Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

Click here to switch to the map view.

The map label for this gene is 78358818

Identifier: 78358818

GI number: 78358818

Start: 3723780

End: 3724460

Strand: Reverse

Name: 78358818

Synonym: Dde_3780

Alternate gene names: NA

Gene position: 3724460-3723780 (Counterclockwise)

Preceding gene: 78358819

Following gene: 78358814

Centisome position: 99.85

GC content: 51.98

Gene sequence:

>681_bases
ATGAACATTCGAATCCCCCTCTTCGGGCTTGTACGCGACGAACGCTCGCCCATGACAGGACTTGTCGAGCATTACGAGCA
GATAGCCAAGGGCATGCGTCTTATCGAAGAGTCCATGGAGTGCTACATAACCGGCGGCACCTGCAAGGATTTCAATACAC
TGCTGCGAGAAGTGGATGACGCGGAAGAACATGCCGACAAAATAAAGCGCAACATCCGCAACCACCTGCCGCGTGCTTTG
TTCATGGCTGTGGATAAGACGCTTTTCATCAACTATACCCGCAGTCAGGACAACATTCTTGATGCAGGGCAGGAAGCGCT
TAACTGGCTGGGCATGCGCCGCATTCCCATTCCTGATGAATTTCAGAAAGAGTTTGTTTTCTTCCTGCACAAGGTGTCCA
AAAGCATCGAACTGCTGAAGCCGGCACTTGATGCCACAGTGGGACTCATCCACGGCGGCGGCAAGCTGGACAGAGAATCC
ACCAAAAACACCTACCGCGCCATCCGTGCCCAGCAGCGCGAAGTGTTCCGTGAAAAGAACCGGATTGTTTCCGCTATCTA
CCGTTCTGATCTTGATTTCAAGGATATCTACCAGCTCATCCATTTTGTGGATGCGCTGTACGCCATGAGCCATAATACCG
AGAACTGCTCGGATATGCTGCGCTCTATGATTGCTCGGTAG

Upstream 100 bases:

>100_bases
TTACAGTACCTATTGCCGCTATAACCAGTATCGTCATTTTCCAGCTTCTCAGATGGTCGTTTTTGTAGGACCCTGAAGGC
TGTTACCGGAGGCTTCATAT

Downstream 100 bases:

>100_bases
TTTTTTTCCGATACCAAATGCCCTCGCAAGAGGGCTTTTTTTTATGGCTCAGGGCGTCTGCGGCATTGAGTGCTGTCTGC
GTGCGGCGTCCGGCGTCCGG

Product: phosphate transport regulator-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MNIRIPLFGLVRDERSPMTGLVEHYEQIAKGMRLIEESMECYITGGTCKDFNTLLREVDDAEEHADKIKRNIRNHLPRAL
FMAVDKTLFINYTRSQDNILDAGQEALNWLGMRRIPIPDEFQKEFVFFLHKVSKSIELLKPALDATVGLIHGGGKLDRES
TKNTYRAIRAQQREVFREKNRIVSAIYRSDLDFKDIYQLIHFVDALYAMSHNTENCSDMLRSMIAR

Sequences:

>Translated_226_residues
MNIRIPLFGLVRDERSPMTGLVEHYEQIAKGMRLIEESMECYITGGTCKDFNTLLREVDDAEEHADKIKRNIRNHLPRAL
FMAVDKTLFINYTRSQDNILDAGQEALNWLGMRRIPIPDEFQKEFVFFLHKVSKSIELLKPALDATVGLIHGGGKLDRES
TKNTYRAIRAQQREVFREKNRIVSAIYRSDLDFKDIYQLIHFVDALYAMSHNTENCSDMLRSMIAR
>Mature_226_residues
MNIRIPLFGLVRDERSPMTGLVEHYEQIAKGMRLIEESMECYITGGTCKDFNTLLREVDDAEEHADKIKRNIRNHLPRAL
FMAVDKTLFINYTRSQDNILDAGQEALNWLGMRRIPIPDEFQKEFVFFLHKVSKSIELLKPALDATVGLIHGGGKLDRES
TKNTYRAIRAQQREVFREKNRIVSAIYRSDLDFKDIYQLIHFVDALYAMSHNTENCSDMLRSMIAR

Specific function: Unknown

COG id: COG1392

COG function: function code P; Phosphate transport regulator (distant homolog of PhoU)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0111 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002727
- InterPro:   IPR018445 [H]

Pfam domain/function: PF01865 PhoU_div [H]

EC number: NA

Molecular weight: Translated: 26271; Mature: 26271

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIRIPLFGLVRDERSPMTGLVEHYEQIAKGMRLIEESMECYITGGTCKDFNTLLREVDD
CCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHCC
AEEHADKIKRNIRNHLPRALFMAVDKTLFINYTRSQDNILDAGQEALNWLGMRRIPIPDE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHH
FQKEFVFFLHKVSKSIELLKPALDATVGLIHGGGKLDRESTKNTYRAIRAQQREVFREKN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RIVSAIYRSDLDFKDIYQLIHFVDALYAMSHNTENCSDMLRSMIAR
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MNIRIPLFGLVRDERSPMTGLVEHYEQIAKGMRLIEESMECYITGGTCKDFNTLLREVDD
CCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHCC
AEEHADKIKRNIRNHLPRALFMAVDKTLFINYTRSQDNILDAGQEALNWLGMRRIPIPDE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHH
FQKEFVFFLHKVSKSIELLKPALDATVGLIHGGGKLDRESTKNTYRAIRAQQREVFREKN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RIVSAIYRSDLDFKDIYQLIHFVDALYAMSHNTENCSDMLRSMIAR
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]