| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is pgi [H]
Identifier: 78358636
GI number: 78358636
Start: 3553217
End: 3554569
Strand: Direct
Name: pgi [H]
Synonym: Dde_3597
Alternate gene names: 78358636
Gene position: 3553217-3554569 (Clockwise)
Preceding gene: 78358635
Following gene: 78358637
Centisome position: 95.25
GC content: 63.34
Gene sequence:
>1353_bases ATGAGCAACAGCGCCTTTCTTAACTGGACCCACGCCCGTCACGGCCGCATCTCCGGCACAGACCCTGCGTCCCTCACCCC CCGTCTGGGTGAAGCCGCCAACCTGCTGGGCCTTGAACTGGCCGCGGGCAGGCTGCCGTTCATCGACATGCCGTATGCTG ACGGCATGACCGCCCGCCTGCAGGAGCTGGAACCGCTGCTGCGCCGTTTTGAACACATGGTGGTGCTGGGCATAGGCGGT TCCGCGCTGGGTGCCCGCGCGTTGCAGAAGGCTTTTTTTCCCGCGCAGGACAGACCCGCCCACACCGGCCCGTGGCTGTG GATAGCGGACAACGTGGACGCCGACAGTCTGGAAGCATGGCTGCAGTCACTGCCCGCCGAAAAAACCGTGGTGGTGGTCA TCAGTAAATCCGGCGGCACCATAGAAACCATCGGGCAGTATTTTCTGATACGCGACTGGCTGCGGACGGCACGCGGCGAC GCATGGACAAATCATGTCATCGCCGTCACCGACGAACGCAGCGGTTTTCTGCGTGAAGAGGCAGACACGCACGGCCTTGC ATCCATGCCCGTGCCCGACCATCTGGGCGGACGGTATTCCGTACTTTCCGCCGTGGGGCTCATTCCCGCTGCCTTCACCG GCATGGACTGGCAGGCGCTTGTACGCGGAGCAAAAACCGTGGGCGCCCCCCTGTGCAGCAGCCCCGATGCGGCCACACTG GGCGCGCACCCCGCGTGGCATCTGGCCGCATGGAACCACGCGCTCATGCAGGCCGGATACAGCCAGCTCATTTTCTTTTC ATACATGCCGCTGTGGGCGCACTTCGGATTCTGGTTCGCCCAGCTGTGGGCCGAAAGTCTGGGCAAGGAAGGCAAAGGCT CCATGCCGCTGCCCGCAGTGGGAGTCACTGACCAGCATTCCACCCAGCAGATGTTTCTGGACGGTCCCCGCGACAAGGCG TGCCTGTTCCTCACCTGCTCTTCACTGCCGCAGGGGCGCACCTTTCCCGGCGACATGCCCCCCAAGTGGGATTTTCTGCG GGGCAGACGCTTCGGCGACCTGCTGGAAGCAGAAGCACTGGGCACCCGCATGGCCCTGCACAAAACCGGCACCCCGCTGG TTGAAATCGGCATGGCGCAGCCATCCGAAGAACAGGCAGGCAGGCTCATGGCCCTGCTTGAAATAACCACACTGCTCACA GGCTGGCTGCTGGATATCAATCCGCTGGACCAGCCCGCAGTAGAGCTGGGCAAACGGCTGGCAAACGCCAGACTGGGTGC TCCCGGCTATGATACCGAAACAGCGGACCTCGGCGCATTTCTTGCCGCGCAGGGATCGCGTCAGGAGTTCTAA
Upstream 100 bases:
>100_bases TAACTCTCCCGATAGGGAATAATGGCCGGCATATGTCCGCCTGTCCGCCTCCCGCGGCAGGCGGTCACATGCCGACCACG ACAACCAAAGGAGCGAGCAC
Downstream 100 bases:
>100_bases CCATTGCCAGCATTATACAGCACGGGTGAGCGCCCGCTCCGGTTCGCCCGCTTTCTTTCGTGGGTCTCACTCGTGCTCAT TCTGGTCACCAGCACGGCGT
Product: glucose-6-phosphate isomerase
Products: NA
Alternate protein names: GPI; Phosphoglucose isomerase; PGI; Phosphohexose isomerase; PHI [H]
Number of amino acids: Translated: 450; Mature: 449
Protein sequence:
>450_residues MSNSAFLNWTHARHGRISGTDPASLTPRLGEAANLLGLELAAGRLPFIDMPYADGMTARLQELEPLLRRFEHMVVLGIGG SALGARALQKAFFPAQDRPAHTGPWLWIADNVDADSLEAWLQSLPAEKTVVVVISKSGGTIETIGQYFLIRDWLRTARGD AWTNHVIAVTDERSGFLREEADTHGLASMPVPDHLGGRYSVLSAVGLIPAAFTGMDWQALVRGAKTVGAPLCSSPDAATL GAHPAWHLAAWNHALMQAGYSQLIFFSYMPLWAHFGFWFAQLWAESLGKEGKGSMPLPAVGVTDQHSTQQMFLDGPRDKA CLFLTCSSLPQGRTFPGDMPPKWDFLRGRRFGDLLEAEALGTRMALHKTGTPLVEIGMAQPSEEQAGRLMALLEITTLLT GWLLDINPLDQPAVELGKRLANARLGAPGYDTETADLGAFLAAQGSRQEF
Sequences:
>Translated_450_residues MSNSAFLNWTHARHGRISGTDPASLTPRLGEAANLLGLELAAGRLPFIDMPYADGMTARLQELEPLLRRFEHMVVLGIGG SALGARALQKAFFPAQDRPAHTGPWLWIADNVDADSLEAWLQSLPAEKTVVVVISKSGGTIETIGQYFLIRDWLRTARGD AWTNHVIAVTDERSGFLREEADTHGLASMPVPDHLGGRYSVLSAVGLIPAAFTGMDWQALVRGAKTVGAPLCSSPDAATL GAHPAWHLAAWNHALMQAGYSQLIFFSYMPLWAHFGFWFAQLWAESLGKEGKGSMPLPAVGVTDQHSTQQMFLDGPRDKA CLFLTCSSLPQGRTFPGDMPPKWDFLRGRRFGDLLEAEALGTRMALHKTGTPLVEIGMAQPSEEQAGRLMALLEITTLLT GWLLDINPLDQPAVELGKRLANARLGAPGYDTETADLGAFLAAQGSRQEF >Mature_449_residues SNSAFLNWTHARHGRISGTDPASLTPRLGEAANLLGLELAAGRLPFIDMPYADGMTARLQELEPLLRRFEHMVVLGIGGS ALGARALQKAFFPAQDRPAHTGPWLWIADNVDADSLEAWLQSLPAEKTVVVVISKSGGTIETIGQYFLIRDWLRTARGDA WTNHVIAVTDERSGFLREEADTHGLASMPVPDHLGGRYSVLSAVGLIPAAFTGMDWQALVRGAKTVGAPLCSSPDAATLG AHPAWHLAAWNHALMQAGYSQLIFFSYMPLWAHFGFWFAQLWAESLGKEGKGSMPLPAVGVTDQHSTQQMFLDGPRDKAC LFLTCSSLPQGRTFPGDMPPKWDFLRGRRFGDLLEAEALGTRMALHKTGTPLVEIGMAQPSEEQAGRLMALLEITTLLTG WLLDINPLDQPAVELGKRLANARLGAPGYDTETADLGAFLAAQGSRQEF
Specific function: Involved in glycolysis and in gluconeogenesis. [C]
COG id: COG0166
COG function: function code G; Glucose-6-phosphate isomerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GPI family [H]
Homologues:
Organism=Caenorhabditis elegans, GI71996703, Length=385, Percent_Identity=24.1558441558442, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI71996708, Length=387, Percent_Identity=24.031007751938, Blast_Score=74, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001672 - InterPro: IPR018189 [H]
Pfam domain/function: PF00342 PGI [H]
EC number: =5.3.1.9 [H]
Molecular weight: Translated: 48844; Mature: 48713
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: PS00765 P_GLUCOSE_ISOMERASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNSAFLNWTHARHGRISGTDPASLTPRLGEAANLLGLELAAGRLPFIDMPYADGMTARL CCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCCHHHHH QELEPLLRRFEHMVVLGIGGSALGARALQKAFFPAQDRPAHTGPWLWIADNVDADSLEAW HHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHH LQSLPAEKTVVVVISKSGGTIETIGQYFLIRDWLRTARGDAWTNHVIAVTDERSGFLREE HHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHH ADTHGLASMPVPDHLGGRYSVLSAVGLIPAAFTGMDWQALVRGAKTVGAPLCSSPDAATL CCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCC GAHPAWHLAAWNHALMQAGYSQLIFFSYMPLWAHFGFWFAQLWAESLGKEGKGSMPLPAV CCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC GVTDQHSTQQMFLDGPRDKACLFLTCSSLPQGRTFPGDMPPKWDFLRGRRFGDLLEAEAL CCCCCCCCHHHEECCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHH GTRMALHKTGTPLVEIGMAQPSEEQAGRLMALLEITTLLTGWLLDINPLDQPAVELGKRL HHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHH ANARLGAPGYDTETADLGAFLAAQGSRQEF HHCCCCCCCCCCCHHHHHHHHHCCCCCCCC >Mature Secondary Structure SNSAFLNWTHARHGRISGTDPASLTPRLGEAANLLGLELAAGRLPFIDMPYADGMTARL CCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCCHHHHH QELEPLLRRFEHMVVLGIGGSALGARALQKAFFPAQDRPAHTGPWLWIADNVDADSLEAW HHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHH LQSLPAEKTVVVVISKSGGTIETIGQYFLIRDWLRTARGDAWTNHVIAVTDERSGFLREE HHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHH ADTHGLASMPVPDHLGGRYSVLSAVGLIPAAFTGMDWQALVRGAKTVGAPLCSSPDAATL CCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCC GAHPAWHLAAWNHALMQAGYSQLIFFSYMPLWAHFGFWFAQLWAESLGKEGKGSMPLPAV CCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC GVTDQHSTQQMFLDGPRDKACLFLTCSSLPQGRTFPGDMPPKWDFLRGRRFGDLLEAEAL CCCCCCCCHHHEECCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHH GTRMALHKTGTPLVEIGMAQPSEEQAGRLMALLEITTLLTGWLLDINPLDQPAVELGKRL HHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHH ANARLGAPGYDTETADLGAFLAAQGSRQEF HHCCCCCCCCCCCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA