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The map label for this gene is yibQ [H]

Identifier: 78356483

GI number: 78356483

Start: 1462729

End: 1464195

Strand: Direct

Name: yibQ [H]

Synonym: Dde_1438

Alternate gene names: 78356483

Gene position: 1462729-1464195 (Clockwise)

Preceding gene: 78356482

Following gene: 78356484

Centisome position: 39.21

GC content: 61.21

Gene sequence:

>1467_bases
ATGACGACGCCGTCAGGCTCCGGTGGCAATTTTATATCACGCATCAGGCGTGTTCTGGACAGATTCAGGTCTTCCACGGC
ACAGCGGTCCGGCGGAGCAGATTCCGCGGGCGGCCTGCTGGCCAACCGTTTTGTGCTGGCAGCGGTGGCGTTTGCCTGCG
GCGTGCTGCTGACCGGCGTGCTGCTTCTTGCGTACTTCAGTCTTTCCGGTACGGCTAGCGCCCCTGCCGACGCTGAACAG
GCACAGTCGGGCGAGGCTCTGCCGTCTGTCCGCGATCTGCTCGATCCTTCGAGCCTTCCCTATGAAGAATCGCTGGGCAG
CTCGCTGGATCAGACCGTCAAGCAGGTGGACTATGCTTTGCTGCGCACGCTGGAACGGCTGGATCTGCCCCGCAGGGCAC
TGGGGCTGCAGCGGGTCGAAGTACGGTCGCACAACGGAGAGGAGTATCATTTCCAGCAGCTGGAGATAAGACTCGGCAAC
GGTCATGATGATTTTATTGCCGGGTTGCGTACGGCTCTGGCCACATGGGTTCCGGCCGCGACTTTGCAGCAGGCCGCCGG
TGGCGCATGGCGCATTTCGCTTGACGGTGTGGTGACGCATGCACTGGCTTTTGCCGTGCTGCAGGAGCAGGAGCCGCAGC
TTCCGGTCGACGGACAGCACAGAGGCACATCAGAGGCCGGCACACCCTTGCCGGAGGCGCAGGATGATGCCGGCAGCCCC
GATGCAGCTGTCACGGGCCGGCCCGAAAGCGGAGCCGCTGCAACGCAGATTCAGGAGCGGGAAAACGACCTGCCCCGTCT
TGCCATAGTCATAGATGACATAGGTGAAAGTATGCGGGCTGTGGAGCGTCTTGTGGCGCTGGAATATCCGGTGACGCTTT
CCATATGGCCGCGTGCAACCTATGCCCGCCGCGCCGCGGATTACGGCTGGCAGCACGGGTGCGAGATAATGATCCACCAG
CCCATGGAGCCGGTGGGCTACCCCCGTGTGAATCCGGGACCGGGAGCCTTGTTTGTCTCCATGACACCGGATCAGATACA
TACTGTGCTAGGCGAAAATCTGGGTATGGTGCCCCATGCCGTAGGCATAAACAACCATATGGGATCGCGCTTTACGCAGG
ACGATGCGGGAGTGCAGGCCGTGGTGGATGAACTGCGCGGCAGAAAGCTGTTTGTGCTGGACAGTGTGACGCATGGCGGT
TCTGTGCTGTACCGTAAGGCGGCGGCAGCCGGATTGCATGCATTCCGGCGTTCGGTGTTTCTTGATGTGGTGCGTGACAA
AAAAAGCATTATGCACCAGCTGGACAAAGCTGCCGGCGTGGCACTGCGTCAGGGCACGGCCATTGCCATAGGGCATCCCA
CGCCTGAAACGCTGGCCGCGCTGGAAGAGTGGCAGCGGGTGCGCAGCCGCAAGATTCAGATTGTCAGTGTGGCGGGGCTT
GATAAAGTGCGGCATCGCAGGCAATAA

Upstream 100 bases:

