| Definition | Thiomicrospira crunogena XCL-2, complete genome. |
|---|---|
| Accession | NC_007520 |
| Length | 2,427,734 |
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The map label for this gene is hisI
Identifier: 78484562
GI number: 78484562
Start: 256978
End: 257421
Strand: Reverse
Name: hisI
Synonym: Tcr_0217
Alternate gene names: 78484562
Gene position: 257421-256978 (Counterclockwise)
Preceding gene: 78484563
Following gene: 78484557
Centisome position: 10.6
GC content: 44.37
Gene sequence:
>444_bases ATGTCACAACAACTCACATTCAAACAACTGGAAAAAGCGCAACAAGGCGATTCGTTTGACTGGGAAGCCGTTAAGAAACA AGTCAAATATGATGATAATGGTCTGATTCCAGCCATTGCGCAGCAATTCGACAGCAAAGAAGTCTTAATGATGGCTTGGA TGAATGAAGCTGCGTTGCAAGAAACCTTGGAAACCGGACGTGTCTGTTACTGGTCACGTTCACGTCAGTCTTACTGGCGT AAAGGGGAAGAATCCGGGCAAATTCAGCTTTTAAAAGACTTACGTTTTGACTGTGACGGCGATGCGATTCTACTGTTGGT GGATCAAACAGGTCCAGCCTGCCATACCGGACGTAAAAGCTGTTTTTACACCGCCATTCATGACCATCAGGCCAAAATCT TAACCAACCCGATTATTGACCCTGAAGCGTTGTACAAAAAATAA
Upstream 100 bases:
>100_bases AGATTAAAAAACCTGAGCCGGTGAAAGATGAAATTTCGAACAACCCATTTGCGCAGGCTTTTGCCGCCGCCAAACGTAAG TCGAAATAACACGAGTCCTT
Downstream 100 bases:
>100_bases CCATTTTCTGAATCAAAAAAATGGCCAGGCCTGGTCATTTTTCATTAATGTTCAAACGCTTAATCTTCCAGCTTGACCTC AAATAATTCGCGCATCACCA
Product: phosphoribosyl-AMP cyclohydrolase
Products: NA
Alternate protein names: PRA-CH
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MSQQLTFKQLEKAQQGDSFDWEAVKKQVKYDDNGLIPAIAQQFDSKEVLMMAWMNEAALQETLETGRVCYWSRSRQSYWR KGEESGQIQLLKDLRFDCDGDAILLLVDQTGPACHTGRKSCFYTAIHDHQAKILTNPIIDPEALYKK
Sequences:
>Translated_147_residues MSQQLTFKQLEKAQQGDSFDWEAVKKQVKYDDNGLIPAIAQQFDSKEVLMMAWMNEAALQETLETGRVCYWSRSRQSYWR KGEESGQIQLLKDLRFDCDGDAILLLVDQTGPACHTGRKSCFYTAIHDHQAKILTNPIIDPEALYKK >Mature_146_residues SQQLTFKQLEKAQQGDSFDWEAVKKQVKYDDNGLIPAIAQQFDSKEVLMMAWMNEAALQETLETGRVCYWSRSRQSYWRK GEESGQIQLLKDLRFDCDGDAILLLVDQTGPACHTGRKSCFYTAIHDHQAKILTNPIIDPEALYKK
Specific function: Histidine biosynthesis; second step. Histidine biosynthesis; third step. [C]
COG id: COG0139
COG function: function code E; Phosphoribosyl-AMP cyclohydrolase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PRA-CH family
Homologues:
Organism=Escherichia coli, GI2367128, Length=114, Percent_Identity=42.1052631578947, Blast_Score=101, Evalue=3e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS3_THICR (Q31J60)
Other databases:
- EMBL: CP000109 - RefSeq: YP_390487.1 - ProteinModelPortal: Q31J60 - SMR: Q31J60 - STRING: Q31J60 - GeneID: 3761656 - GenomeReviews: CP000109_GR - KEGG: tcx:Tcr_0217 - NMPDR: fig|317025.3.peg.403 - eggNOG: COG0139 - HOGENOM: HBG294308 - OMA: TQYVHEV - PhylomeDB: Q31J60 - BioCyc: TCRU317025:TCR_0217-MONOMER - GO: GO:0005737 - HAMAP: MF_01021 - InterPro: IPR002496 - ProDom: PD002610
Pfam domain/function: PF01502 PRA-CH
EC number: =3.5.4.19
Molecular weight: Translated: 16905; Mature: 16774
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQQLTFKQLEKAQQGDSFDWEAVKKQVKYDDNGLIPAIAQQFDSKEVLMMAWMNEAALQ CCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHCCCCCEEHHHHHHHHHHH ETLETGRVCYWSRSRQSYWRKGEESGQIQLLKDLRFDCDGDAILLLVDQTGPACHTGRKS HHHHCCCEEEEECCHHHHHHCCCCCCCEEEHHHCCCCCCCCEEEEEECCCCCCCCCCCCC CFYTAIHDHQAKILTNPIIDPEALYKK EEEEEECCCCHHHHCCCCCCHHHHHCC >Mature Secondary Structure SQQLTFKQLEKAQQGDSFDWEAVKKQVKYDDNGLIPAIAQQFDSKEVLMMAWMNEAALQ CCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHCCCCCEEHHHHHHHHHHH ETLETGRVCYWSRSRQSYWRKGEESGQIQLLKDLRFDCDGDAILLLVDQTGPACHTGRKS HHHHCCCEEEEECCHHHHHHCCCCCCCEEEHHHCCCCCCCCEEEEEECCCCCCCCCCCCC CFYTAIHDHQAKILTNPIIDPEALYKK EEEEEECCCCHHHHCCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA