Click here to switch to the map view.

The map label for this gene is yrbG [H]

Identifier: 78357452

GI number: 78357452

Start: 2428312

End: 2429331

Strand: Direct

Name: yrbG [H]

Synonym: Dde_2409

Alternate gene names: 78357452

Gene position: 2428312-2429331 (Clockwise)

Preceding gene: 78357451

Following gene: 78357454

Centisome position: 65.1

GC content: 60.78

Gene sequence:

>1020_bases
ATGCCTATTTTCGATCTCTTTTTCCTCGCACTGGGCGGCCTGCTGCTGTGGTTCGGCGCCGACAGACTGGTGGAAGGCGC
CTCTGCGCTGGCCCGCCGCGTCGGCATCTCCGAACTGGTCATAGGCCTTACCATCGTGGCCCTCGGCACGTCTCTTCCGG
AATTTCTCGTGTCTTTCACAGCCGCGGTCACCGGATATTCCTCCATCTCCGTGGCCAATGTGGTGGGGTCAAACATATTC
AATCTCGGACTCATTCTGGGCGGTGTGGCCATGCTGCGTCCCGTCATGCCCGAGCGCGACATAATGCGGCGCGACGCCCC
CATTCTGGTCTGCTGCACCACCTTCATACTGGTCTGCGCTTCCGTCACGGGGTCGCTGCCACGCTGGGCCGGTGCCGTGC
TTACCCTGACGTTTGCGGGATACATCGCATGGCTCATCATCAAAAGCCGCATGGAATTCGCAGCAGTAAACGCTTCGCTG
CAGACAGTGCTGAGCAGCCGGACGGGTTCTACTCTGAACAGTCCCGTGCTGCCCGGCGAACCGGACAGGACAACAGCAGA
ACTGCCTCTCTGGCGGGCTCTTGGCGGAATAGCAGCCGGCCTCATTGCCCTTACACTGGGCAGCAGGCTGGTGGTCAACG
GTGCAACCGCCATTGCCGCATGGCTGGGGGTAAGTGAATGGCTTATCGGGCTGACCATTGTGGCGGGCGGCACTTCGCTG
CCCGAACTGGTCACCTGCGTCGTGGCATCGTTCAAGGGACGCAATGAAATGATGCTGGGCAACCTCATCGGCAGCGACCT
GTTCAACTTTGCGGGAGTACTGGGTATAACGGCCCTGCTGCGACCGCTCAGCGTTGATGCATCGGCACTTCCCAACCTTG
CGCTCAGCGTCTTTACAGTGCTGCTTATTCTGCTGCTGCTCAGACTGCGCGGCAGACTGGGCAAAGCGGAAGGCCTGCTG
CTGCTCACATTCGGACTGGGACGCTGGGTGCTGGACGCATTCAGCACGCCCCCGCTGTAA

Upstream 100 bases:

>100_bases
CCCGCCTGCCCCGCAGGCCGGCGGCCTGCATGTGTATATATTCCACCCTTAACCGGTTTCGGGCTTTTCATCCGCCGCAA
AACCCAGTATTCAATCAATC

Downstream 100 bases:

>100_bases
TCGGCGGTCCGCCACCGGCAACCGGACCGGCATCCCTCTGCGGGTGCCGGTCTTTCAATACTCAGTCAGTACTGTTCCGG
TCTGTCAGATGCCTTCCTCG

Product: K+-dependent Na+/Ca+ exchanger-like protein

Products: Na (I) [Cytoplasm]; Ca (II) [Periplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 338

Protein sequence:

>339_residues
MPIFDLFFLALGGLLLWFGADRLVEGASALARRVGISELVIGLTIVALGTSLPEFLVSFTAAVTGYSSISVANVVGSNIF
NLGLILGGVAMLRPVMPERDIMRRDAPILVCCTTFILVCASVTGSLPRWAGAVLTLTFAGYIAWLIIKSRMEFAAVNASL
QTVLSSRTGSTLNSPVLPGEPDRTTAELPLWRALGGIAAGLIALTLGSRLVVNGATAIAAWLGVSEWLIGLTIVAGGTSL
PELVTCVVASFKGRNEMMLGNLIGSDLFNFAGVLGITALLRPLSVDASALPNLALSVFTVLLILLLLRLRGRLGKAEGLL
LLTFGLGRWVLDAFSTPPL

Sequences:

>Translated_339_residues
MPIFDLFFLALGGLLLWFGADRLVEGASALARRVGISELVIGLTIVALGTSLPEFLVSFTAAVTGYSSISVANVVGSNIF
NLGLILGGVAMLRPVMPERDIMRRDAPILVCCTTFILVCASVTGSLPRWAGAVLTLTFAGYIAWLIIKSRMEFAAVNASL
QTVLSSRTGSTLNSPVLPGEPDRTTAELPLWRALGGIAAGLIALTLGSRLVVNGATAIAAWLGVSEWLIGLTIVAGGTSL
PELVTCVVASFKGRNEMMLGNLIGSDLFNFAGVLGITALLRPLSVDASALPNLALSVFTVLLILLLLRLRGRLGKAEGLL
LLTFGLGRWVLDAFSTPPL
>Mature_338_residues
PIFDLFFLALGGLLLWFGADRLVEGASALARRVGISELVIGLTIVALGTSLPEFLVSFTAAVTGYSSISVANVVGSNIFN
LGLILGGVAMLRPVMPERDIMRRDAPILVCCTTFILVCASVTGSLPRWAGAVLTLTFAGYIAWLIIKSRMEFAAVNASLQ
TVLSSRTGSTLNSPVLPGEPDRTTAELPLWRALGGIAAGLIALTLGSRLVVNGATAIAAWLGVSEWLIGLTIVAGGTSLP
ELVTCVVASFKGRNEMMLGNLIGSDLFNFAGVLGITALLRPLSVDASALPNLALSVFTVLLILLLLRLRGRLGKAEGLLL
LTFGLGRWVLDAFSTPPL

Specific function: Unknown

COG id: COG0530

COG function: function code P; Ca2+/Na+ antiporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium/potassium/calcium exchanger family [H]

Homologues:

Organism=Escherichia coli, GI1789587, Length=309, Percent_Identity=34.6278317152104, Blast_Score=122, Evalue=3e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004481
- InterPro:   IPR004837 [H]

Pfam domain/function: PF01699 Na_Ca_ex [H]

EC number: NA

Molecular weight: Translated: 35532; Mature: 35401

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIFDLFFLALGGLLLWFGADRLVEGASALARRVGISELVIGLTIVALGTSLPEFLVSFT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
AAVTGYSSISVANVVGSNIFNLGLILGGVAMLRPVMPERDIMRRDAPILVCCTTFILVCA
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHH
SVTGSLPRWAGAVLTLTFAGYIAWLIIKSRMEFAAVNASLQTVLSSRTGSTLNSPVLPGE
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDRTTAELPLWRALGGIAAGLIALTLGSRLVVNGATAIAAWLGVSEWLIGLTIVAGGTSL
CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHEECHHHHHHHHHHHHHHHHHHHHEECCCCH
PELVTCVVASFKGRNEMMLGNLIGSDLFNFAGVLGITALLRPLSVDASALPNLALSVFTV
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LLILLLLRLRGRLGKAEGLLLLTFGLGRWVLDAFSTPPL
HHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PIFDLFFLALGGLLLWFGADRLVEGASALARRVGISELVIGLTIVALGTSLPEFLVSFT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
AAVTGYSSISVANVVGSNIFNLGLILGGVAMLRPVMPERDIMRRDAPILVCCTTFILVCA
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHH
SVTGSLPRWAGAVLTLTFAGYIAWLIIKSRMEFAAVNASLQTVLSSRTGSTLNSPVLPGE
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDRTTAELPLWRALGGIAAGLIALTLGSRLVVNGATAIAAWLGVSEWLIGLTIVAGGTSL
CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHEECHHHHHHHHHHHHHHHHHHHHEECCCCH
PELVTCVVASFKGRNEMMLGNLIGSDLFNFAGVLGITALLRPLSVDASALPNLALSVFTV
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LLILLLLRLRGRLGKAEGLLLLTFGLGRWVLDAFSTPPL
HHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; Ca (II) [Cytoplasm] [C]

Specific reaction: Na (I) [Periplasm] + Ca (II) [Cytoplasm] = Na (I) [Cytoplasm] + Ca (II) [Periplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]