| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is maeB [H]
Identifier: 78358676
GI number: 78358676
Start: 3600764
End: 3602083
Strand: Reverse
Name: maeB [H]
Synonym: Dde_3637
Alternate gene names: 78358676
Gene position: 3602083-3600764 (Counterclockwise)
Preceding gene: 78358677
Following gene: 78358675
Centisome position: 96.56
GC content: 57.05
Gene sequence:
>1320_bases ATGGCTCTTTTCACAAAAGAAGAAGCACTGAAATATCATGAGGCTCCGCGCCCCGGTAAGCTGGAAGTCGTTCCCGCAAA GCCCTGCAGAAACCAGAAAGATCTTTCAATGGCGTATTCGCCCGGCGTGGCCGAAGCCTGCAAAGCCATCCGCGAAGATC CGGCAAAGGCCGCGCTGTATACCGGCCGTTCCAACCTTGTGGGCGTGGTTTCAGACGGTTCCGCGGTTCTGGGGCTGGGT AACATCGGCCCGCTGGCAGGAAAGCCGGTTATGGAAGGCAAAGGCGTGCTGTTCAAAACCTTTGCCGACATCGACGTGTT TGACATCAATCTGGACGTGCGCAGCGCCGATCAGCTTATCGAGGTGGTGAAAACGCTGGAGCCCACCTTCGGCGGGATCA ATCTGGAAGACATCAAGGCTCCGGAATGCTTTTACATCGAAGAGACGCTCAAACGCGAGATGAATATTCCCGTGTTTCAT GATGATCAGCACGGCACCGCCGTGATTTCCGGAGCGGGGCTGCTCAACGCGCTGGATATAACCAACCGCAGGGCCGAAGA CATGAAGGTTGTGATTGTGGGAGCCGGAGCTGCAGGCATTGCCTGTGCCACATTCTATGTTGCACTCGGCGTCGATCCTG CAAATATCTACATGTTCGACTCGCGGGGGCTTATCCATGCCGGACGCAGCGATCTGAACAGCTACAAGAAACGGTTTGCT CAGAAAAAAGATGCCGGAAGTCTTGAAGATGTGATGAAAGGGGCGGACATGTTCCTTGGTCTGTCCACAAAAGACCTTGT TTCCAAAGACATGGTGCGGGCCATGGCAAAGGATCCGGTGCTGTTCGCCATGGCAAATCCCGATCCGGAAATTGCATATC CCGATGCCAAAGAAGCCTGCCCCGGCTGCATCATGGGTACAGGGCGTTCCGATTTTCCCAATCAGGTGAACAATGTTTCC GGTTTTCCGTATATTTTCCGCGGAGCACTGGACGTGGGCGCCACGGAAATCAACGAGGCCATGAAAATCGCCGCTGCCAG ATCGCTGGCGGCGCTGGCGCGCGAGCCTGTTCCTGCAGAAATCTGCGCATTGTACGGTGTGGATTCTCTGGAGTTCGGCG TGGACTATGTCATACCGAAGCCGCTGGACCCGCGTGTGCTGGAGTGGGAAACTCCCGCCGTGGCGCAGGCGGCCATGGAT TCCGGCGTGGCCACGGTACCTGTGGCTGATATGAAAGCGTATGCCGCTTCGCTGCGGGTCCGCGTGGATGCTGCGGCGCG CCGTGCGGCAGCCGTGGTGGACAGTTATTCCGGCGTCTGA
Upstream 100 bases:
>100_bases GAAGGTGCGTGATTTTCCGCTGCTGGTGATCAACGATGCCTGCGGCGGCGAGCTGTATGTAACCCCCAAACTTGATCTGT GACCACTCAGGAGGCTGACA
Downstream 100 bases:
>100_bases TTTCTGCCGCTGCCTGCATCCTGCGGCGGTCGTGCAGAATGCAGGCAGAAAAATACCGTTGCTTGCGCATCTTCTGCGGC AGCGTAATAATACTCGTTGC
Product: malate dehydrogenase
Products: NA
Alternate protein names: NADP-ME [H]
Number of amino acids: Translated: 439; Mature: 438
Protein sequence:
>439_residues MALFTKEEALKYHEAPRPGKLEVVPAKPCRNQKDLSMAYSPGVAEACKAIREDPAKAALYTGRSNLVGVVSDGSAVLGLG NIGPLAGKPVMEGKGVLFKTFADIDVFDINLDVRSADQLIEVVKTLEPTFGGINLEDIKAPECFYIEETLKREMNIPVFH DDQHGTAVISGAGLLNALDITNRRAEDMKVVIVGAGAAGIACATFYVALGVDPANIYMFDSRGLIHAGRSDLNSYKKRFA QKKDAGSLEDVMKGADMFLGLSTKDLVSKDMVRAMAKDPVLFAMANPDPEIAYPDAKEACPGCIMGTGRSDFPNQVNNVS GFPYIFRGALDVGATEINEAMKIAAARSLAALAREPVPAEICALYGVDSLEFGVDYVIPKPLDPRVLEWETPAVAQAAMD SGVATVPVADMKAYAASLRVRVDAAARRAAAVVDSYSGV
Sequences:
>Translated_439_residues MALFTKEEALKYHEAPRPGKLEVVPAKPCRNQKDLSMAYSPGVAEACKAIREDPAKAALYTGRSNLVGVVSDGSAVLGLG NIGPLAGKPVMEGKGVLFKTFADIDVFDINLDVRSADQLIEVVKTLEPTFGGINLEDIKAPECFYIEETLKREMNIPVFH DDQHGTAVISGAGLLNALDITNRRAEDMKVVIVGAGAAGIACATFYVALGVDPANIYMFDSRGLIHAGRSDLNSYKKRFA QKKDAGSLEDVMKGADMFLGLSTKDLVSKDMVRAMAKDPVLFAMANPDPEIAYPDAKEACPGCIMGTGRSDFPNQVNNVS GFPYIFRGALDVGATEINEAMKIAAARSLAALAREPVPAEICALYGVDSLEFGVDYVIPKPLDPRVLEWETPAVAQAAMD SGVATVPVADMKAYAASLRVRVDAAARRAAAVVDSYSGV >Mature_438_residues ALFTKEEALKYHEAPRPGKLEVVPAKPCRNQKDLSMAYSPGVAEACKAIREDPAKAALYTGRSNLVGVVSDGSAVLGLGN IGPLAGKPVMEGKGVLFKTFADIDVFDINLDVRSADQLIEVVKTLEPTFGGINLEDIKAPECFYIEETLKREMNIPVFHD DQHGTAVISGAGLLNALDITNRRAEDMKVVIVGAGAAGIACATFYVALGVDPANIYMFDSRGLIHAGRSDLNSYKKRFAQ KKDAGSLEDVMKGADMFLGLSTKDLVSKDMVRAMAKDPVLFAMANPDPEIAYPDAKEACPGCIMGTGRSDFPNQVNNVSG FPYIFRGALDVGATEINEAMKIAAARSLAALAREPVPAEICALYGVDSLEFGVDYVIPKPLDPRVLEWETPAVAQAAMDS GVATVPVADMKAYAASLRVRVDAAARRAAAVVDSYSGV
Specific function: Unknown
COG id: COG0281
COG function: function code C; Malic enzyme
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the phosphate acetyltransferase and butyryltransferase family [H]
Homologues:
Organism=Homo sapiens, GI62420882, Length=351, Percent_Identity=27.9202279202279, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI62420880, Length=351, Percent_Identity=27.9202279202279, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI239049447, Length=351, Percent_Identity=27.9202279202279, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI4505143, Length=344, Percent_Identity=25, Blast_Score=76, Evalue=6e-14, Organism=Homo sapiens, GI4505145, Length=346, Percent_Identity=26.5895953757225, Blast_Score=68, Evalue=2e-11, Organism=Escherichia coli, GI1788806, Length=415, Percent_Identity=57.3493975903614, Blast_Score=476, Evalue=1e-135, Organism=Caenorhabditis elegans, GI17537199, Length=410, Percent_Identity=27.3170731707317, Blast_Score=69, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6322823, Length=274, Percent_Identity=30.2919708029197, Blast_Score=79, Evalue=1e-15, Organism=Drosophila melanogaster, GI24646388, Length=345, Percent_Identity=27.536231884058, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI24646386, Length=345, Percent_Identity=27.536231884058, Blast_Score=77, Evalue=3e-14, Organism=Drosophila melanogaster, GI281362672, Length=414, Percent_Identity=26.0869565217391, Blast_Score=77, Evalue=3e-14, Organism=Drosophila melanogaster, GI281362674, Length=414, Percent_Identity=26.0869565217391, Blast_Score=76, Evalue=4e-14, Organism=Drosophila melanogaster, GI21356279, Length=414, Percent_Identity=26.0869565217391, Blast_Score=76, Evalue=4e-14, Organism=Drosophila melanogaster, GI78707242, Length=342, Percent_Identity=25.7309941520468, Blast_Score=75, Evalue=7e-14, Organism=Drosophila melanogaster, GI78707238, Length=342, Percent_Identity=25.7309941520468, Blast_Score=75, Evalue=7e-14, Organism=Drosophila melanogaster, GI78707240, Length=340, Percent_Identity=25.8823529411765, Blast_Score=75, Evalue=9e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015884 - InterPro: IPR012301 - InterPro: IPR012302 - InterPro: IPR012188 - InterPro: IPR016040 - InterPro: IPR002505 [H]
Pfam domain/function: PF00390 malic; PF03949 Malic_M; PF01515 PTA_PTB [H]
EC number: =1.1.1.40 [H]
Molecular weight: Translated: 46754; Mature: 46623
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALFTKEEALKYHEAPRPGKLEVVPAKPCRNQKDLSMAYSPGVAEACKAIREDPAKAALY CCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCEEECCCHHHHHHHHHCCCCCEEEE TGRSNLVGVVSDGSAVLGLGNIGPLAGKPVMEGKGVLFKTFADIDVFDINLDVRSADQLI ECCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCEEEEEEECCCCHHHHH EVVKTLEPTFGGINLEDIKAPECFYIEETLKREMNIPVFHDDQHGTAVISGAGLLNALDI HHHHHHCCCCCCCCHHHCCCCCEEEHHHHHHHHCCCCEEECCCCCEEEEECCCCHHHHHH TNRRAEDMKVVIVGAGAAGIACATFYVALGVDPANIYMFDSRGLIHAGRSDLNSYKKRFA CCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCEEEEECCCCCEECCHHHHHHHHHHHH QKKDAGSLEDVMKGADMFLGLSTKDLVSKDMVRAMAKDPVLFAMANPDPEIAYPDAKEAC HCCCCCCHHHHHCCCHHEECCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHC PGCIMGTGRSDFPNQVNNVSGFPYIFRGALDVGATEINEAMKIAAARSLAALAREPVPAE CCEEECCCCCCCCCHHHCCCCCCCEEECHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHH ICALYGVDSLEFGVDYVIPKPLDPRVLEWETPAVAQAAMDSGVATVPVADMKAYAASLRV HHHHHCCCHHHCCCEEECCCCCCCCEEECCCCHHHHHHHHCCCEEEEHHHHHHHHHHHEE RVDAAARRAAAVVDSYSGV EEHHHHHHHHHHHHHCCCC >Mature Secondary Structure ALFTKEEALKYHEAPRPGKLEVVPAKPCRNQKDLSMAYSPGVAEACKAIREDPAKAALY CCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCEEECCCHHHHHHHHHCCCCCEEEE TGRSNLVGVVSDGSAVLGLGNIGPLAGKPVMEGKGVLFKTFADIDVFDINLDVRSADQLI ECCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCEEEEEEECCCCHHHHH EVVKTLEPTFGGINLEDIKAPECFYIEETLKREMNIPVFHDDQHGTAVISGAGLLNALDI HHHHHHCCCCCCCCHHHCCCCCEEEHHHHHHHHCCCCEEECCCCCEEEEECCCCHHHHHH TNRRAEDMKVVIVGAGAAGIACATFYVALGVDPANIYMFDSRGLIHAGRSDLNSYKKRFA CCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCEEEEECCCCCEECCHHHHHHHHHHHH QKKDAGSLEDVMKGADMFLGLSTKDLVSKDMVRAMAKDPVLFAMANPDPEIAYPDAKEAC HCCCCCCHHHHHCCCHHEECCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHC PGCIMGTGRSDFPNQVNNVSGFPYIFRGALDVGATEINEAMKIAAARSLAALAREPVPAE CCEEECCCCCCCCCHHHCCCCCCCEEECHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHH ICALYGVDSLEFGVDYVIPKPLDPRVLEWETPAVAQAAMDSGVATVPVADMKAYAASLRV HHHHHCCCHHHCCCEEECCCCCCCCEEECCCCHHHHHHHHCCCEEEEHHHHHHHHHHHEE RVDAAARRAAAVVDSYSGV EEHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 36376 [H]