCATCGTTGGCACTGGTGGAAGCAATCACATTGATCTCTGAGGGACAAGT
ACCGGATGCCATCTATGAGCAAGCAGCAGCCCATCTGTCAAAAAATGAAATATCGGCTGTCGAGTGGCTCTCGGTAGTCA
TCAATGCTTGGAATCGCATTGCCATTTCCAGCCGTTATCCTGTGAAGGCATGA

Upstream 100 bases:

>100_bases
CGTTTGTCGATCTAAAGGTTCATTACGCCGAACCCATCACTGTGGATCAACCCGGCCAGTAGCTTATTCGCTGGCAGGTA
CATATAGGGGAGGAGATTTC

Downstream 100 bases:

>100_bases
GCATGGCCAACAATTCTCCACTCATTTCCATCAACGAAAGGAGACATAATGTTTACCAGGTTTCTCTGCAGCGTTGCCTG
CGCAGCTCTCTCCATAAGCG

Product: alkylhydroperoxidase AhpD core

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 149

Protein sequence:

>150_residues
MSERINLGKSAPALYQAVMGLEKLAAEAIASASIPEGFAHLLRLRASQLNQCAFCIRMHTHDALSSGESSDRISVLPAWR
ETGYFTEKERSSLALVEAITLISEGQVPDAIYEQAAAHLSKNEISAVEWLSVVINAWNRIAISSRYPVKA

Sequences:

>Translated_150_residues
MSERINLGKSAPALYQAVMGLEKLAAEAIASASIPEGFAHLLRLRASQLNQCAFCIRMHTHDALSSGESSDRISVLPAWR
ETGYFTEKERSSLALVEAITLISEGQVPDAIYEQAAAHLSKNEISAVEWLSVVINAWNRIAISSRYPVKA
>Mature_149_residues
SERINLGKSAPALYQAVMGLEKLAAEAIASASIPEGFAHLLRLRASQLNQCAFCIRMHTHDALSSGESSDRISVLPAWRE
TGYFTEKERSSLALVEAITLISEGQVPDAIYEQAAAHLSKNEISAVEWLSVVINAWNRIAISSRYPVKA

Specific function: Unknown

COG id: COG2128

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004675
- InterPro:   IPR003779 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: NA

Molecular weight: Translated: 16384; Mature: 16253

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSERINLGKSAPALYQAVMGLEKLAAEAIASASIPEGFAHLLRLRASQLNQCAFCIRMHT
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
HDALSSGESSDRISVLPAWRETGYFTEKERSSLALVEAITLISEGQVPDAIYEQAAAHLS
HHHHHCCCCCCCEEEEECHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
KNEISAVEWLSVVINAWNRIAISSRYPVKA
HHHHHHHHHHHHHHHHHHHEEECCCCCCCC
>Mature Secondary Structure 
SERINLGKSAPALYQAVMGLEKLAAEAIASASIPEGFAHLLRLRASQLNQCAFCIRMHT
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
HDALSSGESSDRISVLPAWRETGYFTEKERSSLALVEAITLISEGQVPDAIYEQAAAHLS
HHHHHCCCCCCCEEEEECHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
KNEISAVEWLSVVINAWNRIAISSRYPVKA
HHHHHHHHHHHHHHHHHHHEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]