| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78357457
Identifier: 78357457
GI number: 78357457
Start: 2434802
End: 2437369
Strand: Direct
Name: 78357457
Synonym: Dde_2414
Alternate gene names: NA
Gene position: 2434802-2437369 (Clockwise)
Preceding gene: 78357454
Following gene: 78357458
Centisome position: 65.27
GC content: 65.3
Gene sequence:
>2568_bases ATGGATCTGTTCCTTGGCAAAAAAACACAGCGCACCTGCGCTGTCCGGATAATAATATTATACTGTTACGTTTTCTGCCG TCCAGCCTGCAGCACCGCTCCGCTCAAGTCGGCCGCGATGCCGCCGGCCCCTCGTGGCCGGCAGAAGCGTACATGTCTGT TCGCACAATCGGCCCGCTTTGTCATCCGCTGTTTTGTACTGCCGCGCTTTGTCAAGCGCGGCACTTTACGATATGAAGCG GGCACACCTTACGCAGGAGACAAAATGCCGCAGCAGCACGCCACCCCCGCGCCCGCCATTCCCGTTACACCGCCTGCCGG AAACCGCAGCAGTCGCGCCGTTTATTTACTTTTTCGCTTACTGGCCGTCTGCACTCTTCTGTATCTTGCCGGTACCTGCC TGCAGGGCTGCGCCCCCCGCACCCCGCAGGGGCAGGAGTCGGGCCTGCCGTCCAGCGACGTGCCCAGAGCAGACCCCGGC TATGTGCAGTGGCTTTCGCGCCAGTCCATGCTGAGTGAATCGCAGCGACTTGCGGATATTGTATCAGGCTCTGCACTGCA ATGGCGCAAAGGAGGACTGCGCCCCGCCCCCGCCGCGCTACTGCGCGAAGCTGACACATGGCTCACCGTACGACCGGAAT CAGTACTGGGCAAAAGCAGCGAGCCGGTTTTCGGCGTGCTGGCAGACAGGAGAGTGTGGCAGGCGCTGCAAAAGCTGGGC ATCCGGGGCATGCTGCCCGCTCCGGTACATGTGACGGGCGGCCTGTGGGGATACGACCTTACAGCAGTCCGCGGAGACGA CATCATACAGTACGGCTTTGCCGATGCCTGCGGCACACAGGAACATTTTCTGCACCTGCTCCGCATGGCCAATGCCCACG GAGCGGTGCTGGGCACCATGCTCACCCCCGCGGCCACCGGCATGGGGCCGGACTTTTTCCTCGCGGCACGGGGCAAGCCG GGCTACGCGGGAATCTACTGCATGATAGACCTGCCGCGTGACAGCTGGAAACTGCTGCCTGCCGTACAGTCGGAATGGCA GGGTACCTTTCCCGACGAAGCGGCGGTTACTGCCCTGCGCGGCAAAGGGCTGCTGCCGCCACCGCTTGCAGCCGCGCGCA CAGGCAACCCGCTGCGCTGGGCGGTAACAGGCGAAGTGCGCGGCATAGACGGCGAATTACGCAGGTGGGCATATCTTGCT CATGAAGTGCCCACCCGTCCGGTGCTCAACTGGACCGATCCTTCCGCCGCGGCGCGGCGCATCATGTCCGGCTCGGTGAT ACGGCAGACAGGAGAACTGGGAACCGCTTTGGCGGGGCTGACCCTGCAGCCGTTCAGCGGGGCAGTCATAGACGAAAACG ACCAGCGCGGCCCTGCCGCACCGCTGCTGGATGCCGCCCGCACCCTTGCCGCCGAAAACAGACGCTACGGCGGATGGTCG CTGCTGACAGATACCATGCAGCTGCCGCTGCTGACAGCGCTGCTGGACAGCGGCCCCGACATGGCCGTTGACATGTACAC CCCGCCCATGGCCGCACACGCGCTGCTGACCGGCAATGCGCAGGCACTGCGTCTGTCGCTGGACATGCTGCGCACGGCCG GCATCGACCACCGCAGGCTCATGCATCCGGTCATGTGGGGACACGGCATTGACTACACGCTGGCGCATCTGGCTCCGCCC CCTTACGGGCCTGAACCTGTCGTGCAATGGCAGGGCAGCCGCATCAGAGCTTCGGCAGTGCAGCGGCACATCATGGACCA GCTGAGGGCCGCAGTGGACGAGCCGGTACTGCACCGCGCAACGGCCGGACGCGTTTACTGCACCACCCCTGCAGGCATCG CCGCGCAGGCGCTGGGACTCAAGGACCAGCGCACGGGACTGCGCGCCATAACACCGGAGATAATCCGCGGGACCCTGCTG CTGGCCTCATGGAACGCGCTGCTGCCGGGGGGCTTCATGCTCGACGGCCGCGATCTGGCCGGTGCCATGCCCCTGCCTGC CGCCAGTCTGCCGGAAGAAGATGTCGAACAGCATCCTGAACTGCTTGGCCGCGGAGCATATGCACTGGGGTCGGGCTATG ATTCCGTCATGATTTCACGGCAGGGACTGCCCGCAGCCAGAACTCTGCACGACAGCCTGCCCGCCCAGATGCTGCACGAC GGTTCATACGGCAGCGCCATGGCCGCGGTGCTGTCCGCCAGAAGGCGGCTGGGCGTTCCGCTGGCGGAACTTGTCGATAC CCCCGCGGTTTCGGGCAGCGGCACCGCGGCCACAGTCCTTGCACTGCCGCCGGACAACGTCCGCGCCGCACCGCGCTGGC TGCTGGTGTGTGCCAACTTCAGCCGCAAGCCGCAGCACGAACGCTTTACCCTGCGCCTGCCGCCCGCCGTGATAGAAACA GCAAAAGACATACTGCCCGCAGACGGTGCGTTTGCGCCAGCAGCCGCCCCGACGCAGGAACCGCAGCGGACTCCCCCCGG CCTGCAGAACGGCCGGCTGAGCATCCGGCTGCAACCGTGGGAAATACGCGCCCTGTTGCTGGAAGCTGCGCCCGCCCCCG CGCGCTGA
Upstream 100 bases:
>100_bases CGCACCGGTTTCCTTGTCTGCAATAAGCACCAGCACGGGACACTCTTCCATGCATCCCCCGCAACGCCTGCAGGCGTCGC CGTCAACTTCAAAAAAACTC
Downstream 100 bases:
>100_bases GCCGAAAATGCAGCGCGCACAACAACACCGGCACGGCGTAACCGGCCATGCTCCGGCAGTCCCCGCCTGCCTTCTTTACG GTCAAAAAAACGACACCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosidase
Number of amino acids: Translated: 855; Mature: 855
Protein sequence:
>855_residues MDLFLGKKTQRTCAVRIIILYCYVFCRPACSTAPLKSAAMPPAPRGRQKRTCLFAQSARFVIRCFVLPRFVKRGTLRYEA GTPYAGDKMPQQHATPAPAIPVTPPAGNRSSRAVYLLFRLLAVCTLLYLAGTCLQGCAPRTPQGQESGLPSSDVPRADPG YVQWLSRQSMLSESQRLADIVSGSALQWRKGGLRPAPAALLREADTWLTVRPESVLGKSSEPVFGVLADRRVWQALQKLG IRGMLPAPVHVTGGLWGYDLTAVRGDDIIQYGFADACGTQEHFLHLLRMANAHGAVLGTMLTPAATGMGPDFFLAARGKP GYAGIYCMIDLPRDSWKLLPAVQSEWQGTFPDEAAVTALRGKGLLPPPLAAARTGNPLRWAVTGEVRGIDGELRRWAYLA HEVPTRPVLNWTDPSAAARRIMSGSVIRQTGELGTALAGLTLQPFSGAVIDENDQRGPAAPLLDAARTLAAENRRYGGWS LLTDTMQLPLLTALLDSGPDMAVDMYTPPMAAHALLTGNAQALRLSLDMLRTAGIDHRRLMHPVMWGHGIDYTLAHLAPP PYGPEPVVQWQGSRIRASAVQRHIMDQLRAAVDEPVLHRATAGRVYCTTPAGIAAQALGLKDQRTGLRAITPEIIRGTLL LASWNALLPGGFMLDGRDLAGAMPLPAASLPEEDVEQHPELLGRGAYALGSGYDSVMISRQGLPAARTLHDSLPAQMLHD GSYGSAMAAVLSARRRLGVPLAELVDTPAVSGSGTAATVLALPPDNVRAAPRWLLVCANFSRKPQHERFTLRLPPAVIET AKDILPADGAFAPAAAPTQEPQRTPPGLQNGRLSIRLQPWEIRALLLEAAPAPAR
Sequences:
>Translated_855_residues MDLFLGKKTQRTCAVRIIILYCYVFCRPACSTAPLKSAAMPPAPRGRQKRTCLFAQSARFVIRCFVLPRFVKRGTLRYEA GTPYAGDKMPQQHATPAPAIPVTPPAGNRSSRAVYLLFRLLAVCTLLYLAGTCLQGCAPRTPQGQESGLPSSDVPRADPG YVQWLSRQSMLSESQRLADIVSGSALQWRKGGLRPAPAALLREADTWLTVRPESVLGKSSEPVFGVLADRRVWQALQKLG IRGMLPAPVHVTGGLWGYDLTAVRGDDIIQYGFADACGTQEHFLHLLRMANAHGAVLGTMLTPAATGMGPDFFLAARGKP GYAGIYCMIDLPRDSWKLLPAVQSEWQGTFPDEAAVTALRGKGLLPPPLAAARTGNPLRWAVTGEVRGIDGELRRWAYLA HEVPTRPVLNWTDPSAAARRIMSGSVIRQTGELGTALAGLTLQPFSGAVIDENDQRGPAAPLLDAARTLAAENRRYGGWS LLTDTMQLPLLTALLDSGPDMAVDMYTPPMAAHALLTGNAQALRLSLDMLRTAGIDHRRLMHPVMWGHGIDYTLAHLAPP PYGPEPVVQWQGSRIRASAVQRHIMDQLRAAVDEPVLHRATAGRVYCTTPAGIAAQALGLKDQRTGLRAITPEIIRGTLL LASWNALLPGGFMLDGRDLAGAMPLPAASLPEEDVEQHPELLGRGAYALGSGYDSVMISRQGLPAARTLHDSLPAQMLHD GSYGSAMAAVLSARRRLGVPLAELVDTPAVSGSGTAATVLALPPDNVRAAPRWLLVCANFSRKPQHERFTLRLPPAVIET AKDILPADGAFAPAAAPTQEPQRTPPGLQNGRLSIRLQPWEIRALLLEAAPAPAR >Mature_855_residues MDLFLGKKTQRTCAVRIIILYCYVFCRPACSTAPLKSAAMPPAPRGRQKRTCLFAQSARFVIRCFVLPRFVKRGTLRYEA GTPYAGDKMPQQHATPAPAIPVTPPAGNRSSRAVYLLFRLLAVCTLLYLAGTCLQGCAPRTPQGQESGLPSSDVPRADPG YVQWLSRQSMLSESQRLADIVSGSALQWRKGGLRPAPAALLREADTWLTVRPESVLGKSSEPVFGVLADRRVWQALQKLG IRGMLPAPVHVTGGLWGYDLTAVRGDDIIQYGFADACGTQEHFLHLLRMANAHGAVLGTMLTPAATGMGPDFFLAARGKP GYAGIYCMIDLPRDSWKLLPAVQSEWQGTFPDEAAVTALRGKGLLPPPLAAARTGNPLRWAVTGEVRGIDGELRRWAYLA HEVPTRPVLNWTDPSAAARRIMSGSVIRQTGELGTALAGLTLQPFSGAVIDENDQRGPAAPLLDAARTLAAENRRYGGWS LLTDTMQLPLLTALLDSGPDMAVDMYTPPMAAHALLTGNAQALRLSLDMLRTAGIDHRRLMHPVMWGHGIDYTLAHLAPP PYGPEPVVQWQGSRIRASAVQRHIMDQLRAAVDEPVLHRATAGRVYCTTPAGIAAQALGLKDQRTGLRAITPEIIRGTLL LASWNALLPGGFMLDGRDLAGAMPLPAASLPEEDVEQHPELLGRGAYALGSGYDSVMISRQGLPAARTLHDSLPAQMLHD GSYGSAMAAVLSARRRLGVPLAELVDTPAVSGSGTAATVLALPPDNVRAAPRWLLVCANFSRKPQHERFTLRLPPAVIET AKDILPADGAFAPAAAPTQEPQRTPPGLQNGRLSIRLQPWEIRALLLEAAPAPAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 91972; Mature: 91972
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLFLGKKTQRTCAVRIIILYCYVFCRPACSTAPLKSAAMPPAPRGRQKRTCLFAQSARF CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHH VIRCFVLPRFVKRGTLRYEAGTPYAGDKMPQQHATPAPAIPVTPPAGNRSSRAVYLLFRL HHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH LAVCTLLYLAGTCLQGCAPRTPQGQESGLPSSDVPRADPGYVQWLSRQSMLSESQRLADI HHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH VSGSALQWRKGGLRPAPAALLREADTWLTVRPESVLGKSSEPVFGVLADRRVWQALQKLG HCCCCCHHHCCCCCCCHHHHHHCCCCEEEECCHHHHCCCCCCEEEHHHHHHHHHHHHHCC IRGMLPAPVHVTGGLWGYDLTAVRGDDIIQYGFADACGTQEHFLHLLRMANAHGAVLGTM CCCCCCCCEEEECCCCCCEEEEECCCCEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHH LTPAATGMGPDFFLAARGKPGYAGIYCMIDLPRDSWKLLPAVQSEWQGTFPDEAAVTALR HHHHHCCCCCCEEEEECCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHC GKGLLPPPLAAARTGNPLRWAVTGEVRGIDGELRRWAYLAHEVPTRPVLNWTDPSAAARR CCCCCCCCCHHHCCCCCEEEEEECCEECCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH IMSGSVIRQTGELGTALAGLTLQPFSGAVIDENDQRGPAAPLLDAARTLAAENRRYGGWS HHCCHHHHHHHHHHHHHHCCEECCCCCCEECCCCCCCCCCHHHHHHHHHHHCCCCCCCHH LLTDTMQLPLLTALLDSGPDMAVDMYTPPMAAHALLTGNAQALRLSLDMLRTAGIDHRRL HHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHEEECCCHHHHHHHHHHHHHCCCCHHHH MHPVMWGHGIDYTLAHLAPPPYGPEPVVQWQGSRIRASAVQRHIMDQLRAAVDEPVLHRA HHHHHHCCCCCCHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHH TAGRVYCTTPAGIAAQALGLKDQRTGLRAITPEIIRGTLLLASWNALLPGGFMLDGRDLA CCCEEEEECCCCHHHHHHCCCHHHCCCHHCCHHHHHHHHHEEECCHHCCCCEEECCCCCC GAMPLPAASLPEEDVEQHPELLGRGAYALGSGYDSVMISRQGLPAARTLHDSLPAQMLHD CCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCCCCEEEECCCCCHHHHHHHHCCHHHHCC GSYGSAMAAVLSARRRLGVPLAELVDTPAVSGSGTAATVLALPPDNVRAAPRWLLVCANF CCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEECC SRKPQHERFTLRLPPAVIETAKDILPADGAFAPAAAPTQEPQRTPPGLQNGRLSIRLQPW CCCCCCCEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCH EIRALLLEAAPAPAR HEEHHHHHCCCCCCC >Mature Secondary Structure MDLFLGKKTQRTCAVRIIILYCYVFCRPACSTAPLKSAAMPPAPRGRQKRTCLFAQSARF CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHH VIRCFVLPRFVKRGTLRYEAGTPYAGDKMPQQHATPAPAIPVTPPAGNRSSRAVYLLFRL HHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH LAVCTLLYLAGTCLQGCAPRTPQGQESGLPSSDVPRADPGYVQWLSRQSMLSESQRLADI HHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH VSGSALQWRKGGLRPAPAALLREADTWLTVRPESVLGKSSEPVFGVLADRRVWQALQKLG HCCCCCHHHCCCCCCCHHHHHHCCCCEEEECCHHHHCCCCCCEEEHHHHHHHHHHHHHCC IRGMLPAPVHVTGGLWGYDLTAVRGDDIIQYGFADACGTQEHFLHLLRMANAHGAVLGTM CCCCCCCCEEEECCCCCCEEEEECCCCEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHH LTPAATGMGPDFFLAARGKPGYAGIYCMIDLPRDSWKLLPAVQSEWQGTFPDEAAVTALR HHHHHCCCCCCEEEEECCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHC GKGLLPPPLAAARTGNPLRWAVTGEVRGIDGELRRWAYLAHEVPTRPVLNWTDPSAAARR CCCCCCCCCHHHCCCCCEEEEEECCEECCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH IMSGSVIRQTGELGTALAGLTLQPFSGAVIDENDQRGPAAPLLDAARTLAAENRRYGGWS HHCCHHHHHHHHHHHHHHCCEECCCCCCEECCCCCCCCCCHHHHHHHHHHHCCCCCCCHH LLTDTMQLPLLTALLDSGPDMAVDMYTPPMAAHALLTGNAQALRLSLDMLRTAGIDHRRL HHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHEEECCCHHHHHHHHHHHHHCCCCHHHH MHPVMWGHGIDYTLAHLAPPPYGPEPVVQWQGSRIRASAVQRHIMDQLRAAVDEPVLHRA HHHHHHCCCCCCHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHH TAGRVYCTTPAGIAAQALGLKDQRTGLRAITPEIIRGTLLLASWNALLPGGFMLDGRDLA CCCEEEEECCCCHHHHHHCCCHHHCCCHHCCHHHHHHHHHEEECCHHCCCCEEECCCCCC GAMPLPAASLPEEDVEQHPELLGRGAYALGSGYDSVMISRQGLPAARTLHDSLPAQMLHD CCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCCCCEEEECCCCCHHHHHHHHCCHHHHCC GSYGSAMAAVLSARRRLGVPLAELVDTPAVSGSGTAATVLALPPDNVRAAPRWLLVCANF CCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEECC SRKPQHERFTLRLPPAVIETAKDILPADGAFAPAAAPTQEPQRTPPGLQNGRLSIRLQPW CCCCCCCEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCH EIRALLLEAAPAPAR HEEHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA