| Definition | Thiomicrospira crunogena XCL-2, complete genome. |
|---|---|
| Accession | NC_007520 |
| Length | 2,427,734 |
Click here to switch to the map view.
The map label for this gene is aroQ
Identifier: 78484790
GI number: 78484790
Start: 497702
End: 498136
Strand: Reverse
Name: aroQ
Synonym: Tcr_0445
Alternate gene names: 78484790
Gene position: 498136-497702 (Counterclockwise)
Preceding gene: 78484791
Following gene: 78484789
Centisome position: 20.52
GC content: 45.98
Gene sequence:
>435_bases ATGGCAAACATTCTCGTAATCAACGGCCCCAATCTCAATATGCTAGGCAAAAGAGAACCGGAACATTATGGTCGCCAAAC CTTGGGCGACATTATCGAGGAACTCGAAACACTTGCAGATGATTATGAAGTGCGTTTATACAACTTCCAGAGCAATGCCG AGCACGAAATAGTGGAACGCATCCAGACCGCGATTGACGATATTGATTTCATTATCATCAACCCTGCGGCGTTCACACAC ACCAGTGTCGCGATACGAGACGCCTTATCGACCGTCAAGATCCCTTTTATTGAAGTGCATTTGTCTAACATTCATAAAAG AGAAGCTTTTCGAACCCATTCATATTTTTCCGATTTGGCTGAAGGCGTTATTGCCGGGCTAGGTCCAATCGGCTACCAGC TCGCACTGGCCGCCGCAGTTGAAAAACTGAAATAA
Upstream 100 bases:
>100_bases CGACTTTTTTACAACTTTCTATATCGTTAAACCTAACTTTCAGGTATAATTTTCAACAATTTAATGATTAGCTCCGCTGA GATGAATCAAGGATACTTTC
Downstream 100 bases:
>100_bases AAAAATACATTTAAATAACGACTATTTAAGAGGAATAGAGAACATGGATATTCGTTCAATTCGTAAATTGATTGAAATTG TAGAACAGTCTGACGTTGCT
Product: 3-dehydroquinate dehydratase
Products: NA
Alternate protein names: 3-dehydroquinase; Type II DHQase
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MANILVINGPNLNMLGKREPEHYGRQTLGDIIEELETLADDYEVRLYNFQSNAEHEIVERIQTAIDDIDFIIINPAAFTH TSVAIRDALSTVKIPFIEVHLSNIHKREAFRTHSYFSDLAEGVIAGLGPIGYQLALAAAVEKLK
Sequences:
>Translated_144_residues MANILVINGPNLNMLGKREPEHYGRQTLGDIIEELETLADDYEVRLYNFQSNAEHEIVERIQTAIDDIDFIIINPAAFTH TSVAIRDALSTVKIPFIEVHLSNIHKREAFRTHSYFSDLAEGVIAGLGPIGYQLALAAAVEKLK >Mature_143_residues ANILVINGPNLNMLGKREPEHYGRQTLGDIIEELETLADDYEVRLYNFQSNAEHEIVERIQTAIDDIDFIIINPAAFTHT SVAIRDALSTVKIPFIEVHLSNIHKREAFRTHSYFSDLAEGVIAGLGPIGYQLALAAAVEKLK
Specific function: Catalyzes a trans-dehydration via an enolate intermediate
COG id: COG0757
COG function: function code E; 3-dehydroquinate dehydratase II
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the type-II 3-dehydroquinase family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): AROQ_THICR (Q31II2)
Other databases:
- EMBL: CP000109 - RefSeq: YP_390715.1 - HSSP: Q48255 - ProteinModelPortal: Q31II2 - SMR: Q31II2 - STRING: Q31II2 - GeneID: 3761472 - GenomeReviews: CP000109_GR - KEGG: tcx:Tcr_0445 - NMPDR: fig|317025.3.peg.623 - eggNOG: COG0757 - HOGENOM: HBG284657 - OMA: TFQSNHE - ProtClustDB: PRK05395 - BioCyc: TCRU317025:TCR_0445-MONOMER - HAMAP: MF_00169 - InterPro: IPR001874 - InterPro: IPR018509 - Gene3D: G3DSA:3.40.50.9100 - PANTHER: PTHR21272 - PIRSF: PIRSF001399 - ProDom: PD004527 - TIGRFAMs: TIGR01088
Pfam domain/function: PF01220 DHquinase_II; SSF52304 DHquinase_II
EC number: =4.2.1.10
Molecular weight: Translated: 16101; Mature: 15969
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: PS01029 DEHYDROQUINASE_II
Important sites: ACT_SITE 23-23 ACT_SITE 100-100 BINDING 74-74 BINDING 80-80 BINDING 87-87 BINDING 111-111
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANILVINGPNLNMLGKREPEHYGRQTLGDIIEELETLADDYEVRLYNFQSNAEHEIVER CCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHH IQTAIDDIDFIIINPAAFTHTSVAIRDALSTVKIPFIEVHLSNIHKREAFRTHSYFSDLA HHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCHHEEEEHHHHHHHHHHHHHHHHHHHH EGVIAGLGPIGYQLALAAAVEKLK HHHHHCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure ANILVINGPNLNMLGKREPEHYGRQTLGDIIEELETLADDYEVRLYNFQSNAEHEIVER CCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHH IQTAIDDIDFIIINPAAFTHTSVAIRDALSTVKIPFIEVHLSNIHKREAFRTHSYFSDLA HHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCHHEEEEHHHHHHHHHHHHHHHHHHHH EGVIAGLGPIGYQLALAAAVEKLK HHHHHCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA