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The map label for this gene is 78484568

Identifier: 78484568

GI number: 78484568

Start: 264082

End: 265215

Strand: Reverse

Name: 78484568

Synonym: Tcr_0223

Alternate gene names: NA

Gene position: 265215-264082 (Counterclockwise)

Preceding gene: 78484569

Following gene: 78484563

Centisome position: 10.92

GC content: 45.15

Gene sequence:

>1134_bases
ATGTTTTTAGAACAGATTGAACCGATGAGTTCACAACCAACTGGCTTAAAAACCAAAGGCGAAGCACAGGCTTTCTACAA
CAGTTTAAGAACGGTTGGCTTGCGCCATGCTATTCGCAATATCGACACGGAACTCAAGCTGGAAGAAATTGACGGGCGCC
TTGTCCCCATCACCATCAACACTGCGCAATATGACAACAGTTATGTATGCTCACCTTATACCGCTTACATTTCTTACGCT
AAAGAAGAACTGGGATTGCTCAACAACCTTTGGCTGGAAACCAGTTTAAAAAGCGTAATCGGAATGGCCAGTGGCGCGTT
GAAACTGGCGAAAATCAATCAAACCGTTTCAATCAATAATTGGCTGGTCTCCACCAATCTCGTACCGGACTGGTCTTCGG
AGACGGTTTCGGAGTTCACGCAATCCCTAAGTCAGCGTTACCCCGATCACAGTTTGAGTATCCGCTCATTAAATCGCCAA
ACCAATGCCAAATTGATGCAAACATTGCAACAGCATGGCTGGCTTTTGATTCCTGCTAGGCAGGTGTATTTATTTGATAA
CAAGAACACCGACTGGTGGAAGCGCAATAACACCAAAAACGATCAGCGCCTGTTACGAAAAACCACGTTGCAGTATGTCT
CAAACGACGACTTGTTTCCTGAAGACTTTCAAGCGATTGAAGCCTGTTTTAATCAATTATTTATTGAAAAACACTCCCGT
TACAACCCTCAATTCACGGCCGACTATTTTCAAGCACTGCATCAGGTAGGCCTGGTTACATTTCATTGTTTTAGAAGCAT
TTCCGGGCGAATTGTCGCAGCGATTGGGTTACTGACGCAACACGACACCATTACCTCGCCGATATTGGGGTACGACACAC
GATTGCCAAAGTCTCTTGGCTTATATCGTTTGTTGATTGCTGTTCTGCTGAAAGAAACCTATGAAAGTGGCCGCCGCATG
AATTTAAGCTCAGGAGCCGGCGCTTTCAAGCGAATGCGTGGCGGCGAACCGGAAGTGGAATACACCGCTTTTTATGTAAA
ACATTTGCCACAGAAACGGCGTTGGGCACTGTGTCAGTTTGCCAAATTACTGAATCAGACAGCCCCACAGTTATTCAAAA
AATACCAAATTTAG

Upstream 100 bases:

>100_bases
ACTGGTCAACGGACATTGAAGCCAATCGTGACTGGACCCAGCAAGATCGCTCAGCGATTTATGGTGGCGTGCATACCTAC
ACTCTCTCTTCGGTTGCATA

Downstream 100 bases:

>100_bases
CCTATTAGCTTTTGACCGGACCGACCCAGACTTGCTGCACGTTTACAAATTCCATAATGCCATGCGGTCCAAGTTCACGT
CCGTAACCGGACTTTTTGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MFLEQIEPMSSQPTGLKTKGEAQAFYNSLRTVGLRHAIRNIDTELKLEEIDGRLVPITINTAQYDNSYVCSPYTAYISYA
KEELGLLNNLWLETSLKSVIGMASGALKLAKINQTVSINNWLVSTNLVPDWSSETVSEFTQSLSQRYPDHSLSIRSLNRQ
TNAKLMQTLQQHGWLLIPARQVYLFDNKNTDWWKRNNTKNDQRLLRKTTLQYVSNDDLFPEDFQAIEACFNQLFIEKHSR
YNPQFTADYFQALHQVGLVTFHCFRSISGRIVAAIGLLTQHDTITSPILGYDTRLPKSLGLYRLLIAVLLKETYESGRRM
NLSSGAGAFKRMRGGEPEVEYTAFYVKHLPQKRRWALCQFAKLLNQTAPQLFKKYQI

Sequences:

>Translated_377_residues
MFLEQIEPMSSQPTGLKTKGEAQAFYNSLRTVGLRHAIRNIDTELKLEEIDGRLVPITINTAQYDNSYVCSPYTAYISYA
KEELGLLNNLWLETSLKSVIGMASGALKLAKINQTVSINNWLVSTNLVPDWSSETVSEFTQSLSQRYPDHSLSIRSLNRQ
TNAKLMQTLQQHGWLLIPARQVYLFDNKNTDWWKRNNTKNDQRLLRKTTLQYVSNDDLFPEDFQAIEACFNQLFIEKHSR
YNPQFTADYFQALHQVGLVTFHCFRSISGRIVAAIGLLTQHDTITSPILGYDTRLPKSLGLYRLLIAVLLKETYESGRRM
NLSSGAGAFKRMRGGEPEVEYTAFYVKHLPQKRRWALCQFAKLLNQTAPQLFKKYQI
>Mature_377_residues
MFLEQIEPMSSQPTGLKTKGEAQAFYNSLRTVGLRHAIRNIDTELKLEEIDGRLVPITINTAQYDNSYVCSPYTAYISYA
KEELGLLNNLWLETSLKSVIGMASGALKLAKINQTVSINNWLVSTNLVPDWSSETVSEFTQSLSQRYPDHSLSIRSLNRQ
TNAKLMQTLQQHGWLLIPARQVYLFDNKNTDWWKRNNTKNDQRLLRKTTLQYVSNDDLFPEDFQAIEACFNQLFIEKHSR
YNPQFTADYFQALHQVGLVTFHCFRSISGRIVAAIGLLTQHDTITSPILGYDTRLPKSLGLYRLLIAVLLKETYESGRRM
NLSSGAGAFKRMRGGEPEVEYTAFYVKHLPQKRRWALCQFAKLLNQTAPQLFKKYQI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43308; Mature: 43308

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLEQIEPMSSQPTGLKTKGEAQAFYNSLRTVGLRHAIRNIDTELKLEEIDGRLVPITIN
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEEEE
TAQYDNSYVCSPYTAYISYAKEELGLLNNLWLETSLKSVIGMASGALKLAKINQTVSINN
EECCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEECC
WLVSTNLVPDWSSETVSEFTQSLSQRYPDHSLSIRSLNRQTNAKLMQTLQQHGWLLIPAR
EEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHCHHHHHHHHHHHHHCCEEEEECE
QVYLFDNKNTDWWKRNNTKNDQRLLRKTTLQYVSNDDLFPEDFQAIEACFNQLFIEKHSR
EEEEEECCCCCHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC
YNPQFTADYFQALHQVGLVTFHCFRSISGRIVAAIGLLTQHDTITSPILGYDTRLPKSLG
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHH
LYRLLIAVLLKETYESGRRMNLSSGAGAFKRMRGGEPEVEYTAFYVKHLPQKRRWALCQF
HHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHH
AKLLNQTAPQLFKKYQI
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFLEQIEPMSSQPTGLKTKGEAQAFYNSLRTVGLRHAIRNIDTELKLEEIDGRLVPITIN
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEEEE
TAQYDNSYVCSPYTAYISYAKEELGLLNNLWLETSLKSVIGMASGALKLAKINQTVSINN
EECCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEECC
WLVSTNLVPDWSSETVSEFTQSLSQRYPDHSLSIRSLNRQTNAKLMQTLQQHGWLLIPAR
EEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHCHHHHHHHHHHHHHCCEEEEECE
QVYLFDNKNTDWWKRNNTKNDQRLLRKTTLQYVSNDDLFPEDFQAIEACFNQLFIEKHSR
EEEEEECCCCCHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC
YNPQFTADYFQALHQVGLVTFHCFRSISGRIVAAIGLLTQHDTITSPILGYDTRLPKSLG
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHH
LYRLLIAVLLKETYESGRRMNLSSGAGAFKRMRGGEPEVEYTAFYVKHLPQKRRWALCQF
HHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHH
AKLLNQTAPQLFKKYQI
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA