| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is baeR [C]
Identifier: 78358046
GI number: 78358046
Start: 2991966
End: 2993321
Strand: Direct
Name: baeR [C]
Synonym: Dde_3006
Alternate gene names: 78358046
Gene position: 2991966-2993321 (Clockwise)
Preceding gene: 78358045
Following gene: 78358047
Centisome position: 80.21
GC content: 53.76
Gene sequence:
>1356_bases ATGTCTCAGCTTGATATGAAAATGAAGCTCAAACAATATGAGCAGACAGTTATAGAATACCTTGGCGCACAGGGGGGTCA TTTCATCGTAGCCAGCGACGATCAGACCTTTGTGGGCATTCTGCGCACGACGCTGCTCAAGCAGCTTGCCATCAGCGGCG ACCCGCTGACATCCGTCACCGACCCCGACTACATCCTGAAAGTCATCCGCGACACTTCACTGCGTCGTAAGCATCTGGTT GTTTTCATAGAGCGCATGATGCAGGGCAAGGACACCAGCATGCTGGTGCGGCAGATGAAGAACACCTTCGCCAACGTCAA AATCATCATTCTTACCGGAGAAACCGAACGGCAGCGCCTTGTGCTGCTGCACGAGATAGGTGCGGACAACTTCATCAGCA AGCCCATATCCATCAACACCCTCATCGAAAAGATAGCCTTCACCATCAAGCCGCAGGGCAAGCTGGGCCAGCTGATAGAT GCCGCCAAGGCGCTGGTGGCTCAGGGCAATTTTGAAACGGCACTGAAAGCCGCGCGTAAAATTCTGGAAGTGAAGCCCAA CAGCGCCGCCGGCTATCTGGTGATGGGTGACGCATGGCAGGGGCTCGGAAAGCTGGATAAAGCCCGTGAAAGTTTTGAAC AGGCCAGCGAACACGCCAACCTGTATATGGAACCGCTGAAAAAACTGGCCGAACTGCACAAACTGACCGGCGACATGAAC GAACGGCTGCGCTATCTGGAACGGCTTGATCAGCTTTCGCCACTTAATGTCGAACGCAAGGTGGACATGGGTGAAATCCA TGTGGAACTTGGCAACGAAGAACGCGCCGAAGAGCTGTTTGAAACCGCCGTACAACAGGCCACCAAAGACGCCCTGAACT ACATTGGTGAAATTTCTGAAAAAATAGCGGCTGTTTACAGTTCAAGAGACCCCCACAAAGCCGAAAAATACTACCGGCAG GCTCTGGATGCCAAGGGCAGTCATCTTGACCACACCGACATAGCCACCTTCAACAGGCTGGGCATTGCCCTGCGCCGTCA GGGCAAATGGCAGCAGGCCATCGAAGAATACGAAAAGGCCCTGCACATCACGCCGGATGACCCCAACCTCATGTACAACA TGTCCATGGCCTATGCCGAGGGGCGGCAATTTGACAAAGCCTGCAGCATCGTGATGCGCATCCGCCAGATTACACCGTCA TTCGGTTCCATGGACAAAACGCTTTCGTACAATATGGGCATAATTTTCTCGCGGGGCAGGCAACCCGCGGATGCCAGGGT ATTGTTCGAAAACGCCCTCCGGCTCGACCCTTCGTTCGAAAAAGCCCAGAAGGCGCTGGAAAATCTGGAAAGCTGA
Upstream 100 bases:
>100_bases TGAATGGTTGACATACTGAAAACAGCCCCCATACTGTACCGGGCGGCATACCCGGGGGAGGGAATGCCCTACCTCACTTC ACACACCGGAGGGCATCCGC
Downstream 100 bases:
>100_bases CCGGCATTGTCTCCCGCGGGACTTTTCCGTATAGTGCCTCACTGCTTATGCGATACGCAGACGACGGCACGCTCCACCTT CAGCGTTCCGTCTTTCAGCC
Product: response regulator receiver domain-containing protein
Products: NA
Alternate protein names: Response Regulator Receiver Protein; Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide Domain-Containing Protein; TPR Domain Containing Protein; Response Regulator Receiver Domain-Containing Protein; Tetratricopeptide TPR_1 Repeat-Containing Protein; Peptidase S1 And S6 Chymotrypsin/Hap
Number of amino acids: Translated: 451; Mature: 450
Protein sequence:
>451_residues MSQLDMKMKLKQYEQTVIEYLGAQGGHFIVASDDQTFVGILRTTLLKQLAISGDPLTSVTDPDYILKVIRDTSLRRKHLV VFIERMMQGKDTSMLVRQMKNTFANVKIIILTGETERQRLVLLHEIGADNFISKPISINTLIEKIAFTIKPQGKLGQLID AAKALVAQGNFETALKAARKILEVKPNSAAGYLVMGDAWQGLGKLDKARESFEQASEHANLYMEPLKKLAELHKLTGDMN ERLRYLERLDQLSPLNVERKVDMGEIHVELGNEERAEELFETAVQQATKDALNYIGEISEKIAAVYSSRDPHKAEKYYRQ ALDAKGSHLDHTDIATFNRLGIALRRQGKWQQAIEEYEKALHITPDDPNLMYNMSMAYAEGRQFDKACSIVMRIRQITPS FGSMDKTLSYNMGIIFSRGRQPADARVLFENALRLDPSFEKAQKALENLES
Sequences:
>Translated_451_residues MSQLDMKMKLKQYEQTVIEYLGAQGGHFIVASDDQTFVGILRTTLLKQLAISGDPLTSVTDPDYILKVIRDTSLRRKHLV VFIERMMQGKDTSMLVRQMKNTFANVKIIILTGETERQRLVLLHEIGADNFISKPISINTLIEKIAFTIKPQGKLGQLID AAKALVAQGNFETALKAARKILEVKPNSAAGYLVMGDAWQGLGKLDKARESFEQASEHANLYMEPLKKLAELHKLTGDMN ERLRYLERLDQLSPLNVERKVDMGEIHVELGNEERAEELFETAVQQATKDALNYIGEISEKIAAVYSSRDPHKAEKYYRQ ALDAKGSHLDHTDIATFNRLGIALRRQGKWQQAIEEYEKALHITPDDPNLMYNMSMAYAEGRQFDKACSIVMRIRQITPS FGSMDKTLSYNMGIIFSRGRQPADARVLFENALRLDPSFEKAQKALENLES >Mature_450_residues SQLDMKMKLKQYEQTVIEYLGAQGGHFIVASDDQTFVGILRTTLLKQLAISGDPLTSVTDPDYILKVIRDTSLRRKHLVV FIERMMQGKDTSMLVRQMKNTFANVKIIILTGETERQRLVLLHEIGADNFISKPISINTLIEKIAFTIKPQGKLGQLIDA AKALVAQGNFETALKAARKILEVKPNSAAGYLVMGDAWQGLGKLDKARESFEQASEHANLYMEPLKKLAELHKLTGDMNE RLRYLERLDQLSPLNVERKVDMGEIHVELGNEERAEELFETAVQQATKDALNYIGEISEKIAAVYSSRDPHKAEKYYRQA LDAKGSHLDHTDIATFNRLGIALRRQGKWQQAIEEYEKALHITPDDPNLMYNMSMAYAEGRQFDKACSIVMRIRQITPSF GSMDKTLSYNMGIIFSRGRQPADARVLFENALRLDPSFEKAQKALENLES
Specific function: Member Of The Two-Component Regulatory System Baes/Baer. [C]
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Caenorhabditis elegans, GI115532692, Length=309, Percent_Identity=22.6537216828479, Blast_Score=70, Evalue=3e-12, Organism=Caenorhabditis elegans, GI115532690, Length=309, Percent_Identity=22.9773462783171, Blast_Score=69, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51054; Mature: 50922
Theoretical pI: Translated: 7.84; Mature: 7.84
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50005 TPR L=RR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQLDMKMKLKQYEQTVIEYLGAQGGHFIVASDDQTFVGILRTTLLKQLAISGDPLTSVT CCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCC DPDYILKVIRDTSLRRKHLVVFIERMMQGKDTSMLVRQMKNTFANVKIIILTGETERQRL CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEEEECCCCCHHE VLLHEIGADNFISKPISINTLIEKIAFTIKPQGKLGQLIDAAKALVAQGNFETALKAARK EHHHHCCCCCHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH ILEVKPNSAAGYLVMGDAWQGLGKLDKARESFEQASEHANLYMEPLKKLAELHKLTGDMN HHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH ERLRYLERLDQLSPLNVERKVDMGEIHVELGNEERAEELFETAVQQATKDALNYIGEISE HHHHHHHHHHCCCCCCCHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH KIAAVYSSRDPHKAEKYYRQALDAKGSHLDHTDIATFNRLGIALRRQGKWQQAIEEYEKA HHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHC LHITPDDPNLMYNMSMAYAEGRQFDKACSIVMRIRQITPSFGSMDKTLSYNMGIIFSRGR EECCCCCCCEEEEEHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCEEEECCC QPADARVLFENALRLDPSFEKAQKALENLES CCCHHHHHHHHHHCCCCCHHHHHHHHHHCCC >Mature Secondary Structure SQLDMKMKLKQYEQTVIEYLGAQGGHFIVASDDQTFVGILRTTLLKQLAISGDPLTSVT CCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCC DPDYILKVIRDTSLRRKHLVVFIERMMQGKDTSMLVRQMKNTFANVKIIILTGETERQRL CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEEEECCCCCHHE VLLHEIGADNFISKPISINTLIEKIAFTIKPQGKLGQLIDAAKALVAQGNFETALKAARK EHHHHCCCCCHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH ILEVKPNSAAGYLVMGDAWQGLGKLDKARESFEQASEHANLYMEPLKKLAELHKLTGDMN HHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH ERLRYLERLDQLSPLNVERKVDMGEIHVELGNEERAEELFETAVQQATKDALNYIGEISE HHHHHHHHHHCCCCCCCHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH KIAAVYSSRDPHKAEKYYRQALDAKGSHLDHTDIATFNRLGIALRRQGKWQQAIEEYEKA HHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHC LHITPDDPNLMYNMSMAYAEGRQFDKACSIVMRIRQITPSFGSMDKTLSYNMGIIFSRGR EECCCCCCCEEEEEHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCEEEECCC QPADARVLFENALRLDPSFEKAQKALENLES CCCHHHHHHHHHHCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA