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The map label for this gene is sufD [C]

Identifier: 82701831

GI number: 82701831

Start: 804555

End: 805877

Strand: Direct

Name: sufD [C]

Synonym: Nmul_A0698

Alternate gene names: 82701831

Gene position: 804555-805877 (Clockwise)

Preceding gene: 82701830

Following gene: 82701832

Centisome position: 25.27

GC content: 55.4

Gene sequence:

>1323_bases
ATGAGCATGAGTCTCGTGAATAGCAACAGTTATCTCGAAAGCCTGCTTCAGGGACAACCGCGGCTGCCGCCCAGTCCTCT
CGCCTGGTTTAACCAGCTGCGGGCAAATGCAGTCGATCATGCGGGAAGGCTGAAACTGCCCACAACACGTGATGAGGAGT
GGCGTTTTACTGACCTTTCGCCACTCGTTCGCCACTCGTTCCAGCCTGCTCGTGCTGCACCGGCGTTGCAGACCGCTGAT
GTCGAGCATTTTTCCCTCACGGAAGCTGCTATCAGGCTCGTATTTGTCGACGGCAAATACATGCCGCAACTTTCTACACC
GGCAGAACGTCTCGGAAACCGCGGCTTGATCGTCACCAATCTGTCATCAGCGATAACAGCGAATGCAGAGGCAATAGAGC
CCCATCTGGGTCAGTATGCGCGATTCGAAGGTAACCTGTTCGCGGCACTCAATACCGCATTCCTGCACGACGGGGCGTTG
GTCATCGTACCGCGGGGCGCAGTGATCGACACCCCTGTGCACGTGTTGCTCGTGACAACGCAACCGGAAGTGGCAAGCCA
TCCGCGCTGTCTTTTCATCGCTGAAGCGGGAAGCGAGGTTACCATTCTCGAGGATTACGTCAGCCTGAATGAGGCAATCT
ATGTGACCAATGCGGTGACCGAGATCGCCGTGGGAGATAATGCCCAGATCAGTCACATCCGGGTACAGCGCGACAGTACC
GAAGCATTTCATATCGGGAATTGTGCTGTTTCGCTTGCGCATGCCAGCCGCTACCGTTCTGTTAGCGTAGCGCTCGGGGC
CCGGATTTCACGTTACGATCTGAATACAGCGCTCGCTGCCGAGGGCGCTGAGTGCGTTATCGACGGACTGGCATTGATCA
ATGGTCGGCAGCTGGCCGATACACACAGTTCCATAGATCATGCCCGACCAAATTGTACCAGCCGTCAATTGCATAAATGC
ATCGCTGACGGCAGCGCCCACGCCGTGTTCAACGGCAAGATCATGGTTCGTCCGGGGGCCCAGAATACGGATTCCGCGCA
ATCCAGCCGTAACCTCCTGTTGAATGCGAAGGCGCGTATCGATACCAAGCCGCAGCTCGAAATTTTTGCGGATGACGTGA
AGTGTGCACATGGAGCGACGGTGGGTCAACTCGATAGCGAGGAGTTGTTTTATCTCAAGAGCCGCGGCCTGTCCGAAGTT
GCGGCGCGAAATCTGCTGACTTATGCGTTTGGTGCGGAGATCATTGATCGTATTCCTATCGCATCGCTCAAATACCGGCT
TGAACGGACAGTGCTGGAACAAACCAAAAAAACTGAGCCATGA

Upstream 100 bases:

>100_bases
GCGGACGCATCGTTAAAACAGGCGGCAAAGAGCTGGCGCTCGATCTCGAAACGCGAGGTTACGACTGGGTAGGGGTTGAG
CGACGTGTTTCGGCAAGCGC

Downstream 100 bases:

>100_bases
AAATCATAGATTCCACGCTGCAACCTCAGATTGATTCGACGCTCGACGTCGCACGTGTGCGTGCCGATTTTCCGATTCTG
GAGCTTCAGGTCGAAGGAAA

Product: FeS assembly protein SufD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 440; Mature: 439

Protein sequence:

>440_residues
MSMSLVNSNSYLESLLQGQPRLPPSPLAWFNQLRANAVDHAGRLKLPTTRDEEWRFTDLSPLVRHSFQPARAAPALQTAD
VEHFSLTEAAIRLVFVDGKYMPQLSTPAERLGNRGLIVTNLSSAITANAEAIEPHLGQYARFEGNLFAALNTAFLHDGAL
VIVPRGAVIDTPVHVLLVTTQPEVASHPRCLFIAEAGSEVTILEDYVSLNEAIYVTNAVTEIAVGDNAQISHIRVQRDST
EAFHIGNCAVSLAHASRYRSVSVALGARISRYDLNTALAAEGAECVIDGLALINGRQLADTHSSIDHARPNCTSRQLHKC
IADGSAHAVFNGKIMVRPGAQNTDSAQSSRNLLLNAKARIDTKPQLEIFADDVKCAHGATVGQLDSEELFYLKSRGLSEV
AARNLLTYAFGAEIIDRIPIASLKYRLERTVLEQTKKTEP

Sequences:

>Translated_440_residues
MSMSLVNSNSYLESLLQGQPRLPPSPLAWFNQLRANAVDHAGRLKLPTTRDEEWRFTDLSPLVRHSFQPARAAPALQTAD
VEHFSLTEAAIRLVFVDGKYMPQLSTPAERLGNRGLIVTNLSSAITANAEAIEPHLGQYARFEGNLFAALNTAFLHDGAL
VIVPRGAVIDTPVHVLLVTTQPEVASHPRCLFIAEAGSEVTILEDYVSLNEAIYVTNAVTEIAVGDNAQISHIRVQRDST
EAFHIGNCAVSLAHASRYRSVSVALGARISRYDLNTALAAEGAECVIDGLALINGRQLADTHSSIDHARPNCTSRQLHKC
IADGSAHAVFNGKIMVRPGAQNTDSAQSSRNLLLNAKARIDTKPQLEIFADDVKCAHGATVGQLDSEELFYLKSRGLSEV
AARNLLTYAFGAEIIDRIPIASLKYRLERTVLEQTKKTEP
>Mature_439_residues
SMSLVNSNSYLESLLQGQPRLPPSPLAWFNQLRANAVDHAGRLKLPTTRDEEWRFTDLSPLVRHSFQPARAAPALQTADV
EHFSLTEAAIRLVFVDGKYMPQLSTPAERLGNRGLIVTNLSSAITANAEAIEPHLGQYARFEGNLFAALNTAFLHDGALV
IVPRGAVIDTPVHVLLVTTQPEVASHPRCLFIAEAGSEVTILEDYVSLNEAIYVTNAVTEIAVGDNAQISHIRVQRDSTE
AFHIGNCAVSLAHASRYRSVSVALGARISRYDLNTALAAEGAECVIDGLALINGRQLADTHSSIDHARPNCTSRQLHKCI
ADGSAHAVFNGKIMVRPGAQNTDSAQSSRNLLLNAKARIDTKPQLEIFADDVKCAHGATVGQLDSEELFYLKSRGLSEVA
ARNLLTYAFGAEIIDRIPIASLKYRLERTVLEQTKKTEP

Specific function: FhuF function [C]

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI1787971, Length=390, Percent_Identity=33.5897435897436, Blast_Score=209, Evalue=3e-55,
Organism=Escherichia coli, GI87081955, Length=328, Percent_Identity=23.1707317073171, Blast_Score=103, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000825
- InterPro:   IPR011542 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 47884; Mature: 47753

