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The map label for this gene is yrbH [C]

Identifier: 78484848

GI number: 78484848

Start: 563468

End: 564403

Strand: Reverse

Name: yrbH [C]

Synonym: Tcr_0503

Alternate gene names: 78484848

Gene position: 564403-563468 (Counterclockwise)

Preceding gene: 78484849

Following gene: 78484847

Centisome position: 23.25

GC content: 45.19

Gene sequence:

>936_bases
ATGGATACTTTAACGATTGCCAAACGCGTTTTCGACATTGAAGCAGAAGCCGTTTACCACCTCAAAACATTGCTTGATGA
AAATTTTTCTCAAAGTGTTGATGCCATTTTAGCCACCGAAGGTCGCGTCGTTATTTGTGGGATGGGAAAATCCGGTCTCA
TTGGCAAAAAAATTATGGCCACACTGGCCAGCACAGGCACACCTTGTTTTTTTATGCACCCTGGCGAAGCATTCCATGGT
GATTTGGGGATGGTTTCACCCAAAGATGTCTTTATTGCGCTCTCTAATTCAGGGGAAACGGAAGAAGTCATCAAACTAAT
CCCTTTTTTAAAGGACAATGGCAACACGATTATTTCCATGACTGGTCGACCTGACTCCACCTTAGCAAAAAATTCAAATT
TCCATTTGAATATCGCCGTGCCACAAGAAGCTTGCCCGCACCAACTGGCTCCTACCTCCTCCACTACAGCCACGCTTGTC
ATGGGCGATGCTCTGGCAGTGGCGTTAATGGAAAAGCGTGATTTTCAACCACAGGATTTTGCTCGTTTCCATCCCGGCGG
CAGCTTAGGCCGTAAGCTTCTAACGCGTGTAAAACATGAAATGAAATCGGAAAACCTGCCTTTTGTTGAAAAATCCGCCT
CCATGAAAGACGTCATTCACACCATGACGGATGGCCGTCTGGGGCTGTGCATTGTCAACCAAGGAGAAGGCATCATTACC
GATGGCGACTTACGTCGTCAGATGGAAGAAGATCCTGCAAACTTTATGCAAAAAACCGCTGGTGACATCATGGGAACACA
CCCTAAAATGATCGATTCAGAAGCACGGCTATCCGATGCGGAAGAAATGATGACGCAGAAAAAAATCACCTCTTTACTTG
TGTCTGATCAGAACCAGGTTGTGGGCGTCATTCAAATTTACGATTTAAATAATTAA

Upstream 100 bases:

>100_bases
ATTACCCAACCCGGGAACCGATTTCCACAATTTACATTTAGGCCTTAAATTTTAAAGGCCGACATTCAACCGACAACAAC
GAGAAGTTTACAGACACATT

Downstream 100 bases:

>100_bases
TTACGGGTTGTCTTCATGTCTTTATGGCTCTACCGTTTCTTGCTTCTACTCGCATCACCAGTAATCGTCTATTCTGGCTG
GAAGCGATGCCATCGAGCCA

Product: KpsF/GutQ family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MDTLTIAKRVFDIEAEAVYHLKTLLDENFSQSVDAILATEGRVVICGMGKSGLIGKKIMATLASTGTPCFFMHPGEAFHG
DLGMVSPKDVFIALSNSGETEEVIKLIPFLKDNGNTIISMTGRPDSTLAKNSNFHLNIAVPQEACPHQLAPTSSTTATLV
MGDALAVALMEKRDFQPQDFARFHPGGSLGRKLLTRVKHEMKSENLPFVEKSASMKDVIHTMTDGRLGLCIVNQGEGIIT
DGDLRRQMEEDPANFMQKTAGDIMGTHPKMIDSEARLSDAEEMMTQKKITSLLVSDQNQVVGVIQIYDLNN

Sequences:

>Translated_311_residues
MDTLTIAKRVFDIEAEAVYHLKTLLDENFSQSVDAILATEGRVVICGMGKSGLIGKKIMATLASTGTPCFFMHPGEAFHG
DLGMVSPKDVFIALSNSGETEEVIKLIPFLKDNGNTIISMTGRPDSTLAKNSNFHLNIAVPQEACPHQLAPTSSTTATLV
MGDALAVALMEKRDFQPQDFARFHPGGSLGRKLLTRVKHEMKSENLPFVEKSASMKDVIHTMTDGRLGLCIVNQGEGIIT
DGDLRRQMEEDPANFMQKTAGDIMGTHPKMIDSEARLSDAEEMMTQKKITSLLVSDQNQVVGVIQIYDLNN
>Mature_311_residues
MDTLTIAKRVFDIEAEAVYHLKTLLDENFSQSVDAILATEGRVVICGMGKSGLIGKKIMATLASTGTPCFFMHPGEAFHG
DLGMVSPKDVFIALSNSGETEEVIKLIPFLKDNGNTIISMTGRPDSTLAKNSNFHLNIAVPQEACPHQLAPTSSTTATLV
MGDALAVALMEKRDFQPQDFARFHPGGSLGRKLLTRVKHEMKSENLPFVEKSASMKDVIHTMTDGRLGLCIVNQGEGIIT
DGDLRRQMEEDPANFMQKTAGDIMGTHPKMIDSEARLSDAEEMMTQKKITSLLVSDQNQVVGVIQIYDLNN

Specific function: Unknown

COG id: COG0794

COG function: function code M; Predicted sugar phosphate isomerase involved in capsule formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

Organism=Escherichia coli, GI1789588, Length=307, Percent_Identity=46.9055374592834, Blast_Score=275, Evalue=2e-75,
Organism=Escherichia coli, GI87082151, Length=312, Percent_Identity=42.3076923076923, Blast_Score=240, Evalue=1e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644
- InterPro:   IPR004800
- InterPro:   IPR001347 [H]

Pfam domain/function: PF00571 CBS; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 33941; Mature: 33941

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTLTIAKRVFDIEAEAVYHLKTLLDENFSQSVDAILATEGRVVICGMGKSGLIGKKIMA
CCHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHEECCCCEEEEECCCCCCHHHHHHH
TLASTGTPCFFMHPGEAFHGDLGMVSPKDVFIALSNSGETEEVIKLIPFLKDNGNTIISM
HHHCCCCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEE
TGRPDSTLAKNSNFHLNIAVPQEACPHQLAPTSSTTATLVMGDALAVALMEKRDFQPQDF
CCCCCCHHCCCCCEEEEEECCHHCCCCCCCCCCCCEEEEEEHHHHHHHHHHHCCCCCCHH
ARFHPGGSLGRKLLTRVKHEMKSENLPFVEKSASMKDVIHTMTDGRLGLCIVNQGEGIIT
HHCCCCHHHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHCCCCEEEEEEECCCCEEE
DGDLRRQMEEDPANFMQKTAGDIMGTHPKMIDSEARLSDAEEMMTQKKITSLLVSDQNQV
CHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCE
VGVIQIYDLNN
EEEEEEEECCC
>Mature Secondary Structure
MDTLTIAKRVFDIEAEAVYHLKTLLDENFSQSVDAILATEGRVVICGMGKSGLIGKKIMA
CCHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHEECCCCEEEEECCCCCCHHHHHHH
TLASTGTPCFFMHPGEAFHGDLGMVSPKDVFIALSNSGETEEVIKLIPFLKDNGNTIISM
HHHCCCCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEE
TGRPDSTLAKNSNFHLNIAVPQEACPHQLAPTSSTTATLVMGDALAVALMEKRDFQPQDF
CCCCCCHHCCCCCEEEEEECCHHCCCCCCCCCCCCEEEEEEHHHHHHHHHHHCCCCCCHH
ARFHPGGSLGRKLLTRVKHEMKSENLPFVEKSASMKDVIHTMTDGRLGLCIVNQGEGIIT
HHCCCCHHHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHCCCCEEEEEEECCCCEEE
DGDLRRQMEEDPANFMQKTAGDIMGTHPKMIDSEARLSDAEEMMTQKKITSLLVSDQNQV
CHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCE
VGVIQIYDLNN
EEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]