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The map label for this gene is 78484721

Identifier: 78484721

GI number: 78484721

Start: 424946

End: 425938

Strand: Reverse

Name: 78484721

Synonym: Tcr_0376

Alternate gene names: NA

Gene position: 425938-424946 (Counterclockwise)

Preceding gene: 78484722

Following gene: 78484720

Centisome position: 17.54

GC content: 36.86

Gene sequence:

>993_bases
ATGAATCAATTCGCAGAAAAAGAACCATACATACTTAGCCCAGACCTTAAATATCTGAGAGAAAAGTTTGATGAATTAAG
AAGGCATAAAAAAGATTTCAATACGGCTAATTGCATGATGATTACAGGAGAGTCTGGCAGTGGTAAAAGTGAATTAGCCA
AAAGATATCTTCAAATATATCCATCCTATCAGGACCAAACAGGGACAAAACAGCCAATCCTTCATTTAGAAATAAAAATG
GCGAATACCGTTAAGGATGTATTGGTTAGTCTCCTAGTTGGAATTAATGACCCTCAAATGGGGAATGGAGCCAGGAACTC
ATCTGAACTTTTTACTCGTTTCGTCCGTTTATCAAAAGTCATAGAGTTAGAATTAATTATTCTTGATGAGGTTCAAGTTA
TTATTGAACGTCGTTCAGAAAAGGTTATCAGCGGTATTGGAGATCTGTTTAAAGATCTAATCAAAGAAACAGGTATACCC
ATAGTATTCATGGGAATGCCATGGGCACGTTACCTGATTGATTCAAATCCTCAACTAAATGGAAGAATCGCAATTAGGCA
CACGATGCCAATATTCAAAGTTAGCGAGCAGAAAAAATTTGAAGATTTTGCAAGCCTTGTAAAAGGGTTAACCAAATCAT
ATGGACTTAGTAATGCTATCGACACCTCAAATAAAGAACTGCTTCTACGGCTATTTGCATTCTCTAAAGGCAATGTAAGA
CAAATTTCTCGCTTACTCCGCAGCCTATTTATTTTTTGCACCATCAATTCAAAGCAACCTAATAGCAGATTGCTCGCTGA
TATCGTTGAATCCTTAGGCTACCCCGAAGCCATAAATCCTTTCAAACAAAACATCACGGATGTGGTTATAGAAGAAAACC
TGACCGAATCAGACTTTTTATTTAGTCATCGCTCTAAAGGCAATTCAATTATTGCCCCCGAAATCGCAAGGTTTCGGATT
ACAAAAGACCTGAAAATTTATTCGATAGTCTAA

Upstream 100 bases:

>100_bases
CTTTTGACCTAATACCTTCTAACTCCTCTAAGTCAAATGAAGTACCCGTTGAGCAAACAACTGTAATAAAGGTTAAAACT
GAAGATTGGGATATTGAATA

Downstream 100 bases:

>100_bases
AATGCTATGAAGCTTTTATTTTCAGATTCGAGAAAACCAGATGAATGCGTTGCAAGCTATCTCATTAGAACGGCTGAAAA
TAACGGCTTCAGAAGAGTCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MNQFAEKEPYILSPDLKYLREKFDELRRHKKDFNTANCMMITGESGSGKSELAKRYLQIYPSYQDQTGTKQPILHLEIKM
ANTVKDVLVSLLVGINDPQMGNGARNSSELFTRFVRLSKVIELELIILDEVQVIIERRSEKVISGIGDLFKDLIKETGIP
IVFMGMPWARYLIDSNPQLNGRIAIRHTMPIFKVSEQKKFEDFASLVKGLTKSYGLSNAIDTSNKELLLRLFAFSKGNVR
QISRLLRSLFIFCTINSKQPNSRLLADIVESLGYPEAINPFKQNITDVVIEENLTESDFLFSHRSKGNSIIAPEIARFRI
TKDLKIYSIV

Sequences:

>Translated_330_residues
MNQFAEKEPYILSPDLKYLREKFDELRRHKKDFNTANCMMITGESGSGKSELAKRYLQIYPSYQDQTGTKQPILHLEIKM
ANTVKDVLVSLLVGINDPQMGNGARNSSELFTRFVRLSKVIELELIILDEVQVIIERRSEKVISGIGDLFKDLIKETGIP
IVFMGMPWARYLIDSNPQLNGRIAIRHTMPIFKVSEQKKFEDFASLVKGLTKSYGLSNAIDTSNKELLLRLFAFSKGNVR
QISRLLRSLFIFCTINSKQPNSRLLADIVESLGYPEAINPFKQNITDVVIEENLTESDFLFSHRSKGNSIIAPEIARFRI
TKDLKIYSIV
>Mature_330_residues
MNQFAEKEPYILSPDLKYLREKFDELRRHKKDFNTANCMMITGESGSGKSELAKRYLQIYPSYQDQTGTKQPILHLEIKM
ANTVKDVLVSLLVGINDPQMGNGARNSSELFTRFVRLSKVIELELIILDEVQVIIERRSEKVISGIGDLFKDLIKETGIP
IVFMGMPWARYLIDSNPQLNGRIAIRHTMPIFKVSEQKKFEDFASLVKGLTKSYGLSNAIDTSNKELLLRLFAFSKGNVR
QISRLLRSLFIFCTINSKQPNSRLLADIVESLGYPEAINPFKQNITDVVIEENLTESDFLFSHRSKGNSIIAPEIARFRI
TKDLKIYSIV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37673; Mature: 37673

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: PS00675 SIGMA54_INTERACT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQFAEKEPYILSPDLKYLREKFDELRRHKKDFNTANCMMITGESGSGKSELAKRYLQIY
CCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHC
PSYQDQTGTKQPILHLEIKMANTVKDVLVSLLVGINDPQMGNGARNSSELFTRFVRLSKV
CCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
IELELIILDEVQVIIERRSEKVISGIGDLFKDLIKETGIPIVFMGMPWARYLIDSNPQLN
HHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHCCCCCCCC
GRIAIRHTMPIFKVSEQKKFEDFASLVKGLTKSYGLSNAIDTSNKELLLRLFAFSKGNVR
CEEEEEECCCCEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCHH
QISRLLRSLFIFCTINSKQPNSRLLADIVESLGYPEAINPFKQNITDVVIEENLTESDFL
HHHHHHHHHEEEEEECCCCCCHHHHHHHHHHCCCCCCCCHHHHCHHHHHHHCCCCCHHHH
FSHRSKGNSIIAPEIARFRITKDLKIYSIV
HHHCCCCCEEECCCHHHEEEECCCEEEEEC
>Mature Secondary Structure
MNQFAEKEPYILSPDLKYLREKFDELRRHKKDFNTANCMMITGESGSGKSELAKRYLQIY
CCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHC
PSYQDQTGTKQPILHLEIKMANTVKDVLVSLLVGINDPQMGNGARNSSELFTRFVRLSKV
CCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
IELELIILDEVQVIIERRSEKVISGIGDLFKDLIKETGIPIVFMGMPWARYLIDSNPQLN
HHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHCCCCCCCC
GRIAIRHTMPIFKVSEQKKFEDFASLVKGLTKSYGLSNAIDTSNKELLLRLFAFSKGNVR
CEEEEEECCCCEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCHH
QISRLLRSLFIFCTINSKQPNSRLLADIVESLGYPEAINPFKQNITDVVIEENLTESDFL
HHHHHHHHHEEEEEECCCCCCHHHHHHHHHHCCCCCCCCHHHHCHHHHHHHCCCCCHHHH
FSHRSKGNSIIAPEIARFRITKDLKIYSIV
HHHCCCCCEEECCCHHHEEEECCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA