| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78357778
Identifier: 78357778
GI number: 78357778
Start: 2740683
End: 2741483
Strand: Direct
Name: 78357778
Synonym: Dde_2736
Alternate gene names: NA
Gene position: 2740683-2741483 (Clockwise)
Preceding gene: 78357777
Following gene: 78357783
Centisome position: 73.47
GC content: 58.8
Gene sequence:
>801_bases ATGCTGCTTGATATACATACCCACGCGTTTCATCCCAAAATAGCCTCCAAAGCCGTGGCCCAGCTGGAAAGCCACTACGG CATCACCATGAGCGGCTCCGGCCTGCTGGAAGATCTTGATGCGGTAACCCGCAAAGCCGGACTGGACGGCTATGTGGTGC ACAACGCGGCCACCGCTGCGGCACAGGTTGTGCCTGCCAACAACTTTGCCATGGCGCTCAGCCTCACCTGCCCCCGTGCC GTGGCATTCGGCAGCATCCATCCCGATTATGAAGAATGGGAGGCACAGCTGAAGCGTCTGCAGGCGCACGGCATACGCGG CATCAAGCTGCACCCCGAGTTTCAGGGGTTCTGGCTGGATGACCCGCGGCTGGAACCTATTTTTGAAACCATCGGCGACA GCATGATGATCATGTGTCACATCGGCGACGCACTGCCGCCCGATGAAAACCCTTCATGCCCGTACAAGCTGGCGGCACTG ATTAAAAAATTTCCCCGCGTGCGGTTCATCGCCGCACACATGGGCGGCTACCGCCACTGGAAGTATGCGCTGGAAGCACT GGCGGGCAAAAACGTCTACATGGATACTTCCAGCTCACTGGCGTTCATCGACGATGACACCCTGCACGGTCTATGGAAAA AGCACCCGCGTGAACAATGGCTTTTCGGCAGTGACTGGCCGCTGTTTGATCCTGCATCGGAACAGAAAATGCTCCGGAAA CGGCTGGGCATCAGCGACAGCGCTCTGGCCGATCTCATGGGCAACGGTGCGCTGGCACTGGGGCTCAGGGCGCAGGACTG A
Upstream 100 bases:
>100_bases GAATGGCTCCACGCCCTGTTCACCGCGTAACCCCGCCGCTACGCCAAACCGCCCGCGCCCCGCTGTTTACCGCGGAGGCA GCGGCCACACTCTTACTGTC
Downstream 100 bases:
>100_bases AACACTGCGTTCCGCATGGGAACCTTGCACAAAAAAACACCGCATCCTTAATGAATGCGGTGTTTTTTTGTGTCTGACAT ACAGGCATGCACATACCGGC
Product: amidohydrolase family protein
Products: NA
Alternate protein names: Amidohydrolase; Metal-Dependent Hydrolase Of TIM-Barrel Fold; TIM-Barrel Fold Metal-Dependent Hydrolase; Amidohydrolase 2 Family Protein
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MLLDIHTHAFHPKIASKAVAQLESHYGITMSGSGLLEDLDAVTRKAGLDGYVVHNAATAAAQVVPANNFAMALSLTCPRA VAFGSIHPDYEEWEAQLKRLQAHGIRGIKLHPEFQGFWLDDPRLEPIFETIGDSMMIMCHIGDALPPDENPSCPYKLAAL IKKFPRVRFIAAHMGGYRHWKYALEALAGKNVYMDTSSSLAFIDDDTLHGLWKKHPREQWLFGSDWPLFDPASEQKMLRK RLGISDSALADLMGNGALALGLRAQD
Sequences:
>Translated_266_residues MLLDIHTHAFHPKIASKAVAQLESHYGITMSGSGLLEDLDAVTRKAGLDGYVVHNAATAAAQVVPANNFAMALSLTCPRA VAFGSIHPDYEEWEAQLKRLQAHGIRGIKLHPEFQGFWLDDPRLEPIFETIGDSMMIMCHIGDALPPDENPSCPYKLAAL IKKFPRVRFIAAHMGGYRHWKYALEALAGKNVYMDTSSSLAFIDDDTLHGLWKKHPREQWLFGSDWPLFDPASEQKMLRK RLGISDSALADLMGNGALALGLRAQD >Mature_266_residues MLLDIHTHAFHPKIASKAVAQLESHYGITMSGSGLLEDLDAVTRKAGLDGYVVHNAATAAAQVVPANNFAMALSLTCPRA VAFGSIHPDYEEWEAQLKRLQAHGIRGIKLHPEFQGFWLDDPRLEPIFETIGDSMMIMCHIGDALPPDENPSCPYKLAAL IKKFPRVRFIAAHMGGYRHWKYALEALAGKNVYMDTSSSLAFIDDDTLHGLWKKHPREQWLFGSDWPLFDPASEQKMLRK RLGISDSALADLMGNGALALGLRAQD
Specific function: Unknown
COG id: COG2159
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29458; Mature: 29458
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLDIHTHAFHPKIASKAVAQLESHYGITMSGSGLLEDLDAVTRKAGLDGYVVHNAATAA CEEEECCCCCCCHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHCCCCCEEEECHHHHH AQVVPANNFAMALSLTCPRAVAFGSIHPDYEEWEAQLKRLQAHGIRGIKLHPEFQGFWLD HEEECCCCEEEEEEECCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCEECC DPRLEPIFETIGDSMMIMCHIGDALPPDENPSCPYKLAALIKKFPRVRFIAAHMGGYRHW CCCCCHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEHHHHCCHHHH KYALEALAGKNVYMDTSSSLAFIDDDTLHGLWKKHPREQWLFGSDWPLFDPASEQKMLRK HHHHHHHCCCCEEEECCCCEEEECCCHHHHHHHHCCHHHCCCCCCCCCCCCCHHHHHHHH RLGISDSALADLMGNGALALGLRAQD HCCCCHHHHHHHHCCCEEEEEEECCC >Mature Secondary Structure MLLDIHTHAFHPKIASKAVAQLESHYGITMSGSGLLEDLDAVTRKAGLDGYVVHNAATAA CEEEECCCCCCCHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHCCCCCEEEECHHHHH AQVVPANNFAMALSLTCPRAVAFGSIHPDYEEWEAQLKRLQAHGIRGIKLHPEFQGFWLD HEEECCCCEEEEEEECCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCEECC DPRLEPIFETIGDSMMIMCHIGDALPPDENPSCPYKLAALIKKFPRVRFIAAHMGGYRHW CCCCCHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEHHHHCCHHHH KYALEALAGKNVYMDTSSSLAFIDDDTLHGLWKKHPREQWLFGSDWPLFDPASEQKMLRK HHHHHHHCCCCEEEECCCCEEEECCCHHHHHHHHCCHHHCCCCCCCCCCCCCHHHHHHHH RLGISDSALADLMGNGALALGLRAQD HCCCCHHHHHHHHCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA