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The map label for this gene is pyrK [H]

Identifier: 78358675

GI number: 78358675

Start: 3599576

End: 3600424

Strand: Reverse

Name: pyrK [H]

Synonym: Dde_3636

Alternate gene names: 78358675

Gene position: 3600424-3599576 (Counterclockwise)

Preceding gene: 78358676

Following gene: 78358674

Centisome position: 96.52

GC content: 58.07

Gene sequence:

>849_bases
ATGGAAAATACAATTATTTCCAAGGAGCGGCTGATCCCCGGCCAGACCAGCAAGCTGGTCATCGATGCTCCGCATATTGC
CGCCAAGGCGCAGCCGGGCAACTTTGTCATTCTGCGCGTGTGCGAACATGGTGAACGTATTCCGCTGACCATCGCGGATG
CCGACCCTGAAAAAGGCACCATAACCATCGTGTATCTGGTCATGGGCAAAAGCACGGCCATGCTGGAAGATCTGAACGAG
GGCGATGCCATTCTTGACCTGTGCGGTCCTCTGGGACGTGCGACGCATATAGAGCAGGGCGGCACAGTCATCTGTGTGGG
CGGCGGCACCGGCATTGCCGCCATGCATCACATTGCCAAGGGGCACCATAAAGCCGGCAACCACGTGGTCGCCATCATCG
GCGCCCGCAGCAAAGATCTGCTGCTGTTTGAAAAAGAGCTCAAGGAATTTGCTCCTGAAGTGCTTGTCTCCACCGATGAC
GGCAGCTACGGACATAAAGGGCTGGTTACCGAACTGCTGCGGCAGCGGCTGGAAGCAGACGACAGTGTAAGCGAAGTGGT
GGCCGTGGGCCCTGTGCCCATGATGGAGGCTGTTGCCCGCACCACAGAACCTTTCGGCGTGAAAACCACGGTGAGCCTGA
ACTCCATAATGGTGGACGGCATAGGCATGTGCGGCGCCTGCCGCGTGACGGTGGACAACGAGACCCGTTTTGCCTGTGTG
GACGGACCGGAGTTTGACGGACACAAGGTGGATTTTGCGGAACTGCGGCAGCGGCTGGGCGCATTCCGCCCGCTGGAGCG
TGAATCCTACGACCATCACTGCAGGTGCAAGTGTAATGAAAGCAAGTAA

Upstream 100 bases:

>100_bases
TGCGGCTGCACAGTCAGCGCAGCACGCTTTTTCTGCAGGAACGGATGATAAGCTTCATGTCTGTCCGGCATGACCGGAGC
AGCAAGCAAACGGATAGCAT

Downstream 100 bases:

>100_bases
AAAGCCCGTACTGCCCCGTGTGCCCATGCCCAACCAGCCGCCCGCGGAACGCGTGCGTAATTTTGACGAAGTGGCGCTGG
GGTATACGCCGGAAATGGCG

Product: ferredoxin-NADP(+) reductase subunit alpha

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MENTIISKERLIPGQTSKLVIDAPHIAAKAQPGNFVILRVCEHGERIPLTIADADPEKGTITIVYLVMGKSTAMLEDLNE
GDAILDLCGPLGRATHIEQGGTVICVGGGTGIAAMHHIAKGHHKAGNHVVAIIGARSKDLLLFEKELKEFAPEVLVSTDD
GSYGHKGLVTELLRQRLEADDSVSEVVAVGPVPMMEAVARTTEPFGVKTTVSLNSIMVDGIGMCGACRVTVDNETRFACV
DGPEFDGHKVDFAELRQRLGAFRPLERESYDHHCRCKCNESK

Sequences:

>Translated_282_residues
MENTIISKERLIPGQTSKLVIDAPHIAAKAQPGNFVILRVCEHGERIPLTIADADPEKGTITIVYLVMGKSTAMLEDLNE
GDAILDLCGPLGRATHIEQGGTVICVGGGTGIAAMHHIAKGHHKAGNHVVAIIGARSKDLLLFEKELKEFAPEVLVSTDD
GSYGHKGLVTELLRQRLEADDSVSEVVAVGPVPMMEAVARTTEPFGVKTTVSLNSIMVDGIGMCGACRVTVDNETRFACV
DGPEFDGHKVDFAELRQRLGAFRPLERESYDHHCRCKCNESK
>Mature_282_residues
MENTIISKERLIPGQTSKLVIDAPHIAAKAQPGNFVILRVCEHGERIPLTIADADPEKGTITIVYLVMGKSTAMLEDLNE
GDAILDLCGPLGRATHIEQGGTVICVGGGTGIAAMHHIAKGHHKAGNHVVAIIGARSKDLLLFEKELKEFAPEVLVSTDD
GSYGHKGLVTELLRQRLEADDSVSEVVAVGPVPMMEAVARTTEPFGVKTTVSLNSIMVDGIGMCGACRVTVDNETRFACV
DGPEFDGHKVDFAELRQRLGAFRPLERESYDHHCRCKCNESK

Specific function: Is responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the pyrD subunit to the ultimate electron acceptor NAD(+) [H]

COG id: COG0543

COG function: function code HC; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012165
- InterPro:   IPR019480
- InterPro:   IPR017927
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR017938 [H]

Pfam domain/function: PF10418 DHODB_Fe-S_bind; PF00970 FAD_binding_6; PF00175 NAD_binding_1 [H]

EC number: NA

Molecular weight: Translated: 30403; Mature: 30403

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENTIISKERLIPGQTSKLVIDAPHIAAKAQPGNFVILRVCEHGERIPLTIADADPEKGT
CCCCCCCHHHCCCCCCCEEEEECCCEEEECCCCCEEEEEEECCCCEEEEEEECCCCCCCE
ITIVYLVMGKSTAMLEDLNEGDAILDLCGPLGRATHIEQGGTVICVGGGTGIAAMHHIAK
EEEEEEEECCCHHHHHHCCCCCCHHHHHCCCCCCCEECCCCEEEEEECCCHHHHHHHHHH
GHHKAGNHVVAIIGARSKDLLLFEKELKEFAPEVLVSTDDGSYGHKGLVTELLRQRLEAD
CCCCCCCEEEEEEECCCCCEEEEHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHCCC
DSVSEVVAVGPVPMMEAVARTTEPFGVKTTVSLNSIMVDGIGMCGACRVTVDNETRFACV
CCHHHEEEECCCHHHHHHHHCCCCCCEEEEEEECEEEECCCCCCCEEEEEECCCCEEEEE
DGPEFDGHKVDFAELRQRLGAFRPLERESYDHHCRCKCNESK
CCCCCCCCEECHHHHHHHHCCCCCCCCCCCCCEEEEEECCCC
>Mature Secondary Structure
MENTIISKERLIPGQTSKLVIDAPHIAAKAQPGNFVILRVCEHGERIPLTIADADPEKGT
CCCCCCCHHHCCCCCCCEEEEECCCEEEECCCCCEEEEEEECCCCEEEEEEECCCCCCCE
ITIVYLVMGKSTAMLEDLNEGDAILDLCGPLGRATHIEQGGTVICVGGGTGIAAMHHIAK
EEEEEEEECCCHHHHHHCCCCCCHHHHHCCCCCCCEECCCCEEEEEECCCHHHHHHHHHH
GHHKAGNHVVAIIGARSKDLLLFEKELKEFAPEVLVSTDDGSYGHKGLVTELLRQRLEAD
CCCCCCCEEEEEEECCCCCEEEEHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHCCC
DSVSEVVAVGPVPMMEAVARTTEPFGVKTTVSLNSIMVDGIGMCGACRVTVDNETRFACV
CCHHHEEEECCCHHHHHHHHCCCCCCEEEEEEECEEEECCCCCCCEEEEEECCCCEEEEE
DGPEFDGHKVDFAELRQRLGAFRPLERESYDHHCRCKCNESK
CCCCCCCCEECHHHHHHHHCCCCCCCCCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]