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The map label for this gene is dcrA [H]

Identifier: 78357454

GI number: 78357454

Start: 2430099

End: 2432522

Strand: Direct

Name: dcrA [H]

Synonym: Dde_2411

Alternate gene names: 78357454

Gene position: 2430099-2432522 (Clockwise)

Preceding gene: 78357452

Following gene: 78357457

Centisome position: 65.15

GC content: 57.14

Gene sequence:

>2424_bases
ATGTTTGATAAAGTGACACTCTCGACAAAATTCTACTCCGGCAGCATCGGGGTTCTGGTGCTGGCCATTACACTGCTGTG
CAGTGTGACCATGTGGCTTGTGAGTGACGGCATGACGCAACTGGGCACAGCCACACTGCAGTCGACCACTGAAAATCTGG
TTACCACCATAGAAATGCAGGACGCCATCACACAGGAAAAGGTAAGCTCCGACCTCAGTGTGCTTGAACGCGAAATGCAG
GGCTACGGTTCGCTGATGCTGAGCGATCTGCATGCGCACCAGACCCGTATGGTCAATCAGGTCACCAAGGAAGCCGCCAC
CGCAACCATACCCGCACTGGTGCTTACCTCAGACGAAGGTATGACCCCGTTGTATGAAAACTTTGAAATAGTGGACAGAG
TGCAGAAGCTCATCGGCGGCACGGCCACTATTTTTCAGGTGCTGCCCGGCAAACTGCTGCGCATATCGACCAACGTGCTC
AAACTGGACGGACAACGGGCCACCGGAACATACATACCGGAATCAAGTCCTGTATATAAAACAGTCATGCGCGGTGAAAC
CTACAGGGGCAAAGCCTTTGTCGTCAACGCATGGTATATCACTGCGTACAAGCCTCTGCGCGATCTGGGCGGCAATATAG
TGGCTGTGGCCTATGTGGGCCGTAAAATAATGACTCCCGCCCTTACCGAAGCCCTCGCCAGCATCAGCGTGGGGGGCCTC
GGTTTTGCCTTTGCCTACAACGACAAGGGCGAAATGATATACCACCCCGAGCATCAGGGCAAAACACTTTCAGACATCGG
CGTGGAACAATACTTTGCCGGTGTGCAGAACGGACTGGTGACCTATATGCGCGACGGGGCGGAACAGATAGCCTATGTCA
GACATTTTGAACCATGGGGCTGGCACATCGGCGTGCAGATGAGCCGCAAAGAAGCACTGCGCGGCATGGACACCATGGTG
CTTACCGGCTCGCTGGGGGTGGCAGCTCTGGCACTGGTGGCAGGCTGTATCTCCACATGGCTGCTGCTGCGCAGTATCAC
CGGTTCGCTGAACAAGCTGGAAGGCTTTACCGCGGCAGTGGCAACGGGCGACTACAACGCCTCGGTGGACTACAAGGCCG
ACGATGCCATAGGCAAAACCATTGCAGCCGTCCGGCGCATGGTGGAAGTCATCAAGGAGCGCCTCGGCTTTTCCAACGGT
ATCCTGCAAGGTATGGCCACACCCTGCATCGTTGTGGATACGCAGGAAAAAATATCCTACATCAACCAGCCGGCCCTCAC
GCTGCTGCATGCACAGGGTTCCGCAGACAGCTGGACCGGACAATCCATCGGCAAACTGTTCCACAACGACGCATCGCGCC
GCACCATTCTGGGCGATACAGTGCGCGACAGGCAGTCGCAGACCAACAAAGAACTGGTGCTGCAACGCAACGGAGAAGAC
ATTTTCCTGCGGGTGGACACCGCGCCTCTGCATGACCTTGACGGTACCCTGCTGGGAGCTTTCGGCCTGTACACCGACAT
GACCGAAAACCACCGCCAGAACAAAGCCATGCAGGATAAAAACGACATCATAGCGCAGGCTGCCGAACAGGCCGACGGTG
TCTCGCAGAACGTATCTGCCACGGCTGCCGAGCTGTTCGGACTCATCGAAGAGGCCAATCAGGGGGCCGAGGTACAGAAA
GAGCGCACCGGCGAAGCCGCCACAGCCATGGAGGAAATGAACGCCACAGTCATGGAAGTTGCGCGCAGTGCCGCAGAGGC
CGCATCGGGCGCGGATGAAGCGCGTGCCAGAGCCGAAGAAGGCGCGCGCATCGTCAGAGATGTCATAAGCGCCAGCCGCA
AGGTTTCGGATGAAGCGGAAAACCTGAGCAGCAACATGCAGCTGCTGGGCACACAGGTGGAAGGCATCAGTCAGATTATG
AACATGATCAACGACATAGCCGACCAGACAAACCTGCTTGCCCTGAACGCCGCCATTGAAGCCGCACGGGCAGGCGATGC
AGGACGCGGGTTTGCCGTGGTAGCCGACGAAGTGCGTAAACTGGCAGAAAAAACCATGGACGCCACCAAACAGGTGACTG
TGGCCATTACGGAAATTCAGGAAGGCGCCCGCCGCAACCTTGAAGCAACCCGCAAGGCCGTCAGCAGCATCGAGGAAAGT
ACCGACCTTGCCAACCAGTCGGGCGACGCACTGCAGCAGATTCTGAATCTTTCCGTGGAAACTGCCGATCAGGTACGCTC
CATCGCCACCGCCGCAGAACAGCAGTCCGCGGCATCCGAAGAAATAAGCCATGCCACGGCAGAGGTGGACCGCATTTCAA
CGGAAACCCTGCAGGCAATGAACCGGTCGGCCGACGCAGTGAGCCAGCTGGCGGAAGAAGCACGCCGCCTTCAGCAGATT
ATTGAAATGATGACCAGCGAATAG

Upstream 100 bases:

>100_bases
TTCTCTCAAGATTTAGGATATATTTCCGATAAACCGGATATACAGTGTTTCACAACCAGCTAATCAGGGCTTTGCCGTCC
GACCGTAAAGGAGCCTGTGC

Downstream 100 bases:

>100_bases
ACGGCGCGCGTAACACTGCGAGGTATCTGCAAAAGGCCGCTCCCCGCGGGGAGCGGCCTTTGATATTTACAGGCACGGCG
CAAAGAACGGCTGCGCAAGC

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 807; Mature: 807

Protein sequence:

>807_residues
MFDKVTLSTKFYSGSIGVLVLAITLLCSVTMWLVSDGMTQLGTATLQSTTENLVTTIEMQDAITQEKVSSDLSVLEREMQ
GYGSLMLSDLHAHQTRMVNQVTKEAATATIPALVLTSDEGMTPLYENFEIVDRVQKLIGGTATIFQVLPGKLLRISTNVL
KLDGQRATGTYIPESSPVYKTVMRGETYRGKAFVVNAWYITAYKPLRDLGGNIVAVAYVGRKIMTPALTEALASISVGGL
GFAFAYNDKGEMIYHPEHQGKTLSDIGVEQYFAGVQNGLVTYMRDGAEQIAYVRHFEPWGWHIGVQMSRKEALRGMDTMV
LTGSLGVAALALVAGCISTWLLLRSITGSLNKLEGFTAAVATGDYNASVDYKADDAIGKTIAAVRRMVEVIKERLGFSNG
ILQGMATPCIVVDTQEKISYINQPALTLLHAQGSADSWTGQSIGKLFHNDASRRTILGDTVRDRQSQTNKELVLQRNGED
IFLRVDTAPLHDLDGTLLGAFGLYTDMTENHRQNKAMQDKNDIIAQAAEQADGVSQNVSATAAELFGLIEEANQGAEVQK
ERTGEAATAMEEMNATVMEVARSAAEAASGADEARARAEEGARIVRDVISASRKVSDEAENLSSNMQLLGTQVEGISQIM
NMINDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMDATKQVTVAITEIQEGARRNLEATRKAVSSIEES
TDLANQSGDALQQILNLSVETADQVRSIATAAEQQSAASEEISHATAEVDRISTETLQAMNRSADAVSQLAEEARRLQQI
IEMMTSE

Sequences:

>Translated_807_residues
MFDKVTLSTKFYSGSIGVLVLAITLLCSVTMWLVSDGMTQLGTATLQSTTENLVTTIEMQDAITQEKVSSDLSVLEREMQ
GYGSLMLSDLHAHQTRMVNQVTKEAATATIPALVLTSDEGMTPLYENFEIVDRVQKLIGGTATIFQVLPGKLLRISTNVL
KLDGQRATGTYIPESSPVYKTVMRGETYRGKAFVVNAWYITAYKPLRDLGGNIVAVAYVGRKIMTPALTEALASISVGGL
GFAFAYNDKGEMIYHPEHQGKTLSDIGVEQYFAGVQNGLVTYMRDGAEQIAYVRHFEPWGWHIGVQMSRKEALRGMDTMV
LTGSLGVAALALVAGCISTWLLLRSITGSLNKLEGFTAAVATGDYNASVDYKADDAIGKTIAAVRRMVEVIKERLGFSNG
ILQGMATPCIVVDTQEKISYINQPALTLLHAQGSADSWTGQSIGKLFHNDASRRTILGDTVRDRQSQTNKELVLQRNGED
IFLRVDTAPLHDLDGTLLGAFGLYTDMTENHRQNKAMQDKNDIIAQAAEQADGVSQNVSATAAELFGLIEEANQGAEVQK
ERTGEAATAMEEMNATVMEVARSAAEAASGADEARARAEEGARIVRDVISASRKVSDEAENLSSNMQLLGTQVEGISQIM
NMINDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMDATKQVTVAITEIQEGARRNLEATRKAVSSIEES
TDLANQSGDALQQILNLSVETADQVRSIATAAEQQSAASEEISHATAEVDRISTETLQAMNRSADAVSQLAEEARRLQQI
IEMMTSE
>Mature_807_residues
MFDKVTLSTKFYSGSIGVLVLAITLLCSVTMWLVSDGMTQLGTATLQSTTENLVTTIEMQDAITQEKVSSDLSVLEREMQ
GYGSLMLSDLHAHQTRMVNQVTKEAATATIPALVLTSDEGMTPLYENFEIVDRVQKLIGGTATIFQVLPGKLLRISTNVL
KLDGQRATGTYIPESSPVYKTVMRGETYRGKAFVVNAWYITAYKPLRDLGGNIVAVAYVGRKIMTPALTEALASISVGGL
GFAFAYNDKGEMIYHPEHQGKTLSDIGVEQYFAGVQNGLVTYMRDGAEQIAYVRHFEPWGWHIGVQMSRKEALRGMDTMV
LTGSLGVAALALVAGCISTWLLLRSITGSLNKLEGFTAAVATGDYNASVDYKADDAIGKTIAAVRRMVEVIKERLGFSNG
ILQGMATPCIVVDTQEKISYINQPALTLLHAQGSADSWTGQSIGKLFHNDASRRTILGDTVRDRQSQTNKELVLQRNGED
IFLRVDTAPLHDLDGTLLGAFGLYTDMTENHRQNKAMQDKNDIIAQAAEQADGVSQNVSATAAELFGLIEEANQGAEVQK
ERTGEAATAMEEMNATVMEVARSAAEAASGADEARARAEEGARIVRDVISASRKVSDEAENLSSNMQLLGTQVEGISQIM
NMINDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMDATKQVTVAITEIQEGARRNLEATRKAVSSIEES
TDLANQSGDALQQILNLSVETADQVRSIATAAEQQSAASEEISHATAEVDRISTETLQAMNRSADAVSQLAEEARRLQQI
IEMMTSE

Specific function: Mediates Taxis To The Sugars Ribose And Galactose VIa An Interaction With The Periplasmic Ribose- Or Galactose-Binding Proteins. Chemotactic-Signal Transducers Respond To Changes In The Concentration Of Attractants And Repellents In The Environment, Trans

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=281, Percent_Identity=31.3167259786477, Blast_Score=107, Evalue=3e-24,
Organism=Escherichia coli, GI1788195, Length=211, Percent_Identity=32.7014218009479, Blast_Score=106, Evalue=5e-24,
Organism=Escherichia coli, GI2367378, Length=211, Percent_Identity=32.7014218009479, Blast_Score=104, Evalue=2e-23,
Organism=Escherichia coli, GI1788194, Length=251, Percent_Identity=30.6772908366534, Blast_Score=101, Evalue=1e-22,
Organism=Escherichia coli, GI1789453, Length=248, Percent_Identity=29.4354838709677, Blast_Score=79, Evalue=9e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF00989 PAS [H]

EC number: NA

Molecular weight: Translated: 87167; Mature: 87167

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: PS50885 HAMP ; PS50113 PAC ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDKVTLSTKFYSGSIGVLVLAITLLCSVTMWLVSDGMTQLGTATLQSTTENLVTTIEMQ
CCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEHHHH
DAITQEKVSSDLSVLEREMQGYGSLMLSDLHAHQTRMVNQVTKEAATATIPALVLTSDEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCC
MTPLYENFEIVDRVQKLIGGTATIFQVLPGKLLRISTNVLKLDGQRATGTYIPESSPVYK
CCCHHHHHHHHHHHHHHHCCHHHHHHHCCCHHEEEECCEEEECCCCCCCCCCCCCCHHHH
TVMRGETYRGKAFVVNAWYITAYKPLRDLGGNIVAVAYVGRKIMTPALTEALASISVGGL
HHHCCCCCCCCEEEEEEEEEEEEHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCC
GFAFAYNDKGEMIYHPEHQGKTLSDIGVEQYFAGVQNGLVTYMRDGAEQIAYVRHFEPWG
EEEEEECCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCC
WHIGVQMSRKEALRGMDTMVLTGSLGVAALALVAGCISTWLLLRSITGSLNKLEGFTAAV
EEEEEEECHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCEEEE
ATGDYNASVDYKADDAIGKTIAAVRRMVEVIKERLGFSNGILQGMATPCIVVDTQEKISY
EECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEECHHHHHH
INQPALTLLHAQGSADSWTGQSIGKLFHNDASRRTILGDTVRDRQSQTNKELVLQRNGED
HCCCHHEEEECCCCCCCCCHHHHHHHHHCCCCCCEECCCHHHHHHHCCCHHEEEEECCCE
IFLRVDTAPLHDLDGTLLGAFGLYTDMTENHRQNKAMQDKNDIIAQAAEQADGVSQNVSA
EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHH
TAAELFGLIEEANQGAEVQKERTGEAATAMEEMNATVMEVARSAAEAASGADEARARAEE
HHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
GARIVRDVISASRKVSDEAENLSSNMQLLGTQVEGISQIMNMINDIADQTNLLALNAAIE
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHH
AARAGDAGRGFAVVADEVRKLAEKTMDATKQVTVAITEIQEGARRNLEATRKAVSSIEES
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
TDLANQSGDALQQILNLSVETADQVRSIATAAEQQSAASEEISHATAEVDRISTETLQAM
HHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NRSADAVSQLAEEARRLQQIIEMMTSE
HCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFDKVTLSTKFYSGSIGVLVLAITLLCSVTMWLVSDGMTQLGTATLQSTTENLVTTIEMQ
CCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEHHHH
DAITQEKVSSDLSVLEREMQGYGSLMLSDLHAHQTRMVNQVTKEAATATIPALVLTSDEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCC
MTPLYENFEIVDRVQKLIGGTATIFQVLPGKLLRISTNVLKLDGQRATGTYIPESSPVYK
CCCHHHHHHHHHHHHHHHCCHHHHHHHCCCHHEEEECCEEEECCCCCCCCCCCCCCHHHH
TVMRGETYRGKAFVVNAWYITAYKPLRDLGGNIVAVAYVGRKIMTPALTEALASISVGGL
HHHCCCCCCCCEEEEEEEEEEEEHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCC
GFAFAYNDKGEMIYHPEHQGKTLSDIGVEQYFAGVQNGLVTYMRDGAEQIAYVRHFEPWG
EEEEEECCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCC
WHIGVQMSRKEALRGMDTMVLTGSLGVAALALVAGCISTWLLLRSITGSLNKLEGFTAAV
EEEEEEECHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCEEEE
ATGDYNASVDYKADDAIGKTIAAVRRMVEVIKERLGFSNGILQGMATPCIVVDTQEKISY
EECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEECHHHHHH
INQPALTLLHAQGSADSWTGQSIGKLFHNDASRRTILGDTVRDRQSQTNKELVLQRNGED
HCCCHHEEEECCCCCCCCCHHHHHHHHHCCCCCCEECCCHHHHHHHCCCHHEEEEECCCE
IFLRVDTAPLHDLDGTLLGAFGLYTDMTENHRQNKAMQDKNDIIAQAAEQADGVSQNVSA
EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHH
TAAELFGLIEEANQGAEVQKERTGEAATAMEEMNATVMEVARSAAEAASGADEARARAEE
HHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
GARIVRDVISASRKVSDEAENLSSNMQLLGTQVEGISQIMNMINDIADQTNLLALNAAIE
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHH
AARAGDAGRGFAVVADEVRKLAEKTMDATKQVTVAITEIQEGARRNLEATRKAVSSIEES
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
TDLANQSGDALQQILNLSVETADQVRSIATAAEQQSAASEEISHATAEVDRISTETLQAM
HHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NRSADAVSQLAEEARRLQQIIEMMTSE
HCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1548224 [H]