Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

Click here to switch to the map view.

The map label for this gene is 78358163

Identifier: 78358163

GI number: 78358163

Start: 3114360

End: 3114935

Strand: Direct

Name: 78358163

Synonym: Dde_3123

Alternate gene names: NA

Gene position: 3114360-3114935 (Clockwise)

Preceding gene: 78358162

Following gene: 78358164

Centisome position: 83.49

GC content: 58.68

Gene sequence:

>576_bases
ATGGCCAGAAGCCGTGATGCACATATATGCGCCCGCTGTGCCGCACATTCCGGCACCTGCTGCCGGATGCAGCCCGGCAA
TGAAGAGCTGTGCTTTCCGCTTTCGCGCAGCGAATGGCAGCGCATTGTGGAGCATTGCAATGACAAGGGCGGGTTTGCCA
GCCAGCCCAATACAAAACCGTTCCTGCAGTGTATGAAACGCCTTTTTCCCGCCGATGAAAAACGGCTGGAGGCCATTTTT
CCCCCTCACGGGGAGCATCTGCGCCTTGCCTCGGACAATGAAGGCCGCTGCCTTTTCCTTTCCGCTGCCGGCTGCACTCT
TCCCCGCGAGACACGTCCGTGGTATTGCCGCCTGTTCCCTTTCTGGTTTATGCCCAACGGCATGCTGACCATGTTCACTC
CGGACGAGTGTCTCGTCTATCTGGAGTCACGCTCCGTCAGAGACGCCATGCAGGAACTGGGCGTTACAGAAAACGAACTG
CGCCTGATGTTCGGCCGCCTGCGACTTGCGTGGGGGCTTGATCCGGAGCATGACGAAGACGGCAACCGCTATCCGCTTTG
CGACCATACCCGATAA

Upstream 100 bases:

>100_bases
ACCGCACCACGCACAAAGGCGCCCCCGGGCGCGAATTCACCATTGTGGTGCTGCGCGGCTTCAAAGGCACATGGCCGCGC
GAACAACAGGAGCGTTACTG

Downstream 100 bases:

>100_bases
AAATATCATGAAACGTTTTCTCACATACTTTCTTGTCAGCGTCACAGGTCTTGCCCTGCTGGGCATGCTCGGGCTGGGCG
GCATCTATATATGGGCCACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 191; Mature: 190

Protein sequence:

>191_residues
MARSRDAHICARCAAHSGTCCRMQPGNEELCFPLSRSEWQRIVEHCNDKGGFASQPNTKPFLQCMKRLFPADEKRLEAIF
PPHGEHLRLASDNEGRCLFLSAAGCTLPRETRPWYCRLFPFWFMPNGMLTMFTPDECLVYLESRSVRDAMQELGVTENEL
RLMFGRLRLAWGLDPEHDEDGNRYPLCDHTR

Sequences:

>Translated_191_residues
MARSRDAHICARCAAHSGTCCRMQPGNEELCFPLSRSEWQRIVEHCNDKGGFASQPNTKPFLQCMKRLFPADEKRLEAIF
PPHGEHLRLASDNEGRCLFLSAAGCTLPRETRPWYCRLFPFWFMPNGMLTMFTPDECLVYLESRSVRDAMQELGVTENEL
RLMFGRLRLAWGLDPEHDEDGNRYPLCDHTR
>Mature_190_residues
ARSRDAHICARCAAHSGTCCRMQPGNEELCFPLSRSEWQRIVEHCNDKGGFASQPNTKPFLQCMKRLFPADEKRLEAIFP
PHGEHLRLASDNEGRCLFLSAAGCTLPRETRPWYCRLFPFWFMPNGMLTMFTPDECLVYLESRSVRDAMQELGVTENELR
LMFGRLRLAWGLDPEHDEDGNRYPLCDHTR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22085; Mature: 21953

Theoretical pI: Translated: 6.83; Mature: 6.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.3 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
10.5 %Cys+Met (Translated Protein)
6.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
10.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARSRDAHICARCAAHSGTCCRMQPGNEELCFPLSRSEWQRIVEHCNDKGGFASQPNTKP
CCCCCCHHHHHHHHCCCCCEEEECCCCCCEEEECCHHHHHHHHHHCCCCCCCCCCCCCHH
FLQCMKRLFPADEKRLEAIFPPHGEHLRLASDNEGRCLFLSAAGCTLPRETRPWYCRLFP
HHHHHHHHCCCCCHHHEEECCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCEEEEEE
FWFMPNGMLTMFTPDECLVYLESRSVRDAMQELGVTENELRLMFGRLRLAWGLDPEHDED
HEECCCCEEEEECCHHEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHEEECCCCCCCCC
GNRYPLCDHTR
CCCCCCCCCCC
>Mature Secondary Structure 
ARSRDAHICARCAAHSGTCCRMQPGNEELCFPLSRSEWQRIVEHCNDKGGFASQPNTKP
CCCCCHHHHHHHHCCCCCEEEECCCCCCEEEECCHHHHHHHHHHCCCCCCCCCCCCCHH
FLQCMKRLFPADEKRLEAIFPPHGEHLRLASDNEGRCLFLSAAGCTLPRETRPWYCRLFP
HHHHHHHHCCCCCHHHEEECCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCEEEEEE
FWFMPNGMLTMFTPDECLVYLESRSVRDAMQELGVTENELRLMFGRLRLAWGLDPEHDED
HEECCCCEEEEECCHHEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHEEECCCCCCCCC
GNRYPLCDHTR
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA