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The map label for this gene is 78484849

Identifier: 78484849

GI number: 78484849

Start: 564449

End: 565105

Strand: Reverse

Name: 78484849

Synonym: Tcr_0504

Alternate gene names: NA

Gene position: 565105-564449 (Counterclockwise)

Preceding gene: 78484871

Following gene: 78484848

Centisome position: 23.28

GC content: 42.31

Gene sequence:

>657_bases
ATGTTCATTTTTAAAAGGCTCAAACCGCCATTTCTTTTCATCTGCACACTCTTCGTGCTATCCACTTCGAATCTACGTGC
CGCGGATACATCAAATGACATGATGATGAACCTGACAATCTTAGGTGCCATCGGTTCGTTAAGTTATGCGTGCATTGAAG
GAAAAGGCCCTTGTTCACTTGACCCTTTAAACACAGATCGCTTAACCTTAAGCTTGGATATCGGGGCTGATAACAGCATC
CATAATGAACGCATTGCACTTGGCGCTAACTGGCATGAAGCCCTGTTTGAAAATAAACATTTTGAGATTAGCGGTCGCTG
GGAAGTCAATGTCAACAGATGGCATTCTTCAAAGAGCCATCCTCTAAATAAAAGCGGCTACATAGTTGGTCTGACGCCGG
TATTCAATTACACTTGGAAAACGGGAAGTGTCAAACCGTTTTTAGAGCTTGGCGGCGGGCCACAATATTTATCCGACGTC
ACAATAGAAAACGAATTTAAATCGACGCAATTTCAATTTGGAAGCATTTTAGGGCTCGGCATTCAGACAGACCGTTTTGA
AATCGGCTATCGCTATCTGCACATTTCAAATGCCAATATTGAATTACCCAACCCGGGAACCGATTTCCACAATTTACATT
TAGGCCTTAAATTTTAA

Upstream 100 bases:

>100_bases
TTGGAAAAATCGTGCATATTCATGAGTTGATTAGATTAAAATATTGATAAATTTTATTATGATAAAAACTAAGTTATAAG
TCTAACAGGATTCGTATTTA

Downstream 100 bases:

>100_bases
AGGCCGACATTCAACCGACAACAACGAGAAGTTTACAGACACATTATGGATACTTTAACGATTGCCAAACGCGTTTTCGA
CATTGAAGCAGAAGCCGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MFIFKRLKPPFLFICTLFVLSTSNLRAADTSNDMMMNLTILGAIGSLSYACIEGKGPCSLDPLNTDRLTLSLDIGADNSI
HNERIALGANWHEALFENKHFEISGRWEVNVNRWHSSKSHPLNKSGYIVGLTPVFNYTWKTGSVKPFLELGGGPQYLSDV
TIENEFKSTQFQFGSILGLGIQTDRFEIGYRYLHISNANIELPNPGTDFHNLHLGLKF

Sequences:

>Translated_218_residues
MFIFKRLKPPFLFICTLFVLSTSNLRAADTSNDMMMNLTILGAIGSLSYACIEGKGPCSLDPLNTDRLTLSLDIGADNSI
HNERIALGANWHEALFENKHFEISGRWEVNVNRWHSSKSHPLNKSGYIVGLTPVFNYTWKTGSVKPFLELGGGPQYLSDV
TIENEFKSTQFQFGSILGLGIQTDRFEIGYRYLHISNANIELPNPGTDFHNLHLGLKF
>Mature_218_residues
MFIFKRLKPPFLFICTLFVLSTSNLRAADTSNDMMMNLTILGAIGSLSYACIEGKGPCSLDPLNTDRLTLSLDIGADNSI
HNERIALGANWHEALFENKHFEISGRWEVNVNRWHSSKSHPLNKSGYIVGLTPVFNYTWKTGSVKPFLELGGGPQYLSDV
TIENEFKSTQFQFGSILGLGIQTDRFEIGYRYLHISNANIELPNPGTDFHNLHLGLKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24457; Mature: 24457

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFIFKRLKPPFLFICTLFVLSTSNLRAADTSNDMMMNLTILGAIGSLSYACIEGKGPCSL
CEEHHHCCCCHHHHHHHHHHCCCCCEECCCCCCEEEEEEEEEECCCCEEEEECCCCCCCC
DPLNTDRLTLSLDIGADNSIHNERIALGANWHEALFENKHFEISGRWEVNVNRWHSSKSH
CCCCCCEEEEEEECCCCCCCCCCEEEECCCHHHHHHCCCCEEEEEEEEEEEEEECCCCCC
PLNKSGYIVGLTPVFNYTWKTGSVKPFLELGGGPQYLSDVTIENEFKSTQFQFGSILGLG
CCCCCCEEEEEEEEEEEEECCCCCCCCEEECCCHHHHEEEEECCCCCCCEEEECEEEEEC
IQTDRFEIGYRYLHISNANIELPNPGTDFHNLHLGLKF
EECCEEEEEEEEEEEECCEEECCCCCCCCEEEEEEEEC
>Mature Secondary Structure
MFIFKRLKPPFLFICTLFVLSTSNLRAADTSNDMMMNLTILGAIGSLSYACIEGKGPCSL
CEEHHHCCCCHHHHHHHHHHCCCCCEECCCCCCEEEEEEEEEECCCCEEEEECCCCCCCC
DPLNTDRLTLSLDIGADNSIHNERIALGANWHEALFENKHFEISGRWEVNVNRWHSSKSH
CCCCCCEEEEEEECCCCCCCCCCEEEECCCHHHHHHCCCCEEEEEEEEEEEEEECCCCCC
PLNKSGYIVGLTPVFNYTWKTGSVKPFLELGGGPQYLSDVTIENEFKSTQFQFGSILGLG
CCCCCCEEEEEEEEEEEEECCCCCCCCEEECCCHHHHEEEEECCCCCCCEEEECEEEEEC
IQTDRFEIGYRYLHISNANIELPNPGTDFHNLHLGLKF
EECCEEEEEEEEEEEECCEEECCCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA