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The map label for this gene is sufC [C]

Identifier: 82701830

GI number: 82701830

Start: 803770

End: 804558

Strand: Direct

Name: sufC [C]

Synonym: Nmul_A0697

Alternate gene names: 82701830

Gene position: 803770-804558 (Clockwise)

Preceding gene: 82701829

Following gene: 82701831

Centisome position: 25.24

GC content: 52.72

Gene sequence:

>789_bases
ATGATTCATCAGGACAGCAAAACGATTCTGGAAGTAAGCGGACTGCGAGCGGCAGTCGAGGGCGTAGAGATACTCAAGGG
CGTTGACCTCGTCGTTAAAAGAGGTGAGGTGCATGCCATCATGGGAACGAACGGCTCAGGCAAGAGCACTTTCGCCAAGG
TGCTTGCCGGTCACAGCGCCTATCAGGTTACCGGAGGATCGGTGTTGTTTGAAGGCCGGAATCTGTTCGATTTAGAACCG
GAAGAACGGGCGCGTGCAGGTGTATTTCTTGCCTTTCAGTATCCGATCGAGATACCCGGTGTTTCCAACAGTCATTTCCT
GCGCCTTGCCTACAATACCCTGCAATCGCAGCGTGGAAAGGACGAACTCGATCCCCTGGAATTCGAGGATTTCGTGCGCG
AGAAAATGAAATTGCTGGAGATGAATCCCAATTTCCTGGATCGCGGCGTCAACGAAGGTTTTTCGGGTGGCGAGAAGAAG
CGCAACGAGATATTGCAGATGGCGCTGCTGGAACCACGACTGGCTATCCTGGATGAGACGGATTCCGGTCTCGACATCGA
TGCCCTGCGAATCGTTACCAATGGGGTAAACAAACTTGCAACCAAGGACAATGCAATCATTCTGGTAACCCATTATCAGC
GCATGCTCAACTATATCGAACCGGATTACGTGCATGTAATGCGCAGCGGACGCATCGTTAAAACAGGCGGCAAAGAGCTG
GCGCTCGATCTCGAAACGCGAGGTTACGACTGGGTAGGGGTTGAGCGACGTGTTTCGGCAAGCGCATGA

Upstream 100 bases:

>100_bases
TTATCAACGGCTTCTGCAAAGATGTATTTCAGCAACTGCCGATGGAATTTGCGGTCGAAGCGACAAAACTGCTTGGATTC
AAACTGGAGGGAAGTGTTGG

Downstream 100 bases:

>100_bases
GCATGAGTCTCGTGAATAGCAACAGTTATCTCGAAAGCCTGCTTCAGGGACAACCGCGGCTGCCGCCCAGTCCTCTCGCC
TGGTTTAACCAGCTGCGGGC

Product: FeS assembly ATPase SufC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MIHQDSKTILEVSGLRAAVEGVEILKGVDLVVKRGEVHAIMGTNGSGKSTFAKVLAGHSAYQVTGGSVLFEGRNLFDLEP
EERARAGVFLAFQYPIEIPGVSNSHFLRLAYNTLQSQRGKDELDPLEFEDFVREKMKLLEMNPNFLDRGVNEGFSGGEKK
RNEILQMALLEPRLAILDETDSGLDIDALRIVTNGVNKLATKDNAIILVTHYQRMLNYIEPDYVHVMRSGRIVKTGGKEL
ALDLETRGYDWVGVERRVSASA

Sequences:

>Translated_262_residues
MIHQDSKTILEVSGLRAAVEGVEILKGVDLVVKRGEVHAIMGTNGSGKSTFAKVLAGHSAYQVTGGSVLFEGRNLFDLEP
EERARAGVFLAFQYPIEIPGVSNSHFLRLAYNTLQSQRGKDELDPLEFEDFVREKMKLLEMNPNFLDRGVNEGFSGGEKK
RNEILQMALLEPRLAILDETDSGLDIDALRIVTNGVNKLATKDNAIILVTHYQRMLNYIEPDYVHVMRSGRIVKTGGKEL
ALDLETRGYDWVGVERRVSASA
>Mature_262_residues
MIHQDSKTILEVSGLRAAVEGVEILKGVDLVVKRGEVHAIMGTNGSGKSTFAKVLAGHSAYQVTGGSVLFEGRNLFDLEP
EERARAGVFLAFQYPIEIPGVSNSHFLRLAYNTLQSQRGKDELDPLEFEDFVREKMKLLEMNPNFLDRGVNEGFSGGEKK
RNEILQMALLEPRLAILDETDSGLDIDALRIVTNGVNKLATKDNAIILVTHYQRMLNYIEPDYVHVMRSGRIVKTGGKEL
ALDLETRGYDWVGVERRVSASA

Specific function: Unknown

COG id: COG0396

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, ATPase component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Escherichia coli, GI1787972, Length=244, Percent_Identity=57.3770491803279, Blast_Score=290, Evalue=5e-80,
Organism=Escherichia coli, GI1787500, Length=252, Percent_Identity=29.7619047619048, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1787792, Length=244, Percent_Identity=27.8688524590164, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1786698, Length=218, Percent_Identity=28.4403669724771, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1790525, Length=231, Percent_Identity=28.5714285714286, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI1789891, Length=222, Percent_Identity=29.7297297297297, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1790190, Length=229, Percent_Identity=27.0742358078603, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI48994883, Length=254, Percent_Identity=28.740157480315, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI48995001, Length=239, Percent_Identity=25.9414225941423, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI87081791, Length=242, Percent_Identity=26.0330578512397, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1789864, Length=244, Percent_Identity=26.2295081967213, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1786319, Length=192, Percent_Identity=30.2083333333333, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1788210, Length=232, Percent_Identity=25.4310344827586, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI1788472, Length=228, Percent_Identity=25.4385964912281, Blast_Score=61, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI17541710, Length=216, Percent_Identity=25.462962962963, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI212646699, Length=240, Percent_Identity=27.5, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI71996809, Length=239, Percent_Identity=27.6150627615063, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI193209708, Length=219, Percent_Identity=27.8538812785388, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI25146777, Length=237, Percent_Identity=27.4261603375527, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI193211017, Length=239, Percent_Identity=27.1966527196653, Blast_Score=64, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI193211015, Length=239, Percent_Identity=27.1966527196653, Blast_Score=64, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR010230 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 29104; Mature: 29104

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHQDSKTILEVSGLRAAVEGVEILKGVDLVVKRGEVHAIMGTNGSGKSTFAKVLAGHSA
CCCCCCCCEEEHHHHHHHHHHHHHHHCHHHEEECCCEEEEEECCCCCHHHHHHHHHCCCE
YQVTGGSVLFEGRNLFDLEPEERARAGVFLAFQYPIEIPGVSNSHFLRLAYNTLQSQRGK
EEEECCEEEECCCCEECCCHHHHHCCCEEEEEECCEECCCCCCCCEEEEEHHHHHHHCCC
DELDPLEFEDFVREKMKLLEMNPNFLDRGVNEGFSGGEKKRNEILQMALLEPRLAILDET
CCCCCCCHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECC
DSGLDIDALRIVTNGVNKLATKDNAIILVTHYQRMLNYIEPDYVHVMRSGRIVKTGGKEL
CCCCCHHHHHHHHHCHHHHHCCCCEEEEEEEHHHHHHHCCCHHHHHHHCCEEEEECCCEE
ALDLETRGYDWVGVERRVSASA
EEEEECCCCCEECCCCCCCCCC
>Mature Secondary Structure
MIHQDSKTILEVSGLRAAVEGVEILKGVDLVVKRGEVHAIMGTNGSGKSTFAKVLAGHSA
CCCCCCCCEEEHHHHHHHHHHHHHHHCHHHEEECCCEEEEEECCCCCHHHHHHHHHCCCE
YQVTGGSVLFEGRNLFDLEPEERARAGVFLAFQYPIEIPGVSNSHFLRLAYNTLQSQRGK
EEEECCEEEECCCCEECCCHHHHHCCCEEEEEECCEECCCCCCCCEEEEEHHHHHHHCCC
DELDPLEFEDFVREKMKLLEMNPNFLDRGVNEGFSGGEKKRNEILQMALLEPRLAILDET
CCCCCCCHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECC
DSGLDIDALRIVTNGVNKLATKDNAIILVTHYQRMLNYIEPDYVHVMRSGRIVKTGGKEL
CCCCCHHHHHHHHHCHHHHHCCCCEEEEEEEHHHHHHHCCCHHHHHHHCCEEEEECCCEE
ALDLETRGYDWVGVERRVSASA
EEEEECCCCCEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]