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMSLVNSNSYLESLLQGQPRLPPSPLAWFNQLRANAVDHAGRLKLPTTRDEEWRFTDLS
CCCEEECCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEECCCCCCCCEEECCCC
PLVRHSFQPARAAPALQTADVEHFSLTEAAIRLVFVDGKYMPQLSTPAERLGNRGLIVTN
HHHHCCCCCCCCCCCCCCCCCCHHEECCEEEEEEEECCCCCCCCCCCHHHHCCCCEEEEE
LSSAITANAEAIEPHLGQYARFEGNLFAALNTAFLHDGALVIVPRGAVIDTPVHVLLVTT
CCHHHCCCCHHHCHHHCCCEEECCCEEEEEEEHEEECCEEEEEECCCEECCCEEEEEEEC
QPEVASHPRCLFIAEAGSEVTILEDYVSLNEAIYVTNAVTEIAVGDNAQISHIRVQRDST
CCHHHCCCCEEEEEECCCEEEEEHHHHCCCCEEEEEECEEEEEECCCCEEEEEEEECCCC
EAFHIGNCAVSLAHASRYRSVSVALGARISRYDLNTALAAEGAECVIDGLALINGRQLAD
CEEEECCCEEEHHHHHHHCEEEEECCCEEEEEECCHHHHCCCCHHEEEHHHHCCCCCCCC
THSSIDHARPNCTSRQLHKCIADGSAHAVFNGKIMVRPGAQNTDSAQSSRNLLLNAKARI
HHHHHHHCCCCCCHHHHHHHHHCCCEEEEEECEEEECCCCCCCCCHHCCCCEEEEECCCC
DTKPQLEIFADDVKCAHGATVGQLDSEELFYLKSRGLSEVAARNLLTYAFGAEIIDRIPI
CCCCCEEEEECCHHHCCCCCCCCCCCCCEEEEHHCCHHHHHHHHHHHHHHHHHHHHHCCH
ASLKYRLERTVLEQTKKTEP
HHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SMSLVNSNSYLESLLQGQPRLPPSPLAWFNQLRANAVDHAGRLKLPTTRDEEWRFTDLS
CCEEECCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEECCCCCCCCEEECCCC
PLVRHSFQPARAAPALQTADVEHFSLTEAAIRLVFVDGKYMPQLSTPAERLGNRGLIVTN
HHHHCCCCCCCCCCCCCCCCCCHHEECCEEEEEEEECCCCCCCCCCCHHHHCCCCEEEEE
LSSAITANAEAIEPHLGQYARFEGNLFAALNTAFLHDGALVIVPRGAVIDTPVHVLLVTT
CCHHHCCCCHHHCHHHCCCEEECCCEEEEEEEHEEECCEEEEEECCCEECCCEEEEEEEC
QPEVASHPRCLFIAEAGSEVTILEDYVSLNEAIYVTNAVTEIAVGDNAQISHIRVQRDST
CCHHHCCCCEEEEEECCCEEEEEHHHHCCCCEEEEEECEEEEEECCCCEEEEEEEECCCC
EAFHIGNCAVSLAHASRYRSVSVALGARISRYDLNTALAAEGAECVIDGLALINGRQLAD
CEEEECCCEEEHHHHHHHCEEEEECCCEEEEEECCHHHHCCCCHHEEEHHHHCCCCCCCC
THSSIDHARPNCTSRQLHKCIADGSAHAVFNGKIMVRPGAQNTDSAQSSRNLLLNAKARI
HHHHHHHCCCCCCHHHHHHHHHCCCEEEEEECEEEECCCCCCCCCHHCCCCEEEEECCCC
DTKPQLEIFADDVKCAHGATVGQLDSEELFYLKSRGLSEVAARNLLTYAFGAEIIDRIPI
CCCCCEEEEECCHHHCCCCCCCCCCCCCEEEEHHCCHHHHHHHHHHHHHHHHHHHHHCCH
ASLKYRLERTVLEQTKKTEP
HHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]