| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is aegA [H]
Identifier: 78358674
GI number: 78358674
Start: 3598159
End: 3599589
Strand: Reverse
Name: aegA [H]
Synonym: Dde_3635
Alternate gene names: 78358674
Gene position: 3599589-3598159 (Counterclockwise)
Preceding gene: 78358675
Following gene: 78358666
Centisome position: 96.5
GC content: 60.73
Gene sequence:
>1431_bases ATGAAAGCAAGTAAAAAGCCCGTACTGCCCCGTGTGCCCATGCCCAACCAGCCGCCCGCGGAACGCGTGCGTAATTTTGA CGAAGTGGCGCTGGGGTATACGCCGGAAATGGCGCGGCAGGAGGCCGGGCGCTGTCTGCAGTGCAAAAAGCCCCGCTGCG TCAAGGGCTGCCCTGTGGAAGTGCCCATACCGCAGTTTATCGCCGCGCTGGCGCAGGGCGATGTGGAACATGCCTACCGG ATTATCAAAACCACCAACAGCCTGCCTGCCGTGTGCGGGCGGGTGTGCCCTCAGGAATCGCAGTGCGAGGGGGCGTGCAT ACTGCAGGCAAAAGGGCAGCCGGTGGCCATCGGGCGTCTGGAACGTTTTGTGGCCGACGAATACATGCATCGTGACGCCT GCGGTCTGATAACCGGTAAACCGGAATGCCCTTACATTGACCCGGAAAAAAAGGTCGCCTGTATCGGCAGCGGGCCTGCC AGCCTCACTGCGGCGGGGTATCTGGCCGCGCACGGGTGCAAGGTTACTGTTTTCGAGGCCCTGCACGAACTGGGCGGCGT GCTTGTGTACGGTATTCCCGAATTCCGTCTGCCCAAGGAAAAGATTGTCGCCAAGGAAGTGAACGCCCTGCGTGAACTGC AGGTGGAATTTGTCCGCAACAGAGTGGGCGGCAAAACATTTTCCATAAGCGATCTTTTCGCACAGGGGTACAAGGCGGTC TTTATCGGAGTCGGGGCGGGGCTGCCGCGTTTTCTCGGAGTACCGGGAGAAAATCTCAACGGCGTGTTTTCCGCCAATGA GTATCTTACCCGTGTGAATCTGGGCCGGGCGTATTCTTTTCCGGAATATGACACCCCCATTATCCGCGGCCGCCGCGTGA CTGTTTTCGGCGGGGGCAACGTGGCCATGGATGCGGCCCGTACAGCCATGAGGCTGGGCGCCGAATCTGTGCATATCGTC TATCGCCGTACGCAGGCAGAAATGCCTGCACGCCACGAAGAAGTGGAACACGCCATTGAAGAAGGCGTGCAGGTGGCCGA ACTGTGCGGTCCTCTGGAATTCCGTGCCGGTGAAAACGGCAGTCTGGCAGCCGTTGTGCTGCAGAAAATGGAGCTGGGGG AACCCGATGAGTCCGGTCGCCGCCGGCCGGTGGCCGTGCAGGGTGCCACCGTGGAACTGCCCACAGACCTTGCCGTCATT GCGGTCGGCACACGGTCCAACCCCGTACTGCTGGAAAATGAACCTGAATTGAAGCTGACGGGCAGGGGCTATGTGTCGGT GGACGAGGAAACCGGCGAAACAAGCATGCCCGGCGTATATGCCGGTGGTGATATAGTGACCGGTGCCGCCACGGTTATTC TGGCCATGGGGGCCGGTCGCAGGGCGGCCAAGCACATTGCCCGTTCACTGGGGTGCGCGGTGGAAGACTAG
Upstream 100 bases:
>100_bases GACGGACACAAGGTGGATTTTGCGGAACTGCGGCAGCGGCTGGGCGCATTCCGCCCGCTGGAGCGTGAATCCTACGACCA TCACTGCAGGTGCAAGTGTA
Downstream 100 bases:
>100_bases CGTATCTGTCTGTATCTGCAGCATACTTTCAGCGCCCGCGGCAACGCCGCGGGCGCTTTTGCTGTCTCTGCCGTCCGTTG ATCCGGCTGCCGCAGGTGGT
Product: putative oxidoreductase
Products: L-glutamine; 2-oxoglutarate; NADPH; H+
Alternate protein names: NA
Number of amino acids: Translated: 476; Mature: 476
Protein sequence:
>476_residues MKASKKPVLPRVPMPNQPPAERVRNFDEVALGYTPEMARQEAGRCLQCKKPRCVKGCPVEVPIPQFIAALAQGDVEHAYR IIKTTNSLPAVCGRVCPQESQCEGACILQAKGQPVAIGRLERFVADEYMHRDACGLITGKPECPYIDPEKKVACIGSGPA SLTAAGYLAAHGCKVTVFEALHELGGVLVYGIPEFRLPKEKIVAKEVNALRELQVEFVRNRVGGKTFSISDLFAQGYKAV FIGVGAGLPRFLGVPGENLNGVFSANEYLTRVNLGRAYSFPEYDTPIIRGRRVTVFGGGNVAMDAARTAMRLGAESVHIV YRRTQAEMPARHEEVEHAIEEGVQVAELCGPLEFRAGENGSLAAVVLQKMELGEPDESGRRRPVAVQGATVELPTDLAVI AVGTRSNPVLLENEPELKLTGRGYVSVDEETGETSMPGVYAGGDIVTGAATVILAMGAGRRAAKHIARSLGCAVED
Sequences:
>Translated_476_residues MKASKKPVLPRVPMPNQPPAERVRNFDEVALGYTPEMARQEAGRCLQCKKPRCVKGCPVEVPIPQFIAALAQGDVEHAYR IIKTTNSLPAVCGRVCPQESQCEGACILQAKGQPVAIGRLERFVADEYMHRDACGLITGKPECPYIDPEKKVACIGSGPA SLTAAGYLAAHGCKVTVFEALHELGGVLVYGIPEFRLPKEKIVAKEVNALRELQVEFVRNRVGGKTFSISDLFAQGYKAV FIGVGAGLPRFLGVPGENLNGVFSANEYLTRVNLGRAYSFPEYDTPIIRGRRVTVFGGGNVAMDAARTAMRLGAESVHIV YRRTQAEMPARHEEVEHAIEEGVQVAELCGPLEFRAGENGSLAAVVLQKMELGEPDESGRRRPVAVQGATVELPTDLAVI AVGTRSNPVLLENEPELKLTGRGYVSVDEETGETSMPGVYAGGDIVTGAATVILAMGAGRRAAKHIARSLGCAVED >Mature_476_residues MKASKKPVLPRVPMPNQPPAERVRNFDEVALGYTPEMARQEAGRCLQCKKPRCVKGCPVEVPIPQFIAALAQGDVEHAYR IIKTTNSLPAVCGRVCPQESQCEGACILQAKGQPVAIGRLERFVADEYMHRDACGLITGKPECPYIDPEKKVACIGSGPA SLTAAGYLAAHGCKVTVFEALHELGGVLVYGIPEFRLPKEKIVAKEVNALRELQVEFVRNRVGGKTFSISDLFAQGYKAV FIGVGAGLPRFLGVPGENLNGVFSANEYLTRVNLGRAYSFPEYDTPIIRGRRVTVFGGGNVAMDAARTAMRLGAESVHIV YRRTQAEMPARHEEVEHAIEEGVQVAELCGPLEFRAGENGSLAAVVLQKMELGEPDESGRRRPVAVQGATVELPTDLAVI AVGTRSNPVLLENEPELKLTGRGYVSVDEETGETSMPGVYAGGDIVTGAATVILAMGAGRRAAKHIARSLGCAVED
Specific function: Unknown
COG id: COG0493
COG function: function code ER; NADPH-dependent glutamate synthase beta chain and related oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 4 4Fe-4S ferredoxin-type domains [H]
Homologues:
Organism=Homo sapiens, GI119943098, Length=486, Percent_Identity=31.4814814814815, Blast_Score=188, Evalue=1e-47, Organism=Homo sapiens, GI237757300, Length=131, Percent_Identity=33.587786259542, Blast_Score=70, Evalue=4e-12, Organism=Escherichia coli, GI1788811, Length=487, Percent_Identity=35.3182751540041, Blast_Score=274, Evalue=1e-74, Organism=Escherichia coli, GI1789606, Length=469, Percent_Identity=35.8208955223881, Blast_Score=272, Evalue=4e-74, Organism=Escherichia coli, GI87082180, Length=474, Percent_Identity=37.1308016877637, Blast_Score=270, Evalue=2e-73, Organism=Escherichia coli, GI1789243, Length=425, Percent_Identity=33.6470588235294, Blast_Score=174, Evalue=1e-44, Organism=Escherichia coli, GI1788468, Length=459, Percent_Identity=30.5010893246187, Blast_Score=166, Evalue=3e-42, Organism=Caenorhabditis elegans, GI71984108, Length=449, Percent_Identity=31.8485523385301, Blast_Score=171, Evalue=9e-43, Organism=Caenorhabditis elegans, GI17570289, Length=481, Percent_Identity=27.6507276507277, Blast_Score=149, Evalue=2e-36, Organism=Saccharomyces cerevisiae, GI6320030, Length=478, Percent_Identity=29.4979079497908, Blast_Score=162, Evalue=8e-41, Organism=Drosophila melanogaster, GI28574881, Length=484, Percent_Identity=30.7851239669421, Blast_Score=187, Evalue=2e-47, Organism=Drosophila melanogaster, GI24665539, Length=484, Percent_Identity=30.7851239669421, Blast_Score=187, Evalue=2e-47, Organism=Drosophila melanogaster, GI24665547, Length=484, Percent_Identity=30.5785123966942, Blast_Score=187, Evalue=2e-47, Organism=Drosophila melanogaster, GI24665543, Length=484, Percent_Identity=30.5785123966942, Blast_Score=187, Evalue=2e-47, Organism=Drosophila melanogaster, GI24640763, Length=468, Percent_Identity=30.7692307692308, Blast_Score=167, Evalue=1e-41, Organism=Drosophila melanogaster, GI18858217, Length=468, Percent_Identity=30.7692307692308, Blast_Score=167, Evalue=1e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001450 - InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR013027 - InterPro: IPR012285 - InterPro: IPR006006 [H]
Pfam domain/function: PF00037 Fer4; PF07992 Pyr_redox_2 [H]
EC number: 1.4.1.13
Molecular weight: Translated: 51058; Mature: 51058
Theoretical pI: Translated: 7.12; Mature: 7.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKASKKPVLPRVPMPNQPPAERVRNFDEVALGYTPEMARQEAGRCLQCKKPRCVKGCPVE CCCCCCCCCCCCCCCCCCHHHHHCCHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC VPIPQFIAALAQGDVEHAYRIIKTTNSLPAVCGRVCPQESQCEGACILQAKGQPVAIGRL CCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEEEEECCCEEEHHHH ERFVADEYMHRDACGLITGKPECPYIDPEKKVACIGSGPASLTAAGYLAAHGCKVTVFEA HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCEEHHHHH LHELGGVLVYGIPEFRLPKEKIVAKEVNALRELQVEFVRNRVGGKTFSISDLFAQGYKAV HHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHCCCEEE FIGVGAGLPRFLGVPGENLNGVFSANEYLTRVNLGRAYSFPEYDTPIIRGRRVTVFGGGN EEECCCCCHHHHCCCCCCCCCEEECCHHHEEEECCCCCCCCCCCCCEECCCEEEEEECCC VAMDAARTAMRLGAESVHIVYRRTQAEMPARHEEVEHAIEEGVQVAELCGPLEFRAGENG EEHHHHHHHHHHCCCEEEEEEEEHHHCCCHHHHHHHHHHHHCCHHHHHCCCCEECCCCCC SLAAVVLQKMELGEPDESGRRRPVAVQGATVELPTDLAVIAVGTRSNPVLLENEPELKLT CCHHHHHHHHHCCCCCCCCCCCCEEECCCEEECCCCEEEEEECCCCCCEEEECCCCEEEE GRGYVSVDEETGETSMPGVYAGGDIVTGAATVILAMGAGRRAAKHIARSLGCAVED CCCEEEECCCCCCCCCCCEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKASKKPVLPRVPMPNQPPAERVRNFDEVALGYTPEMARQEAGRCLQCKKPRCVKGCPVE CCCCCCCCCCCCCCCCCCHHHHHCCHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC VPIPQFIAALAQGDVEHAYRIIKTTNSLPAVCGRVCPQESQCEGACILQAKGQPVAIGRL CCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEEEEECCCEEEHHHH ERFVADEYMHRDACGLITGKPECPYIDPEKKVACIGSGPASLTAAGYLAAHGCKVTVFEA HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCEEHHHHH LHELGGVLVYGIPEFRLPKEKIVAKEVNALRELQVEFVRNRVGGKTFSISDLFAQGYKAV HHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHCCCEEE FIGVGAGLPRFLGVPGENLNGVFSANEYLTRVNLGRAYSFPEYDTPIIRGRRVTVFGGGN EEECCCCCHHHHCCCCCCCCCEEECCHHHEEEECCCCCCCCCCCCCEECCCEEEEEECCC VAMDAARTAMRLGAESVHIVYRRTQAEMPARHEEVEHAIEEGVQVAELCGPLEFRAGENG EEHHHHHHHHHHCCCEEEEEEEEHHHCCCHHHHHHHHHHHHCCHHHHHCCCCEECCCCCC SLAAVVLQKMELGEPDESGRRRPVAVQGATVELPTDLAVIAVGTRSNPVLLENEPELKLT CCHHHHHHHHHCCCCCCCCCCCCEEECCCEEECCCCEEEEEECCCCCCEEEECCCCEEEE GRGYVSVDEETGETSMPGVYAGGDIVTGAATVILAMGAGRRAAKHIARSLGCAVED CCCEEEECCCCCCCCCCCEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-glutamate; NADP+
Specific reaction: 2 L-glutamate + NADP+ = L-glutamine + 2-oxoglutarate + NADPH + H+
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8955321; 9205837; 9278503 [H]