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The map label for this gene is psbT

Identifier: 78778705

GI number: 78778705

Start: 305448

End: 305546

Strand: Reverse

Name: psbT

Synonym: PMT9312_0320

Alternate gene names: 78778705

Gene position: 305546-305448 (Counterclockwise)

Preceding gene: 78778706

Following gene: 78778704

Centisome position: 17.88

GC content: 38.38

Gene sequence:

>99_bases
ATGGAAGCTTTTGCTTACGTTCTTATTTTAACTCTCGCAGTTGTAACACTATTCTTTGCTGTCGCCTTTAGAGACCCGCC
TAAATTTGACAGAAAATGA

Upstream 100 bases:

>100_bases
TTGGTGACCAAGTTGAATTTGGTTTATTCAAGAAACTTGGTGATGAAACCACAAGAAGAATCCCAGGAAGGGTTTAAACT
AAACTTTATTAATTAATCTT

Downstream 100 bases:

>100_bases
ACTTAGAAAAAAAAACCTCTTTAACAAGAGGTTTTTTTTTACTTTTCATAATTAAGATATTACTCTAATATGAGAATTAA
AGATTACCTTATTTCACTAA

Product: photosystem II reaction center protein T

Products: NA

Alternate protein names: PSII-T

Number of amino acids: Translated: 32; Mature: 32

Protein sequence:

>32_residues
MEAFAYVLILTLAVVTLFFAVAFRDPPKFDRK

Sequences:

>Translated_32_residues
MEAFAYVLILTLAVVTLFFAVAFRDPPKFDRK
>Mature_32_residues
MEAFAYVLILTLAVVTLFFAVAFRDPPKFDRK

Specific function: Seems to play a role in the dimerization of PSII

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the psbT family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PSBT_PROM0 (A3PB37)

Other databases:

- EMBL:   CP000576
- RefSeq:   YP_001090563.1
- STRING:   A3PB37
- GeneID:   4912482
- GenomeReviews:   CP000576_GR
- KEGG:   pmg:P9301_03391
- HOGENOM:   HBG710454
- ProtClustDB:   PRK11875
- GO:   GO:0015979
- HAMAP:   MF_00808
- InterPro:   IPR001743
- ProDom:   PD004453

Pfam domain/function: PF01405 PsbT

EC number: NA

Molecular weight: Translated: 3690; Mature: 3690

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x110e3bd0)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAFAYVLILTLAVVTLFFAVAFRDPPKFDRK
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
>Mature Secondary Structure
MEAFAYVLILTLAVVTLFFAVAFRDPPKFDRK
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA