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The map label for this gene is 78484563

Identifier: 78484563

GI number: 78484563

Start: 257433

End: 258515

Strand: Reverse

Name: 78484563

Synonym: Tcr_0218

Alternate gene names: NA

Gene position: 258515-257433 (Counterclockwise)

Preceding gene: 78484568

Following gene: 78484562

Centisome position: 10.65

GC content: 45.61

Gene sequence:

>1083_bases
ATGAGCAACGCCCAACTTATCTTTATTGATAAACGCAACCAACCGATTAAAGAATACATCGTCGCGGTTGCCGCTTCCGA
TGGATTGAATATTAAAGGCATTCAAATCATTGCCTCTCCTGCGAAGGGCGAAAAAGCGCTCATTAGCGCCAACGTTAAAA
TTCCACCGCTGGAAGACTTGCAGTTCGATACATCTAAAATAGTGAACGCGATTCTGGATGAGCTCATCGTGGGCGAAGAA
ACGTTAAGCGTGAAAGAATTGATTGAACGTGCGAGTGACGATGAGGACGTCCGTAAATCTTTAAGCAAGTCCGTCAAAAA
ACTCAAAACCAAGCTCACGGATCTCATCAAAGAATTTACTGGATCAGAGGTTATCAACTTGATTCAGGAACGCCGCAATG
ATGCCAATTTCAAACTGAAAGAACACGATCAAGAGCTGAAAGGCAATAAAGTCGTCTGTATCGATATTGAAGCCACCGAC
ATCTGCACCAAAGACTCGGCCGATATCATCCAAGTTTCTATTTGTGACCTGGAAGGCAACGAATTATTGAACCAGCTAAT
CAATCCGGGTTACGACATTCCTGAGAATGATAAGCACAACATTTGTACTGAAATGGTTCAAGATGCGCCTTTCCTGGCGG
ATGCCTGGGACGAAATTCACCGGATTCTGGCGGAAGCAGACACCGTACTGGCCTACAGCACCGAGTCTGACTTTGCTTAT
CTGGAAAAAAGTGCCGAAAAGAAAATGCTGACGTTTGAACTGGATTACAGCAAGTGGCTGGATGTCGCAGAGCTTTCCAA
AGACTTAGTCGGTGCATTACGCTGGCAATCGGAAAAAATGTATTGGTTCTATAAAACGCCGAAGCTGACCGATGCGTATG
CCAAAATCATGGGCAAACCTTTCCCTGGCGATGCGCACGATGCCTTAGCCGATGCCCAAGCGACAGCCGAATTATTTAAT
GCCATGCTGATGCGAGGCCGCAAATCACAAGTGAAGATTAAAAAACCTGAGCCGGTGAAAGATGAAATTTCGAACAACCC
ATTTGCGCAGGCTTTTGCCGCCGCCAAACGTAAGTCGAAATAA

Upstream 100 bases:

>100_bases
AAAAAGATGAAATTTACAGGAAAAGCGATCAGTTTCCCGGAATAGAAAACCACAAGCTGATAAAATAACGGTCATTTTCA
CAGAAACGTTAAGAACATAT

Downstream 100 bases:

>100_bases
CACGAGTCCTTATGTCACAACAACTCACATTCAAACAACTGGAAAAAGCGCAACAAGGCGATTCGTTTGACTGGGAAGCC
GTTAAGAAACAAGTCAAATA

Product: exonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 360; Mature: 359

Protein sequence:

>360_residues
MSNAQLIFIDKRNQPIKEYIVAVAASDGLNIKGIQIIASPAKGEKALISANVKIPPLEDLQFDTSKIVNAILDELIVGEE
TLSVKELIERASDDEDVRKSLSKSVKKLKTKLTDLIKEFTGSEVINLIQERRNDANFKLKEHDQELKGNKVVCIDIEATD
ICTKDSADIIQVSICDLEGNELLNQLINPGYDIPENDKHNICTEMVQDAPFLADAWDEIHRILAEADTVLAYSTESDFAY
LEKSAEKKMLTFELDYSKWLDVAELSKDLVGALRWQSEKMYWFYKTPKLTDAYAKIMGKPFPGDAHDALADAQATAELFN
AMLMRGRKSQVKIKKPEPVKDEISNNPFAQAFAAAKRKSK

Sequences:

>Translated_360_residues
MSNAQLIFIDKRNQPIKEYIVAVAASDGLNIKGIQIIASPAKGEKALISANVKIPPLEDLQFDTSKIVNAILDELIVGEE
TLSVKELIERASDDEDVRKSLSKSVKKLKTKLTDLIKEFTGSEVINLIQERRNDANFKLKEHDQELKGNKVVCIDIEATD
ICTKDSADIIQVSICDLEGNELLNQLINPGYDIPENDKHNICTEMVQDAPFLADAWDEIHRILAEADTVLAYSTESDFAY
LEKSAEKKMLTFELDYSKWLDVAELSKDLVGALRWQSEKMYWFYKTPKLTDAYAKIMGKPFPGDAHDALADAQATAELFN
AMLMRGRKSQVKIKKPEPVKDEISNNPFAQAFAAAKRKSK
>Mature_359_residues
SNAQLIFIDKRNQPIKEYIVAVAASDGLNIKGIQIIASPAKGEKALISANVKIPPLEDLQFDTSKIVNAILDELIVGEET
LSVKELIERASDDEDVRKSLSKSVKKLKTKLTDLIKEFTGSEVINLIQERRNDANFKLKEHDQELKGNKVVCIDIEATDI
CTKDSADIIQVSICDLEGNELLNQLINPGYDIPENDKHNICTEMVQDAPFLADAWDEIHRILAEADTVLAYSTESDFAYL
EKSAEKKMLTFELDYSKWLDVAELSKDLVGALRWQSEKMYWFYKTPKLTDAYAKIMGKPFPGDAHDALADAQATAELFNA
MLMRGRKSQVKIKKPEPVKDEISNNPFAQAFAAAKRKSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40369; Mature: 40238

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNAQLIFIDKRNQPIKEYIVAVAASDGLNIKGIQIIASPAKGEKALISANVKIPPLEDL
CCCCEEEEEECCCCCHHHHHHHHCCCCCCCEEEEEEEECCCCCCEEEEECCCCCCCCCCC
QFDTSKIVNAILDELIVGEETLSVKELIERASDDEDVRKSLSKSVKKLKTKLTDLIKEFT
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
GSEVINLIQERRNDANFKLKEHDQELKGNKVVCIDIEATDICTKDSADIIQVSICDLEGN
CHHHHHHHHHHCCCCCCEEHHHHHHHCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCHH
ELLNQLINPGYDIPENDKHNICTEMVQDAPFLADAWDEIHRILAEADTVLAYSTESDFAY
HHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEEEECCCHHHH
LEKSAEKKMLTFELDYSKWLDVAELSKDLVGALRWQSEKMYWFYKTPKLTDAYAKIMGKP
HHHHHCCCEEEEEECHHHHCCHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHCCC
FPGDAHDALADAQATAELFNAMLMRGRKSQVKIKKPEPVKDEISNNPFAQAFAAAKRKSK
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
SNAQLIFIDKRNQPIKEYIVAVAASDGLNIKGIQIIASPAKGEKALISANVKIPPLEDL
CCCEEEEEECCCCCHHHHHHHHCCCCCCCEEEEEEEECCCCCCEEEEECCCCCCCCCCC
QFDTSKIVNAILDELIVGEETLSVKELIERASDDEDVRKSLSKSVKKLKTKLTDLIKEFT
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
GSEVINLIQERRNDANFKLKEHDQELKGNKVVCIDIEATDICTKDSADIIQVSICDLEGN
CHHHHHHHHHHCCCCCCEEHHHHHHHCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCHH
ELLNQLINPGYDIPENDKHNICTEMVQDAPFLADAWDEIHRILAEADTVLAYSTESDFAY
HHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEEEECCCHHHH
LEKSAEKKMLTFELDYSKWLDVAELSKDLVGALRWQSEKMYWFYKTPKLTDAYAKIMGKP
HHHHHCCCEEEEEECHHHHCCHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHCCC
FPGDAHDALADAQATAELFNAMLMRGRKSQVKIKKPEPVKDEISNNPFAQAFAAAKRKSK
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA