| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78358045
Identifier: 78358045
GI number: 78358045
Start: 2990861
End: 2991679
Strand: Direct
Name: 78358045
Synonym: Dde_3005
Alternate gene names: NA
Gene position: 2990861-2991679 (Clockwise)
Preceding gene: 78358044
Following gene: 78358046
Centisome position: 80.18
GC content: 59.1
Gene sequence:
>819_bases GTGACGCAGAATCCGGTAAAACCCGTACACGGGTGGCGGCGCACGCTGCATGAAATCATCTTTGAGGCGGACACCCCTGC GGGCCGCCTTTTTGATATTATACTTATCATCGCCATTCTCTTCAGCGTGCTGGTAGTCTTGCTGGACAGCGTGACCACTG TCCGCATGCGGTACGCCGGTCTGCTGTTCACGCTGGAATGGCTGTTCACCCTGCTGTTCACGGTGGAATATATACTGCGG CTGCTGTGTGTGCTGCGCCCTGCCGCGTACGCCAGAAGCTTTTTCGGGGTGGTGGACCTGCTGGCCATACTGCCCACATG GGCCACCCTGCTGCTGCCCGGCACGCATTACCTTGCCGTGGTGCGGCTGTTGCGCGTACTGCGCATATTCAGGGTACTCA AACTGGCCCAGTATGTTTCCGAGGCACGGCATCTCATCCGCGCATTACGGGACAGCAGGCGCAAAATTCTGGTTTTTCTG CTTGCGGTACTGTCGCTGGTCACCATATTCGGCACGCTCATGTATGTCATCGAAGGTGAAAAATACGGCTTCACCTCCAT TCCGCGCAGCATGTACTGGGCCGTGGTCACGCTGACCACGGTGGGGTACGGCGACATTTCGCCCGGAACCCCGCTGGGAC AGGGCATAGCTTCATTCATAATGCTGCTGGGCTACGGTATCATTGCCGTTCCCACCGGCATTGTCACCTCCGCGCTGGTC AGACCGCGTCCGGTAAGCACGCAGGCCTGCCCCGCATGCGGAAGAGACGGCCACGACGTGGACGCAGTCCACTGCAAGTA CTGCGGCACGGCACTGTAA
Upstream 100 bases:
>100_bases TTACACCGCTGCGGCGCGCGTATCTGGGTGATGCCGAAGCCGCCGAGGCAAAAGCCAGAGCCGTTGCCGAACAGGCAAAG GCTGGAACAACGGAACGCCC
Downstream 100 bases:
>100_bases ACCGGCCTGTGCCGGGCGCAGGAGCAACAAATGGAAATACGCATGGCTCTGGCCATAACCGCTGCCGCCGTGGCCGCCTT TGTCATCCGCAGGGCAGCGC
Product: potassium channel protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 272; Mature: 271
Protein sequence:
>272_residues MTQNPVKPVHGWRRTLHEIIFEADTPAGRLFDIILIIAILFSVLVVLLDSVTTVRMRYAGLLFTLEWLFTLLFTVEYILR LLCVLRPAAYARSFFGVVDLLAILPTWATLLLPGTHYLAVVRLLRVLRIFRVLKLAQYVSEARHLIRALRDSRRKILVFL LAVLSLVTIFGTLMYVIEGEKYGFTSIPRSMYWAVVTLTTVGYGDISPGTPLGQGIASFIMLLGYGIIAVPTGIVTSALV RPRPVSTQACPACGRDGHDVDAVHCKYCGTAL
Sequences:
>Translated_272_residues MTQNPVKPVHGWRRTLHEIIFEADTPAGRLFDIILIIAILFSVLVVLLDSVTTVRMRYAGLLFTLEWLFTLLFTVEYILR LLCVLRPAAYARSFFGVVDLLAILPTWATLLLPGTHYLAVVRLLRVLRIFRVLKLAQYVSEARHLIRALRDSRRKILVFL LAVLSLVTIFGTLMYVIEGEKYGFTSIPRSMYWAVVTLTTVGYGDISPGTPLGQGIASFIMLLGYGIIAVPTGIVTSALV RPRPVSTQACPACGRDGHDVDAVHCKYCGTAL >Mature_271_residues TQNPVKPVHGWRRTLHEIIFEADTPAGRLFDIILIIAILFSVLVVLLDSVTTVRMRYAGLLFTLEWLFTLLFTVEYILRL LCVLRPAAYARSFFGVVDLLAILPTWATLLLPGTHYLAVVRLLRVLRIFRVLKLAQYVSEARHLIRALRDSRRKILVFLL AVLSLVTIFGTLMYVIEGEKYGFTSIPRSMYWAVVTLTTVGYGDISPGTPLGQGIASFIMLLGYGIIAVPTGIVTSALVR PRPVSTQACPACGRDGHDVDAVHCKYCGTAL
Specific function: Unknown
COG id: COG1226
COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cyclic nucleotide-binding domain [H]
Homologues:
Organism=Homo sapiens, GI27436974, Length=225, Percent_Identity=32.4444444444444, Blast_Score=113, Evalue=2e-25, Organism=Homo sapiens, GI4826784, Length=225, Percent_Identity=31.5555555555556, Blast_Score=108, Evalue=6e-24, Organism=Homo sapiens, GI20070166, Length=179, Percent_Identity=36.8715083798883, Blast_Score=105, Evalue=3e-23, Organism=Homo sapiens, GI27436981, Length=188, Percent_Identity=32.4468085106383, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI27436986, Length=188, Percent_Identity=31.9148936170213, Blast_Score=99, Evalue=4e-21, Organism=Homo sapiens, GI9789987, Length=188, Percent_Identity=32.4468085106383, Blast_Score=99, Evalue=5e-21, Organism=Homo sapiens, GI27436984, Length=188, Percent_Identity=31.9148936170213, Blast_Score=99, Evalue=5e-21, Organism=Homo sapiens, GI88758565, Length=196, Percent_Identity=30.1020408163265, Blast_Score=96, Evalue=3e-20, Organism=Homo sapiens, GI45383011, Length=249, Percent_Identity=28.9156626506024, Blast_Score=94, Evalue=9e-20, Organism=Homo sapiens, GI25952092, Length=199, Percent_Identity=31.1557788944724, Blast_Score=94, Evalue=1e-19, Organism=Homo sapiens, GI25952108, Length=179, Percent_Identity=32.4022346368715, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI25952087, Length=200, Percent_Identity=30, Blast_Score=93, Evalue=2e-19, Organism=Homo sapiens, GI27436988, Length=188, Percent_Identity=36.1702127659575, Blast_Score=92, Evalue=5e-19, Organism=Homo sapiens, GI13492973, Length=190, Percent_Identity=34.7368421052632, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI119395748, Length=255, Percent_Identity=26.2745098039216, Blast_Score=89, Evalue=4e-18, Organism=Homo sapiens, GI4826782, Length=195, Percent_Identity=28.7179487179487, Blast_Score=89, Evalue=4e-18, Organism=Homo sapiens, GI7657289, Length=251, Percent_Identity=31.4741035856574, Blast_Score=89, Evalue=5e-18, Organism=Homo sapiens, GI4504817, Length=196, Percent_Identity=28.5714285714286, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI27436996, Length=261, Percent_Identity=26.8199233716475, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI4504821, Length=202, Percent_Identity=29.7029702970297, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI5031819, Length=195, Percent_Identity=30.2564102564103, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI88758576, Length=194, Percent_Identity=29.3814432989691, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI24497462, Length=196, Percent_Identity=29.0816326530612, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI19424136, Length=228, Percent_Identity=31.140350877193, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI24497460, Length=206, Percent_Identity=28.6407766990291, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI4826786, Length=192, Percent_Identity=28.6458333333333, Blast_Score=79, Evalue=3e-15, Organism=Homo sapiens, GI163792201, Length=192, Percent_Identity=28.6458333333333, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI24497458, Length=192, Percent_Identity=28.6458333333333, Blast_Score=78, Evalue=7e-15, Organism=Homo sapiens, GI6912444, Length=233, Percent_Identity=30.9012875536481, Blast_Score=78, Evalue=8e-15, Organism=Homo sapiens, GI21217561, Length=192, Percent_Identity=28.6458333333333, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI21217563, Length=192, Percent_Identity=28.6458333333333, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI26051262, Length=220, Percent_Identity=26.8181818181818, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI26051260, Length=220, Percent_Identity=26.8181818181818, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI26051266, Length=220, Percent_Identity=26.8181818181818, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI26051264, Length=220, Percent_Identity=26.8181818181818, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI27436993, Length=183, Percent_Identity=27.8688524590164, Blast_Score=75, Evalue=9e-14, Organism=Homo sapiens, GI19071574, Length=183, Percent_Identity=27.8688524590164, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI236462079, Length=219, Percent_Identity=25.5707762557078, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI236461942, Length=219, Percent_Identity=25.5707762557078, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI28373065, Length=219, Percent_Identity=25.5707762557078, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI236461719, Length=219, Percent_Identity=25.5707762557078, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI236462242, Length=219, Percent_Identity=25.5707762557078, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI26638655, Length=223, Percent_Identity=29.1479820627803, Blast_Score=72, Evalue=8e-13, Organism=Homo sapiens, GI26638653, Length=223, Percent_Identity=29.1479820627803, Blast_Score=71, Evalue=8e-13, Organism=Homo sapiens, GI4758630, Length=261, Percent_Identity=24.904214559387, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI26051268, Length=264, Percent_Identity=25.7575757575758, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI32479527, Length=226, Percent_Identity=27.8761061946903, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI32479525, Length=220, Percent_Identity=28.1818181818182, Blast_Score=65, Evalue=6e-11, Organism=Caenorhabditis elegans, GI71989381, Length=210, Percent_Identity=34.2857142857143, Blast_Score=115, Evalue=3e-26, Organism=Caenorhabditis elegans, GI71989376, Length=210, Percent_Identity=34.2857142857143, Blast_Score=115, Evalue=4e-26, Organism=Caenorhabditis elegans, GI71989361, Length=210, Percent_Identity=34.2857142857143, Blast_Score=114, Evalue=4e-26, Organism=Caenorhabditis elegans, GI71989369, Length=210, Percent_Identity=34.2857142857143, Blast_Score=114, Evalue=4e-26, Organism=Caenorhabditis elegans, GI71994313, Length=273, Percent_Identity=31.1355311355311, Blast_Score=106, Evalue=1e-23, Organism=Caenorhabditis elegans, GI193206869, Length=213, Percent_Identity=31.4553990610329, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI25148255, Length=190, Percent_Identity=32.6315789473684, Blast_Score=103, Evalue=8e-23, Organism=Caenorhabditis elegans, GI17544122, Length=189, Percent_Identity=33.8624338624339, Blast_Score=100, Evalue=8e-22, Organism=Caenorhabditis elegans, GI71994320, Length=236, Percent_Identity=32.6271186440678, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI71994134, Length=186, Percent_Identity=31.7204301075269, Blast_Score=91, Evalue=6e-19, Organism=Caenorhabditis elegans, GI17569273, Length=183, Percent_Identity=30.0546448087432, Blast_Score=87, Evalue=8e-18, Organism=Caenorhabditis elegans, GI71986574, Length=187, Percent_Identity=29.4117647058824, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI72000220, Length=180, Percent_Identity=30.5555555555556, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI71985535, Length=198, Percent_Identity=31.3131313131313, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI32564076, Length=186, Percent_Identity=27.4193548387097, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI32564084, Length=186, Percent_Identity=27.4193548387097, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI32564088, Length=186, Percent_Identity=27.4193548387097, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI71986008, Length=182, Percent_Identity=34.0659340659341, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI71986011, Length=182, Percent_Identity=34.0659340659341, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI32564086, Length=186, Percent_Identity=27.4193548387097, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI32564090, Length=186, Percent_Identity=27.4193548387097, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI71986003, Length=182, Percent_Identity=34.0659340659341, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI32564082, Length=186, Percent_Identity=27.4193548387097, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI32564080, Length=186, Percent_Identity=27.4193548387097, Blast_Score=78, Evalue=5e-15, Organism=Caenorhabditis elegans, GI193207406, Length=207, Percent_Identity=28.5024154589372, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI115532628, Length=208, Percent_Identity=31.25, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI71998749, Length=208, Percent_Identity=31.25, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI32564074, Length=204, Percent_Identity=31.8627450980392, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI32564068, Length=208, Percent_Identity=31.25, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI32564070, Length=208, Percent_Identity=31.25, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI32564072, Length=204, Percent_Identity=31.8627450980392, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI25147242, Length=221, Percent_Identity=29.4117647058824, Blast_Score=70, Evalue=9e-13, Organism=Caenorhabditis elegans, GI25147238, Length=221, Percent_Identity=29.4117647058824, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI32564066, Length=231, Percent_Identity=26.4069264069264, Blast_Score=64, Evalue=9e-11, Organism=Drosophila melanogaster, GI281365536, Length=244, Percent_Identity=31.5573770491803, Blast_Score=116, Evalue=2e-26, Organism=Drosophila melanogaster, GI116007764, Length=244, Percent_Identity=31.5573770491803, Blast_Score=116, Evalue=2e-26, Organism=Drosophila melanogaster, GI24656289, Length=244, Percent_Identity=31.5573770491803, Blast_Score=116, Evalue=2e-26, Organism=Drosophila melanogaster, GI24656294, Length=244, Percent_Identity=31.5573770491803, Blast_Score=116, Evalue=2e-26, Organism=Drosophila melanogaster, GI17737641, Length=188, Percent_Identity=30.3191489361702, Blast_Score=95, Evalue=6e-20, Organism=Drosophila melanogaster, GI161084970, Length=188, Percent_Identity=30.3191489361702, Blast_Score=95, Evalue=6e-20, Organism=Drosophila melanogaster, GI24642910, Length=203, Percent_Identity=30.0492610837438, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI24642914, Length=203, Percent_Identity=30.0492610837438, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI24642916, Length=203, Percent_Identity=30.0492610837438, Blast_Score=89, Evalue=3e-18, Organism=Drosophila melanogaster, GI45555859, Length=203, Percent_Identity=30.0492610837438, Blast_Score=89, Evalue=3e-18, Organism=Drosophila melanogaster, GI45549143, Length=203, Percent_Identity=30.0492610837438, Blast_Score=89, Evalue=3e-18, Organism=Drosophila melanogaster, GI161076829, Length=180, Percent_Identity=27.2222222222222, Blast_Score=84, Evalue=8e-17, Organism=Drosophila melanogaster, GI17136468, Length=187, Percent_Identity=27.807486631016, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI221330674, Length=187, Percent_Identity=27.807486631016, Blast_Score=81, Evalue=6e-16, Organism=Drosophila melanogaster, GI28574020, Length=187, Percent_Identity=27.807486631016, Blast_Score=81, Evalue=7e-16, Organism=Drosophila melanogaster, GI281363097, Length=225, Percent_Identity=26.2222222222222, Blast_Score=76, Evalue=3e-14, Organism=Drosophila melanogaster, GI221330117, Length=194, Percent_Identity=28.8659793814433, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI221330119, Length=194, Percent_Identity=28.8659793814433, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI281363095, Length=194, Percent_Identity=28.8659793814433, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI62472818, Length=222, Percent_Identity=23.4234234234234, Blast_Score=64, Evalue=8e-11, Organism=Drosophila melanogaster, GI62472824, Length=222, Percent_Identity=23.4234234234234, Blast_Score=64, Evalue=8e-11, Organism=Drosophila melanogaster, GI62472908, Length=222, Percent_Identity=23.4234234234234, Blast_Score=64, Evalue=8e-11, Organism=Drosophila melanogaster, GI281362477, Length=222, Percent_Identity=23.4234234234234, Blast_Score=64, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018490 - InterPro: IPR018488 - InterPro: IPR000595 - InterPro: IPR005821 - InterPro: IPR003091 - InterPro: IPR014710 [H]
Pfam domain/function: PF00027 cNMP_binding; PF00520 Ion_trans [H]
EC number: NA
Molecular weight: Translated: 30250; Mature: 30118
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQNPVKPVHGWRRTLHEIIFEADTPAGRLFDIILIIAILFSVLVVLLDSVTTVRMRYAG CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLFTLEWLFTLLFTVEYILRLLCVLRPAAYARSFFGVVDLLAILPTWATLLLPGTHYLAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH VRLLRVLRIFRVLKLAQYVSEARHLIRALRDSRRKILVFLLAVLSLVTIFGTLMYVIEGE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KYGFTSIPRSMYWAVVTLTTVGYGDISPGTPLGQGIASFIMLLGYGIIAVPTGIVTSALV CCCCHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RPRPVSTQACPACGRDGHDVDAVHCKYCGTAL CCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC >Mature Secondary Structure TQNPVKPVHGWRRTLHEIIFEADTPAGRLFDIILIIAILFSVLVVLLDSVTTVRMRYAG CCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLFTLEWLFTLLFTVEYILRLLCVLRPAAYARSFFGVVDLLAILPTWATLLLPGTHYLAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH VRLLRVLRIFRVLKLAQYVSEARHLIRALRDSRRKILVFLLAVLSLVTIFGTLMYVIEGE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KYGFTSIPRSMYWAVVTLTTVGYGDISPGTPLGQGIASFIMLLGYGIIAVPTGIVTSALV CCCCHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RPRPVSTQACPACGRDGHDVDAVHCKYCGTAL CCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1522059 [H]