>100_bases
CTAGGATTATCTGCGGCGGCAGGCCTTGATGTATACACCAGAAAAGACAAGGGCGCGGGAGACCGCGCCCTTTGACCGTT
AAATAAAGGGACTTGTTTGT

Downstream 100 bases:

>100_bases
ACACTGTCGGCGCGCGGATGCGTACCGCGTGCCTAATGCACACACATCACACAAACACACTGCATCGGAGGAACGAACAC
ATGGCAGAAAGAACCTTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 488; Mature: 487

Protein sequence:

>488_residues
MTTPSGSGGNFISRIRRVLDRFRSSTAQRSGGADSAGGLLANRFVLAAVAFACGVLLTGVLLLAYFSLSGTASAPADAEQ
AQSGEALPSVRDLLDPSSLPYEESLGSSLDQTVKQVDYALLRTLERLDLPRRALGLQRVEVRSHNGEEYHFQQLEIRLGN
GHDDFIAGLRTALATWVPAATLQQAAGGAWRISLDGVVTHALAFAVLQEQEPQLPVDGQHRGTSEAGTPLPEAQDDAGSP
DAAVTGRPESGAAATQIQERENDLPRLAIVIDDIGESMRAVERLVALEYPVTLSIWPRATYARRAADYGWQHGCEIMIHQ
PMEPVGYPRVNPGPGALFVSMTPDQIHTVLGENLGMVPHAVGINNHMGSRFTQDDAGVQAVVDELRGRKLFVLDSVTHGG
SVLYRKAAAAGLHAFRRSVFLDVVRDKKSIMHQLDKAAGVALRQGTAIAIGHPTPETLAALEEWQRVRSRKIQIVSVAGL
DKVRHRRQ

Sequences:

>Translated_488_residues
MTTPSGSGGNFISRIRRVLDRFRSSTAQRSGGADSAGGLLANRFVLAAVAFACGVLLTGVLLLAYFSLSGTASAPADAEQ
AQSGEALPSVRDLLDPSSLPYEESLGSSLDQTVKQVDYALLRTLERLDLPRRALGLQRVEVRSHNGEEYHFQQLEIRLGN
GHDDFIAGLRTALATWVPAATLQQAAGGAWRISLDGVVTHALAFAVLQEQEPQLPVDGQHRGTSEAGTPLPEAQDDAGSP
DAAVTGRPESGAAATQIQERENDLPRLAIVIDDIGESMRAVERLVALEYPVTLSIWPRATYARRAADYGWQHGCEIMIHQ
PMEPVGYPRVNPGPGALFVSMTPDQIHTVLGENLGMVPHAVGINNHMGSRFTQDDAGVQAVVDELRGRKLFVLDSVTHGG
SVLYRKAAAAGLHAFRRSVFLDVVRDKKSIMHQLDKAAGVALRQGTAIAIGHPTPETLAALEEWQRVRSRKIQIVSVAGL
DKVRHRRQ
>Mature_487_residues
TTPSGSGGNFISRIRRVLDRFRSSTAQRSGGADSAGGLLANRFVLAAVAFACGVLLTGVLLLAYFSLSGTASAPADAEQA
QSGEALPSVRDLLDPSSLPYEESLGSSLDQTVKQVDYALLRTLERLDLPRRALGLQRVEVRSHNGEEYHFQQLEIRLGNG
HDDFIAGLRTALATWVPAATLQQAAGGAWRISLDGVVTHALAFAVLQEQEPQLPVDGQHRGTSEAGTPLPEAQDDAGSPD
AAVTGRPESGAAATQIQERENDLPRLAIVIDDIGESMRAVERLVALEYPVTLSIWPRATYARRAADYGWQHGCEIMIHQP
MEPVGYPRVNPGPGALFVSMTPDQIHTVLGENLGMVPHAVGINNHMGSRFTQDDAGVQAVVDELRGRKLFVLDSVTHGGS
VLYRKAAAAGLHAFRRSVFLDVVRDKKSIMHQLDKAAGVALRQGTAIAIGHPTPETLAALEEWQRVRSRKIQIVSVAGLD
KVRHRRQ

Specific function: Unknown

COG id: COG2861

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0755 [H]

Homologues:

Organism=Escherichia coli, GI87082298, Length=215, Percent_Identity=34.4186046511628, Blast_Score=130, Evalue=2e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006837
- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF04748 Polysacc_deac_2 [H]

EC number: NA

Molecular weight: Translated: 52612; Mature: 52481

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTPSGSGGNFISRIRRVLDRFRSSTAQRSGGADSAGGLLANRFVLAAVAFACGVLLTGV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LLLAYFSLSGTASAPADAEQAQSGEALPSVRDLLDPSSLPYEESLGSSLDQTVKQVDYAL
HHHHHHHCCCCCCCCCCHHHHCCCCCCHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHH
LRTLERLDLPRRALGLQRVEVRSHNGEEYHFQQLEIRLGNGHDDFIAGLRTALATWVPAA
HHHHHHHCCCHHHHCCHHEEHHCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHCCHH
TLQQAAGGAWRISLDGVVTHALAFAVLQEQEPQLPVDGQHRGTSEAGTPLPEAQDDAGSP
HHHHHCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DAAVTGRPESGAAATQIQERENDLPRLAIVIDDIGESMRAVERLVALEYPVTLSIWPRAT
CCEECCCCCCCCHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHCCCEEEEECCCHH
YARRAADYGWQHGCEIMIHQPMEPVGYPRVNPGPGALFVSMTPDQIHTVLGENLGMVPHA
HHHHHHHCCHHCCCEEEEECCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCCCC
VGINNHMGSRFTQDDAGVQAVVDELRGRKLFVLDSVTHGGSVLYRKAAAAGLHAFRRSVF
CCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
LDVVRDKKSIMHQLDKAAGVALRQGTAIAIGHPTPETLAALEEWQRVRSRKIQIVSVAGL
HHHHHHHHHHHHHHHHHHCCEEECCCEEEECCCCHHHHHHHHHHHHHHHCCEEEEEECCH
DKVRHRRQ
HHHHHCCC
>Mature Secondary Structure 
TTPSGSGGNFISRIRRVLDRFRSSTAQRSGGADSAGGLLANRFVLAAVAFACGVLLTGV
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LLLAYFSLSGTASAPADAEQAQSGEALPSVRDLLDPSSLPYEESLGSSLDQTVKQVDYAL
HHHHHHHCCCCCCCCCCHHHHCCCCCCHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHH
LRTLERLDLPRRALGLQRVEVRSHNGEEYHFQQLEIRLGNGHDDFIAGLRTALATWVPAA
HHHHHHHCCCHHHHCCHHEEHHCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHCCHH
TLQQAAGGAWRISLDGVVTHALAFAVLQEQEPQLPVDGQHRGTSEAGTPLPEAQDDAGSP
HHHHHCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DAAVTGRPESGAAATQIQERENDLPRLAIVIDDIGESMRAVERLVALEYPVTLSIWPRAT
CCEECCCCCCCCHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHCCCEEEEECCCHH
YARRAADYGWQHGCEIMIHQPMEPVGYPRVNPGPGALFVSMTPDQIHTVLGENLGMVPHA
HHHHHHHCCHHCCCEEEEECCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCCCC
VGINNHMGSRFTQDDAGVQAVVDELRGRKLFVLDSVTHGGSVLYRKAAAAGLHAFRRSVF
CCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
LDVVRDKKSIMHQLDKAAGVALRQGTAIAIGHPTPETLAALEEWQRVRSRKIQIVSVAGL
HHHHHHHHHHHHHHHHHHCCEEECCCEEEECCCCHHHHHHHHHHHHHHHCCEEEEEECCH
DKVRHRRQ
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]