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The map label for this gene is ybgC [C]

Identifier: 78357777

GI number: 78357777

Start: 2740199

End: 2740612

Strand: Direct

Name: ybgC [C]

Synonym: Dde_2735

Alternate gene names: 78357777

Gene position: 2740199-2740612 (Clockwise)

Preceding gene: 78357776

Following gene: 78357778

Centisome position: 73.46

GC content: 60.63

Gene sequence:

>414_bases
ATGACCGACTTTCCCGCGCCGGAAACCTGGCTCGCACACCGCGTATCCTATGGTGAGACGGACACCATGGGCGTTGTATA
CTATGCCGAGTACCTGCACTTTTTCGAACGGGCCCGCAGCGAGTTCATCCGCGCCCGCGGCATGAGCTATGCGCAGGTGG
AAGAAAAAGACATCATGCTGCCCGTGCGCGAAGCGGCCTGCCGCTACCGCCGTCCCGCCCGCTTTGATGATCTGGTGCGC
ATCCGCACCGGTATCTCGCAATGGGGCAGGGCATCACTGACGTTTGTGTATGAAATCTGGAACGAGGATAAAACCGTTCT
GCTGTGCACGGGCAGCACGCAGCACGCCTGTGTAAACCGCACCGGGCGACCCGTTTCCGTTCCCGAATGGCTCCACGCCC
TGTTCACCGCGTAA

Upstream 100 bases:

>100_bases
AAAAGACAGCTCTTTTCATACTTTGCCACATGCGGCGGCTTGGGGTATGTAACCACTTTGCCCGACGCATCCCATGAGGG
ACGCATTCAGGAGTATGCCC

Downstream 100 bases:

>100_bases
CCCCGCCGCTACGCCAAACCGCCCGCGCCCCGCTGTTTACCGCGGAGGCAGCGGCCACACTCTTACTGTCATGCTGCTTG
ATATACATACCCACGCGTTT

Product: 4-hydroxybenzoyl-CoA thioesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MTDFPAPETWLAHRVSYGETDTMGVVYYAEYLHFFERARSEFIRARGMSYAQVEEKDIMLPVREAACRYRRPARFDDLVR
IRTGISQWGRASLTFVYEIWNEDKTVLLCTGSTQHACVNRTGRPVSVPEWLHALFTA

Sequences:

>Translated_137_residues
MTDFPAPETWLAHRVSYGETDTMGVVYYAEYLHFFERARSEFIRARGMSYAQVEEKDIMLPVREAACRYRRPARFDDLVR
IRTGISQWGRASLTFVYEIWNEDKTVLLCTGSTQHACVNRTGRPVSVPEWLHALFTA
>Mature_136_residues
TDFPAPETWLAHRVSYGETDTMGVVYYAEYLHFFERARSEFIRARGMSYAQVEEKDIMLPVREAACRYRRPARFDDLVRI
RTGISQWGRASLTFVYEIWNEDKTVLLCTGSTQHACVNRTGRPVSVPEWLHALFTA

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 4-hydroxybenzoyl-CoA thioesterase family [H]

Homologues:

Organism=Escherichia coli, GI1786957, Length=123, Percent_Identity=35.7723577235772, Blast_Score=73, Evalue=7e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006684
- InterPro:   IPR008272
- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 15943; Mature: 15812

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDFPAPETWLAHRVSYGETDTMGVVYYAEYLHFFERARSEFIRARGMSYAQVEEKDIML
CCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCC
PVREAACRYRRPARFDDLVRIRTGISQWGRASLTFVYEIWNEDKTVLLCTGSTQHACVNR
CHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHEEEEEEEECCCCEEEEEECCCCCHHHCC
TGRPVSVPEWLHALFTA
CCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
TDFPAPETWLAHRVSYGETDTMGVVYYAEYLHFFERARSEFIRARGMSYAQVEEKDIML
CCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCC
PVREAACRYRRPARFDDLVRIRTGISQWGRASLTFVYEIWNEDKTVLLCTGSTQHACVNR
CHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHEEEEEEEECCCCEEEEEECCCCCHHHCC
TGRPVSVPEWLHALFTA
CCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]