| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78358818
Identifier: 78358818
GI number: 78358818
Start: 3723780
End: 3724460
Strand: Reverse
Name: 78358818
Synonym: Dde_3780
Alternate gene names: NA
Gene position: 3724460-3723780 (Counterclockwise)
Preceding gene: 78358819
Following gene: 78358814
Centisome position: 99.85
GC content: 51.98
Gene sequence:
>681_bases ATGAACATTCGAATCCCCCTCTTCGGGCTTGTACGCGACGAACGCTCGCCCATGACAGGACTTGTCGAGCATTACGAGCA GATAGCCAAGGGCATGCGTCTTATCGAAGAGTCCATGGAGTGCTACATAACCGGCGGCACCTGCAAGGATTTCAATACAC TGCTGCGAGAAGTGGATGACGCGGAAGAACATGCCGACAAAATAAAGCGCAACATCCGCAACCACCTGCCGCGTGCTTTG TTCATGGCTGTGGATAAGACGCTTTTCATCAACTATACCCGCAGTCAGGACAACATTCTTGATGCAGGGCAGGAAGCGCT TAACTGGCTGGGCATGCGCCGCATTCCCATTCCTGATGAATTTCAGAAAGAGTTTGTTTTCTTCCTGCACAAGGTGTCCA AAAGCATCGAACTGCTGAAGCCGGCACTTGATGCCACAGTGGGACTCATCCACGGCGGCGGCAAGCTGGACAGAGAATCC ACCAAAAACACCTACCGCGCCATCCGTGCCCAGCAGCGCGAAGTGTTCCGTGAAAAGAACCGGATTGTTTCCGCTATCTA CCGTTCTGATCTTGATTTCAAGGATATCTACCAGCTCATCCATTTTGTGGATGCGCTGTACGCCATGAGCCATAATACCG AGAACTGCTCGGATATGCTGCGCTCTATGATTGCTCGGTAG
Upstream 100 bases:
>100_bases TTACAGTACCTATTGCCGCTATAACCAGTATCGTCATTTTCCAGCTTCTCAGATGGTCGTTTTTGTAGGACCCTGAAGGC TGTTACCGGAGGCTTCATAT
Downstream 100 bases:
>100_bases TTTTTTTCCGATACCAAATGCCCTCGCAAGAGGGCTTTTTTTTATGGCTCAGGGCGTCTGCGGCATTGAGTGCTGTCTGC GTGCGGCGTCCGGCGTCCGG
Product: phosphate transport regulator-like
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MNIRIPLFGLVRDERSPMTGLVEHYEQIAKGMRLIEESMECYITGGTCKDFNTLLREVDDAEEHADKIKRNIRNHLPRAL FMAVDKTLFINYTRSQDNILDAGQEALNWLGMRRIPIPDEFQKEFVFFLHKVSKSIELLKPALDATVGLIHGGGKLDRES TKNTYRAIRAQQREVFREKNRIVSAIYRSDLDFKDIYQLIHFVDALYAMSHNTENCSDMLRSMIAR
Sequences:
>Translated_226_residues MNIRIPLFGLVRDERSPMTGLVEHYEQIAKGMRLIEESMECYITGGTCKDFNTLLREVDDAEEHADKIKRNIRNHLPRAL FMAVDKTLFINYTRSQDNILDAGQEALNWLGMRRIPIPDEFQKEFVFFLHKVSKSIELLKPALDATVGLIHGGGKLDRES TKNTYRAIRAQQREVFREKNRIVSAIYRSDLDFKDIYQLIHFVDALYAMSHNTENCSDMLRSMIAR >Mature_226_residues MNIRIPLFGLVRDERSPMTGLVEHYEQIAKGMRLIEESMECYITGGTCKDFNTLLREVDDAEEHADKIKRNIRNHLPRAL FMAVDKTLFINYTRSQDNILDAGQEALNWLGMRRIPIPDEFQKEFVFFLHKVSKSIELLKPALDATVGLIHGGGKLDRES TKNTYRAIRAQQREVFREKNRIVSAIYRSDLDFKDIYQLIHFVDALYAMSHNTENCSDMLRSMIAR
Specific function: Unknown
COG id: COG1392
COG function: function code P; Phosphate transport regulator (distant homolog of PhoU)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0111 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002727 - InterPro: IPR018445 [H]
Pfam domain/function: PF01865 PhoU_div [H]
EC number: NA
Molecular weight: Translated: 26271; Mature: 26271
Theoretical pI: Translated: 7.63; Mature: 7.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIRIPLFGLVRDERSPMTGLVEHYEQIAKGMRLIEESMECYITGGTCKDFNTLLREVDD CCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHCC AEEHADKIKRNIRNHLPRALFMAVDKTLFINYTRSQDNILDAGQEALNWLGMRRIPIPDE HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHH FQKEFVFFLHKVSKSIELLKPALDATVGLIHGGGKLDRESTKNTYRAIRAQQREVFREKN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RIVSAIYRSDLDFKDIYQLIHFVDALYAMSHNTENCSDMLRSMIAR HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC >Mature Secondary Structure MNIRIPLFGLVRDERSPMTGLVEHYEQIAKGMRLIEESMECYITGGTCKDFNTLLREVDD CCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHCC AEEHADKIKRNIRNHLPRALFMAVDKTLFINYTRSQDNILDAGQEALNWLGMRRIPIPDE HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHH FQKEFVFFLHKVSKSIELLKPALDATVGLIHGGGKLDRESTKNTYRAIRAQQREVFREKN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RIVSAIYRSDLDFKDIYQLIHFVDALYAMSHNTENCSDMLRSMIAR HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9679194 [H]