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The map label for this gene is 78484720

Identifier: 78484720

GI number: 78484720

Start: 423473

End: 424939

Strand: Reverse

Name: 78484720

Synonym: Tcr_0375

Alternate gene names: NA

Gene position: 424939-423473 (Counterclockwise)

Preceding gene: 78484721

Following gene: 78484708

Centisome position: 17.5

GC content: 36.4

Gene sequence:

>1467_bases
ATGAAGCTTTTATTTTCAGATTCGAGAAAACCAGATGAATGCGTTGCAAGCTATCTCATTAGAACGGCTGAAAATAACGG
CTTCAGAAGAGTCAGTCATCTTTTAAACCATACAGATTTGCACTGGAAAAATAGCCGTTTACCAATTCCCACTATTCTTT
CTGGAAAAGTCGAAGTAGACACGCTACTTTCGCAACTTGGATTAGAGCCTATTGGTAAGACTAAGTTATCTGAATTTCAT
GATTTATTCCGAAAAATTACAGACACGCCAAAAATACTTTCAAAACACCCAAAAGTATGTCCGTTATGCCTTAAAGAAAA
TGGTTATGCGAAAGAATCATGGAACCTACTTCCAGTAACAGCATGTACTAAACACAAAATAATGCTGATTGACTCCAATA
ATAACGGTCGAATGCTTAGCTGGTATCGCCCTTATTTGGGCTTCTTTGACCATAAACAGCCAATTAAGAAAATCATAAAA
GCCCCAACAGCTTTAATTGAACTCAGCAAACTCTTTGAACGGTTTTTAGATAATCCATCTGCAAGATGTAAAGCCAATCC
TGTTCTTTTCAAAGGACTAACTGCGAATGAGTGCCTGAGCATATTAAATTTTATAGCTCACTTTCAGGCTAAAGCAGAGG
GAGAATCACTGCTGATGACTCAGAATAATCTTTCCATTGCTTCTCAATATCAAAAGGCCTATTCACTTATTAAAAAATGG
CCTGACCAATTCCACGTACTACTATCAACTTTCGCTAGCAATCCCATGACAGCTTTGGAGTCTCAAGGCATTCGAAAACA
TTTCAGAACTCTACATGACCAGTTGCATCTCCAACGAGAAAACAAAGGTATTGTACGAATGAAAGAAGAATTTGAACGAT
ATTTATTATCAAATTGGCCTACAGCATTAAACGAAAGTAGATTAAAAAGAATCTCGATTAAAGCAGTTGAAAAACAACAA
CTAAGCATCACGGAAGCCTGCAAACTATTGAACCGTCGAATACCTAAAGTATCTCATCTAGTTCAAATAGGAATTCTTAC
AGAACATGAGTTTAGGGGTAAAAAATATTACGAGCGTACTGAGTTAGAGCAATACCTAAAAACAGTAGCCGAAAACTGGA
ATTTTCAACAAACCTGTCTGGAATTAAACGTATCGAAATCAACGATATTAAGGCTAATTGACGCTAAATTCATACATGCC
ATCATAAAACCATCCAAACATAACAGAGACTGGCTAATAGATAAGAAAGAAACTATAGCGTTAATCTCCAAACTCAAACG
TAACGCATGTTCTGAAGACAATCTAACAAAATGCTATAGCCTTCAAGGATTCCTTAAACTTGGAAACACATATGAAGATA
CACTCTCAATGATGCTTGAAAGGCAATTGACCTACAAATTCAATAAAGATACCGCCAAACCAAACGGGTTGCATCAGTTT
GTGCAATTTCAACTTCAAATCATTTAG

Upstream 100 bases:

>100_bases
ATTTAGTCATCGCTCTAAAGGCAATTCAATTATTGCCCCCGAAATCGCAAGGTTTCGGATTACAAAAGACCTGAAAATTT
ATTCGATAGTCTAAAATGCT

Downstream 100 bases:

>100_bases
TTTACTAGGATGAAAAAGTTCGGAATCAATCTGACAGTATTTCTAATTTACTTACTAGCCGCTTCGGCTGCTTTTTCAAT
CCAAACGCCCATATTCTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 488; Mature: 488

Protein sequence:

>488_residues
MKLLFSDSRKPDECVASYLIRTAENNGFRRVSHLLNHTDLHWKNSRLPIPTILSGKVEVDTLLSQLGLEPIGKTKLSEFH
DLFRKITDTPKILSKHPKVCPLCLKENGYAKESWNLLPVTACTKHKIMLIDSNNNGRMLSWYRPYLGFFDHKQPIKKIIK
APTALIELSKLFERFLDNPSARCKANPVLFKGLTANECLSILNFIAHFQAKAEGESLLMTQNNLSIASQYQKAYSLIKKW
PDQFHVLLSTFASNPMTALESQGIRKHFRTLHDQLHLQRENKGIVRMKEEFERYLLSNWPTALNESRLKRISIKAVEKQQ
LSITEACKLLNRRIPKVSHLVQIGILTEHEFRGKKYYERTELEQYLKTVAENWNFQQTCLELNVSKSTILRLIDAKFIHA
IIKPSKHNRDWLIDKKETIALISKLKRNACSEDNLTKCYSLQGFLKLGNTYEDTLSMMLERQLTYKFNKDTAKPNGLHQF
VQFQLQII

Sequences:

>Translated_488_residues
MKLLFSDSRKPDECVASYLIRTAENNGFRRVSHLLNHTDLHWKNSRLPIPTILSGKVEVDTLLSQLGLEPIGKTKLSEFH
DLFRKITDTPKILSKHPKVCPLCLKENGYAKESWNLLPVTACTKHKIMLIDSNNNGRMLSWYRPYLGFFDHKQPIKKIIK
APTALIELSKLFERFLDNPSARCKANPVLFKGLTANECLSILNFIAHFQAKAEGESLLMTQNNLSIASQYQKAYSLIKKW
PDQFHVLLSTFASNPMTALESQGIRKHFRTLHDQLHLQRENKGIVRMKEEFERYLLSNWPTALNESRLKRISIKAVEKQQ
LSITEACKLLNRRIPKVSHLVQIGILTEHEFRGKKYYERTELEQYLKTVAENWNFQQTCLELNVSKSTILRLIDAKFIHA
IIKPSKHNRDWLIDKKETIALISKLKRNACSEDNLTKCYSLQGFLKLGNTYEDTLSMMLERQLTYKFNKDTAKPNGLHQF
VQFQLQII
>Mature_488_residues
MKLLFSDSRKPDECVASYLIRTAENNGFRRVSHLLNHTDLHWKNSRLPIPTILSGKVEVDTLLSQLGLEPIGKTKLSEFH
DLFRKITDTPKILSKHPKVCPLCLKENGYAKESWNLLPVTACTKHKIMLIDSNNNGRMLSWYRPYLGFFDHKQPIKKIIK
APTALIELSKLFERFLDNPSARCKANPVLFKGLTANECLSILNFIAHFQAKAEGESLLMTQNNLSIASQYQKAYSLIKKW
PDQFHVLLSTFASNPMTALESQGIRKHFRTLHDQLHLQRENKGIVRMKEEFERYLLSNWPTALNESRLKRISIKAVEKQQ
LSITEACKLLNRRIPKVSHLVQIGILTEHEFRGKKYYERTELEQYLKTVAENWNFQQTCLELNVSKSTILRLIDAKFIHA
IIKPSKHNRDWLIDKKETIALISKLKRNACSEDNLTKCYSLQGFLKLGNTYEDTLSMMLERQLTYKFNKDTAKPNGLHQF
VQFQLQII

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56609; Mature: 56609

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLFSDSRKPDECVASYLIRTAENNGFRRVSHLLNHTDLHWKNSRLPIPTILSGKVEVD
CCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHH
TLLSQLGLEPIGKTKLSEFHDLFRKITDTPKILSKHPKVCPLCLKENGYAKESWNLLPVT
HHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCEEEECCCCCCCCCCCEEEEE
ACTKHKIMLIDSNNNGRMLSWYRPYLGFFDHKQPIKKIIKAPTALIELSKLFERFLDNPS
ECCCEEEEEEECCCCCCEEEECCHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHCCCC
ARCKANPVLFKGLTANECLSILNFIAHFQAKAEGESLLMTQNNLSIASQYQKAYSLIKKW
CCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHC
PDQFHVLLSTFASNPMTALESQGIRKHFRTLHDQLHLQRENKGIVRMKEEFERYLLSNWP
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
TALNESRLKRISIKAVEKQQLSITEACKLLNRRIPKVSHLVQIGILTEHEFRGKKYYERT
CHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEEECHHHCCCHHHHHH
ELEQYLKTVAENWNFQQTCLELNVSKSTILRLIDAKFIHAIIKPSKHNRDWLIDKKETIA
HHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
LISKLKRNACSEDNLTKCYSLQGFLKLGNTYEDTLSMMLERQLTYKFNKDTAKPNGLHQF
HHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEECCCCCCCCHHHHH
VQFQLQII
HHHHHCCC
>Mature Secondary Structure
MKLLFSDSRKPDECVASYLIRTAENNGFRRVSHLLNHTDLHWKNSRLPIPTILSGKVEVD
CCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHH
TLLSQLGLEPIGKTKLSEFHDLFRKITDTPKILSKHPKVCPLCLKENGYAKESWNLLPVT
HHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCEEEECCCCCCCCCCCEEEEE
ACTKHKIMLIDSNNNGRMLSWYRPYLGFFDHKQPIKKIIKAPTALIELSKLFERFLDNPS
ECCCEEEEEEECCCCCCEEEECCHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHCCCC
ARCKANPVLFKGLTANECLSILNFIAHFQAKAEGESLLMTQNNLSIASQYQKAYSLIKKW
CCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHC
PDQFHVLLSTFASNPMTALESQGIRKHFRTLHDQLHLQRENKGIVRMKEEFERYLLSNWP
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
TALNESRLKRISIKAVEKQQLSITEACKLLNRRIPKVSHLVQIGILTEHEFRGKKYYERT
CHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEEECHHHCCCHHHHHH
ELEQYLKTVAENWNFQQTCLELNVSKSTILRLIDAKFIHAIIKPSKHNRDWLIDKKETIA
HHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
LISKLKRNACSEDNLTKCYSLQGFLKLGNTYEDTLSMMLERQLTYKFNKDTAKPNGLHQF
HHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEECCCCCCCCHHHHH
VQFQLQII
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA