| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is fusA
Identifier: 78357783
GI number: 78357783
Start: 2743327
End: 2745387
Strand: Direct
Name: fusA
Synonym: Dde_2741
Alternate gene names: 78357783
Gene position: 2743327-2745387 (Clockwise)
Preceding gene: 78357778
Following gene: 78357784
Centisome position: 73.54
GC content: 57.54
Gene sequence:
>2061_bases ATGTCCAGAGCGCTTGAAAATCAAAGAACCTATGCCCTGGTCGGCACCGGAGGCAGCGGCAAGACCTCGCTGGCGGAAAT GCTTCTTTTCCAGTCCGGCGCGGTCAGCCGCATGGGAAAAATCGAGGACGGAACAAGCTGCCTTGATTACGAGCCGGAGG AAGTGAAGCGGCGCGGCAGCATACAGCCCGCTTTTGCGACATTTTCATGGAACAAGAACCGGCACTTTCTTGCTGACATC CCCGGCGATAACAACTTTATCGGCGACATCAACTACCTGCTGGCCGGCGTTGATGCCGCCGTTTTTGTTGTCGATGCCGT GGACGGAGTACGCCCCCTGACACGTAAACTGTGGAACGCCGTGAAAAATGCCGGTCTGCCCGCCATGGTCTTCATCAACA AGACCGACCGCGACAGAGCCGACTTCGACATGGCCTTTGCGGGATTGTCCGACATACTGGGTATCAAACCCGTTCTGCTC TATTCTCCCGTGGGGCAGCAGGAAAACTTTCGCGGGGTGGCCGATGTGCTGGCAGGCAAGGCCCTGCTGTTCGGCGAAAA CGGCAGCGTGACCGAAGCTGACATACCCGCGGACATGGCAGACGACATACAGGCCCTGCGCGAAACCATGGTGGAAAACA TCGCGGAAAGCGATGAAGAGCTTATGGAAAAATACCTTGAAGAAGGTGAACTGACAGACGAAGAAATACACGCTGCCCTG CGCAAAGGCGTACTGAAAGGCGAACTGATACCGGTTGCTGCCGGTTCGGCACTGGAAAACAAAGGCGGCGCGCAGGTGCT CGACCTCATCCAGAGTCTTTTCCCCTCGCCGCTGGACCGCGCGGCATGGCTTGACGAAGAAGGCAACGAGCGCGTCTCCT CTCCCGACGGGCCGGTGTCTGCATTTGTCATAAAAACGCTGGCCGACCCCTTTGCAGGGCAGCTCAGTATTCTGCGTATT CTTTCCGGCACGCTGAAGCCCGACACCACGCTGTACAACCCCGCCAGAGAAGAAAACGAGCGTGTGGGCACACCGCTGTG CCTGGTGGGCAAAGAGCAGACCCCCTGCAAGGAAGCTCTTGAACCCGGTGCCGTTATTGCCGTGGCCAAACTGAAAAACA CCCGTACCGGCGACACACTGTGCGAAGAAAAAACACCCTTTGCGCTGGCGCGCCCGCATATGCCCCCCACTCTTATCACC TATGCGCTGGCCCCGCAGGAAAAAGGCGATGAAGACAAAGTATACGCGGCCGTGCACAAACTGCTTGATGAAGACATAAC CCTGCGTCTGAACAGAGACGAAGAAACCGGAGACATACTGCTTTCCGGCATGGGGCAGATGCACATAGAAACCGCCGTGG AACGTGCGCGCCGCCGTTACAAGGCGGACATTGTGCTGAAAACGCCCAAGGTGCCCTACCGCGAAACCATCAAGGGCAAA GCGCAGGTGCAGGGCAGACACAAGAAACAATCCGGCGGACGCGGGCAGTTCGGCGACTGCTGGGTGGAAATCAGCCCGCA GGAGCGCGGAGCAGGGTACACCTTTGAAGACGCCATCGTGGGCGGTTCCATTCCCCGCCAGTATATACCCGCTGTGGATA AAGGCGTTCAGGAGGCCGCCCACAGAGGCTATCTTGCCGGATATCCCATGGTGGACTTCAAGGTGCGTCTGTACGACGGG TCGTACCACACGGTGGACTCTTCGGAAATGGCCTTTAAAATCGCAGGATCGCTTGCCTTTAAAAAAGCCATGGAATCATG CCGCCCCGTACTGCTTGAACCCGTCATGCTGGTCAGCGTGTCTGTGCCGGATGAATACATGGGGGACATCATCGGCGACC TTTCGAGCCGCCGCGGCAAAGTGCTTGGCTCCGACTCCACAGCCGGCATAACAGAAATCAAAGCGCACATCCCCATGAAT GAAATCATGCGCTATGCCCCCGATCTGCGTTCCATGACCGGCGGACAGGGCGTGTTCACCATGGAATTCGATCATTACGA AGAAGCTCCGCCCCATATCACCGAAAAGGTGGTGGCAGAAAGCCAGCAGGCAGCAGCCTGA
Upstream 100 bases:
>100_bases TAGACTCGCAGCACCGGAAAAGGGCTGCACTGAGCAAAAGGACAAAACCCCTGCGCGCAGGGGCTATTCCCACGATACAC ACGTTACAAGGGAGAGCTAC
Downstream 100 bases:
>100_bases TCTGCATTGCCTCAACGACATCCACGCGGCCGCCTCCGGGCGGCCGCATGCATTGTATCGGGGTGTGATATCCCCTGCCG CGACAGCCCCCGTGCAGCAC
Product: elongation factor G
Products: GDP; phosphate
Alternate protein names: EF-G [H]
Number of amino acids: Translated: 686; Mature: 685
Protein sequence:
>686_residues MSRALENQRTYALVGTGGSGKTSLAEMLLFQSGAVSRMGKIEDGTSCLDYEPEEVKRRGSIQPAFATFSWNKNRHFLADI PGDNNFIGDINYLLAGVDAAVFVVDAVDGVRPLTRKLWNAVKNAGLPAMVFINKTDRDRADFDMAFAGLSDILGIKPVLL YSPVGQQENFRGVADVLAGKALLFGENGSVTEADIPADMADDIQALRETMVENIAESDEELMEKYLEEGELTDEEIHAAL RKGVLKGELIPVAAGSALENKGGAQVLDLIQSLFPSPLDRAAWLDEEGNERVSSPDGPVSAFVIKTLADPFAGQLSILRI LSGTLKPDTTLYNPAREENERVGTPLCLVGKEQTPCKEALEPGAVIAVAKLKNTRTGDTLCEEKTPFALARPHMPPTLIT YALAPQEKGDEDKVYAAVHKLLDEDITLRLNRDEETGDILLSGMGQMHIETAVERARRRYKADIVLKTPKVPYRETIKGK AQVQGRHKKQSGGRGQFGDCWVEISPQERGAGYTFEDAIVGGSIPRQYIPAVDKGVQEAAHRGYLAGYPMVDFKVRLYDG SYHTVDSSEMAFKIAGSLAFKKAMESCRPVLLEPVMLVSVSVPDEYMGDIIGDLSSRRGKVLGSDSTAGITEIKAHIPMN EIMRYAPDLRSMTGGQGVFTMEFDHYEEAPPHITEKVVAESQQAAA
Sequences:
>Translated_686_residues MSRALENQRTYALVGTGGSGKTSLAEMLLFQSGAVSRMGKIEDGTSCLDYEPEEVKRRGSIQPAFATFSWNKNRHFLADI PGDNNFIGDINYLLAGVDAAVFVVDAVDGVRPLTRKLWNAVKNAGLPAMVFINKTDRDRADFDMAFAGLSDILGIKPVLL YSPVGQQENFRGVADVLAGKALLFGENGSVTEADIPADMADDIQALRETMVENIAESDEELMEKYLEEGELTDEEIHAAL RKGVLKGELIPVAAGSALENKGGAQVLDLIQSLFPSPLDRAAWLDEEGNERVSSPDGPVSAFVIKTLADPFAGQLSILRI LSGTLKPDTTLYNPAREENERVGTPLCLVGKEQTPCKEALEPGAVIAVAKLKNTRTGDTLCEEKTPFALARPHMPPTLIT YALAPQEKGDEDKVYAAVHKLLDEDITLRLNRDEETGDILLSGMGQMHIETAVERARRRYKADIVLKTPKVPYRETIKGK AQVQGRHKKQSGGRGQFGDCWVEISPQERGAGYTFEDAIVGGSIPRQYIPAVDKGVQEAAHRGYLAGYPMVDFKVRLYDG SYHTVDSSEMAFKIAGSLAFKKAMESCRPVLLEPVMLVSVSVPDEYMGDIIGDLSSRRGKVLGSDSTAGITEIKAHIPMN EIMRYAPDLRSMTGGQGVFTMEFDHYEEAPPHITEKVVAESQQAAA >Mature_685_residues SRALENQRTYALVGTGGSGKTSLAEMLLFQSGAVSRMGKIEDGTSCLDYEPEEVKRRGSIQPAFATFSWNKNRHFLADIP GDNNFIGDINYLLAGVDAAVFVVDAVDGVRPLTRKLWNAVKNAGLPAMVFINKTDRDRADFDMAFAGLSDILGIKPVLLY SPVGQQENFRGVADVLAGKALLFGENGSVTEADIPADMADDIQALRETMVENIAESDEELMEKYLEEGELTDEEIHAALR KGVLKGELIPVAAGSALENKGGAQVLDLIQSLFPSPLDRAAWLDEEGNERVSSPDGPVSAFVIKTLADPFAGQLSILRIL SGTLKPDTTLYNPAREENERVGTPLCLVGKEQTPCKEALEPGAVIAVAKLKNTRTGDTLCEEKTPFALARPHMPPTLITY ALAPQEKGDEDKVYAAVHKLLDEDITLRLNRDEETGDILLSGMGQMHIETAVERARRRYKADIVLKTPKVPYRETIKGKA QVQGRHKKQSGGRGQFGDCWVEISPQERGAGYTFEDAIVGGSIPRQYIPAVDKGVQEAAHRGYLAGYPMVDFKVRLYDGS YHTVDSSEMAFKIAGSLAFKKAMESCRPVLLEPVMLVSVSVPDEYMGDIIGDLSSRRGKVLGSDSTAGITEIKAHIPMNE IMRYAPDLRSMTGGQGVFTMEFDHYEEAPPHITEKVVAESQQAAA
Specific function: Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and
COG id: COG0480
COG function: function code J; Translation elongation factors (GTPases)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EF-G/EF-2 subfamily [H]
Homologues:
Organism=Homo sapiens, GI18390331, Length=686, Percent_Identity=30.9037900874636, Blast_Score=330, Evalue=3e-90, Organism=Homo sapiens, GI19923640, Length=707, Percent_Identity=27.5813295615276, Blast_Score=256, Evalue=4e-68, Organism=Homo sapiens, GI25306287, Length=707, Percent_Identity=26.3083451202263, Blast_Score=225, Evalue=9e-59, Organism=Homo sapiens, GI25306283, Length=386, Percent_Identity=30.8290155440415, Blast_Score=162, Evalue=1e-39, Organism=Homo sapiens, GI4503483, Length=479, Percent_Identity=21.7118997912317, Blast_Score=74, Evalue=4e-13, Organism=Escherichia coli, GI1789738, Length=680, Percent_Identity=39.5588235294118, Blast_Score=483, Evalue=1e-137, Organism=Escherichia coli, GI1790835, Length=473, Percent_Identity=22.8329809725159, Blast_Score=108, Evalue=1e-24, Organism=Escherichia coli, GI48994988, Length=218, Percent_Identity=29.3577981651376, Blast_Score=72, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17533571, Length=700, Percent_Identity=29.8571428571429, Blast_Score=323, Evalue=2e-88, Organism=Caenorhabditis elegans, GI17556745, Length=710, Percent_Identity=23.6619718309859, Blast_Score=179, Evalue=5e-45, Organism=Caenorhabditis elegans, GI17506493, Length=144, Percent_Identity=31.9444444444444, Blast_Score=71, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6323098, Length=685, Percent_Identity=31.8248175182482, Blast_Score=338, Evalue=2e-93, Organism=Saccharomyces cerevisiae, GI6322359, Length=780, Percent_Identity=24.4871794871795, Blast_Score=221, Evalue=2e-58, Organism=Drosophila melanogaster, GI24582462, Length=699, Percent_Identity=31.0443490701001, Blast_Score=354, Evalue=9e-98, Organism=Drosophila melanogaster, GI221458488, Length=703, Percent_Identity=26.3157894736842, Blast_Score=212, Evalue=7e-55, Organism=Drosophila melanogaster, GI24585711, Length=144, Percent_Identity=31.25, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI24585713, Length=144, Percent_Identity=31.25, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI24585709, Length=144, Percent_Identity=31.25, Blast_Score=70, Evalue=4e-12,
Paralogues:
None
Copy number: 1080 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 7984 Molecules/Cell In: Growth Phase, Gl
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR000795 - InterPro: IPR020568 - InterPro: IPR014721 - InterPro: IPR005225 - InterPro: IPR004540 - InterPro: IPR000640 - InterPro: IPR005517 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF00679 EFG_C; PF03764 EFG_IV; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: 3.6.5.3
Molecular weight: Translated: 74755; Mature: 74624
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRALENQRTYALVGTGGSGKTSLAEMLLFQSGAVSRMGKIEDGTSCLDYEPEEVKRRGS CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCHHHHHHCCC IQPAFATFSWNKNRHFLADIPGDNNFIGDINYLLAGVDAAVFVVDAVDGVRPLTRKLWNA CCCEEEEEEECCCCEEEEECCCCCCEECHHHHHHHHCCCEEEEEHHHCCCHHHHHHHHHH VKNAGLPAMVFINKTDRDRADFDMAFAGLSDILGIKPVLLYSPVGQQENFRGVADVLAGK HHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHCCC ALLFGENGSVTEADIPADMADDIQALRETMVENIAESDEELMEKYLEEGELTDEEIHAAL EEEECCCCCEECCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHH RKGVLKGELIPVAAGSALENKGGAQVLDLIQSLFPSPLDRAAWLDEEGNERVSSPDGPVS HCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCHH AFVIKTLADPFAGQLSILRILSGTLKPDTTLYNPAREENERVGTPLCLVGKEQTPCKEAL HHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCEEEECCCCCCHHHHC EPGAVIAVAKLKNTRTGDTLCEEKTPFALARPHMPPTLITYALAPQEKGDEDKVYAAVHK CCCCEEEEEECCCCCCCCHHHCCCCCCEEECCCCCHHHEEEEECCCCCCCHHHHHHHHHH LLDEDITLRLNRDEETGDILLSGMGQMHIETAVERARRRYKADIVLKTPKVPYRETIKGK HHCCCEEEEECCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHCCCC AQVQGRHKKQSGGRGQFGDCWVEISPQERGAGYTFEDAIVGGSIPRQYIPAVDKGVQEAA HHHCCCHHCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHH HRGYLAGYPMVDFKVRLYDGSYHTVDSSEMAFKIAGSLAFKKAMESCRPVLLEPVMLVSV HCCCCCCCCEEEEEEEEECCCEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHCCEEEEEE SVPDEYMGDIIGDLSSRRGKVLGSDSTAGITEIKAHIPMNEIMRYAPDLRSMTGGQGVFT ECCHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHCCCHHHHHHHCCCHHHCCCCCEEEE MEFDHYEEAPPHITEKVVAESQQAAA EECCCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure SRALENQRTYALVGTGGSGKTSLAEMLLFQSGAVSRMGKIEDGTSCLDYEPEEVKRRGS CCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCHHHHHHCCC IQPAFATFSWNKNRHFLADIPGDNNFIGDINYLLAGVDAAVFVVDAVDGVRPLTRKLWNA CCCEEEEEEECCCCEEEEECCCCCCEECHHHHHHHHCCCEEEEEHHHCCCHHHHHHHHHH VKNAGLPAMVFINKTDRDRADFDMAFAGLSDILGIKPVLLYSPVGQQENFRGVADVLAGK HHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHCCC ALLFGENGSVTEADIPADMADDIQALRETMVENIAESDEELMEKYLEEGELTDEEIHAAL EEEECCCCCEECCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHH RKGVLKGELIPVAAGSALENKGGAQVLDLIQSLFPSPLDRAAWLDEEGNERVSSPDGPVS HCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCHH AFVIKTLADPFAGQLSILRILSGTLKPDTTLYNPAREENERVGTPLCLVGKEQTPCKEAL HHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCEEEECCCCCCHHHHC EPGAVIAVAKLKNTRTGDTLCEEKTPFALARPHMPPTLITYALAPQEKGDEDKVYAAVHK CCCCEEEEEECCCCCCCCHHHCCCCCCEEECCCCCHHHEEEEECCCCCCCHHHHHHHHHH LLDEDITLRLNRDEETGDILLSGMGQMHIETAVERARRRYKADIVLKTPKVPYRETIKGK HHCCCEEEEECCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHCCCC AQVQGRHKKQSGGRGQFGDCWVEISPQERGAGYTFEDAIVGGSIPRQYIPAVDKGVQEAA HHHCCCHHCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHH HRGYLAGYPMVDFKVRLYDGSYHTVDSSEMAFKIAGSLAFKKAMESCRPVLLEPVMLVSV HCCCCCCCCEEEEEEEEECCCEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHCCEEEEEE SVPDEYMGDIIGDLSSRRGKVLGSDSTAGITEIKAHIPMNEIMRYAPDLRSMTGGQGVFT ECCHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHCCCHHHHHHHCCCHHHCCCCCEEEE MEFDHYEEAPPHITEKVVAESQQAAA EECCCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GTP; H2O
Specific reaction: GTP + H2O = GDP + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA