Click here to switch to the map view.

The map label for this gene is yibP [H]

Identifier: 78356481

GI number: 78356481

Start: 1460204

End: 1461313

Strand: Direct

Name: yibP [H]

Synonym: Dde_1436

Alternate gene names: 78356481

Gene position: 1460204-1461313 (Clockwise)

Preceding gene: 78356480

Following gene: 78356482

Centisome position: 39.15

GC content: 56.85

Gene sequence:

>1110_bases
ATGCGTGGATTTGTGGTGCGGGCTGTTCTGGTGGCCCTGCTGTGCTGCTGCACGGCTGTTACTGCCGTTCAGGCGCAGGA
CCTGACGCGTTCCATCAGGGAGCAGCAGCAGAAAGCTAAAGAACGTGAAGCCAGACTGAAAAAACTGTCAAAACAGGAAG
CGCGTCTGAGCAGAGACATGCAGACCACAGAAGCGCGTATCCGCAGTCTGGAAAAAAGCATTGCCGAAAGTGAGAAAAAG
CTGGCAAAGGTGGAAGCCTCACTGCAGGAGACCGGAGAGCGCCTGAAGCGGCTTTCGGCTGATACACGTGCCGTGCAGGA
TGATCTGGGCCGCCTGCTGGCCACGCTGTGGCCTTTGGATATACAGCGGCGCAGTGCCGGTGTTATTCCGCCGGAAGGCT
GGGATGCGGCAAGCCGCAGATATGTGTGGACCAGATCGCTGTACGAAAAGGTGGATGCCCGTCAGAAGGAACTGGCCCGC
CGTCAGGCCGAGGTGGAAAGCGTGCTGGCCGAACGCCAGACGCTGGCTGACGAAGCACGGAGCAGGCTGGAGGCGGTGAA
CGCGGTCAAGAAAGACCTGCTGCAGAATAAGCTGAGCTACCGGCGCAAGCTGCAGACAGTGCAGAAAAGCAAGGCCAGCG
CCGAGGCGGAACTGCACAATGTGCTTGATGTCATCCGCAGTCTGAACTTCCGGCTGGAAAAACAGCGCGGCGGCAGAGAT
ATAGCACTGCTGAAGGGCATTTTGCCATGGCCTGCCGACGGGGACGTGGCAGTGCGGTATAACCTGAAGGCTTCACCGCC
TGTACGCGGTGTGGGACTGCGTGTGCACAAAAATGCTCCGGTAAAGGCTGTGGCCTGGGGCAAGGTGATGCATAATGATG
TGCTGCGGGGGTTCGGCAGGGTTGTCATCCTGATGCACGGCACGGATTATTACAGCCTGTATGCATATCTTTCGGACAGT
TTTGCAGAGGTGGGGGAGAATGTGAAACAGGGCGCGGTCATCGGTACAGCGGGATACTATCCCGATGTGAACGGAGACGG
ATTGTATTTCGAATTGCGTTTTCATCAAAAAGCAATTAACCCTGAAACGTGGTTAACAGCCGTAAAGTGA

Upstream 100 bases:

>100_bases
CCCTGCTTGTACGTGTGGCCAAAGAATGGTGCCGCAAAACGCACCCGCGCTGCGACTCCTGCCCGTTACGGCAGTTTCTT
GAATACGAGGTGGTCTGCTG

Downstream 100 bases:

>100_bases
GTGCTTTCAGGGTGATCGGAGGTTTTATTATGCGTTTGTCCCTGTGGACAGCCACGTTTATTGTTTTTCTGACGCTGACC
GTGTCCATCGGGCCGGGCAA

Product: M24/M37 family peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MRGFVVRAVLVALLCCCTAVTAVQAQDLTRSIREQQQKAKEREARLKKLSKQEARLSRDMQTTEARIRSLEKSIAESEKK
LAKVEASLQETGERLKRLSADTRAVQDDLGRLLATLWPLDIQRRSAGVIPPEGWDAASRRYVWTRSLYEKVDARQKELAR
RQAEVESVLAERQTLADEARSRLEAVNAVKKDLLQNKLSYRRKLQTVQKSKASAEAELHNVLDVIRSLNFRLEKQRGGRD
IALLKGILPWPADGDVAVRYNLKASPPVRGVGLRVHKNAPVKAVAWGKVMHNDVLRGFGRVVILMHGTDYYSLYAYLSDS
FAEVGENVKQGAVIGTAGYYPDVNGDGLYFELRFHQKAINPETWLTAVK

Sequences:

>Translated_369_residues
MRGFVVRAVLVALLCCCTAVTAVQAQDLTRSIREQQQKAKEREARLKKLSKQEARLSRDMQTTEARIRSLEKSIAESEKK
LAKVEASLQETGERLKRLSADTRAVQDDLGRLLATLWPLDIQRRSAGVIPPEGWDAASRRYVWTRSLYEKVDARQKELAR
RQAEVESVLAERQTLADEARSRLEAVNAVKKDLLQNKLSYRRKLQTVQKSKASAEAELHNVLDVIRSLNFRLEKQRGGRD
IALLKGILPWPADGDVAVRYNLKASPPVRGVGLRVHKNAPVKAVAWGKVMHNDVLRGFGRVVILMHGTDYYSLYAYLSDS
FAEVGENVKQGAVIGTAGYYPDVNGDGLYFELRFHQKAINPETWLTAVK
>Mature_369_residues
MRGFVVRAVLVALLCCCTAVTAVQAQDLTRSIREQQQKAKEREARLKKLSKQEARLSRDMQTTEARIRSLEKSIAESEKK
LAKVEASLQETGERLKRLSADTRAVQDDLGRLLATLWPLDIQRRSAGVIPPEGWDAASRRYVWTRSLYEKVDARQKELAR
RQAEVESVLAERQTLADEARSRLEAVNAVKKDLLQNKLSYRRKLQTVQKSKASAEAELHNVLDVIRSLNFRLEKQRGGRD
IALLKGILPWPADGDVAVRYNLKASPPVRGVGLRVHKNAPVKAVAWGKVMHNDVLRGFGRVVILMHGTDYYSLYAYLSDS
FAEVGENVKQGAVIGTAGYYPDVNGDGLYFELRFHQKAINPETWLTAVK

Specific function: Unknown

COG id: COG4942

COG function: function code D; Membrane-bound metallopeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0756 [H]

Homologues:

Organism=Escherichia coli, GI87082297, Length=424, Percent_Identity=24.7641509433962, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI87082174, Length=117, Percent_Identity=30.7692307692308, Blast_Score=62, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 41560; Mature: 41560

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGFVVRAVLVALLCCCTAVTAVQAQDLTRSIREQQQKAKEREARLKKLSKQEARLSRDM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QTTEARIRSLEKSIAESEKKLAKVEASLQETGERLKRLSADTRAVQDDLGRLLATLWPLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
IQRRSAGVIPPEGWDAASRRYVWTRSLYEKVDARQKELARRQAEVESVLAERQTLADEAR
HHHCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRLEAVNAVKKDLLQNKLSYRRKLQTVQKSKASAEAELHNVLDVIRSLNFRLEKQRGGRD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHCCCCH
IALLKGILPWPADGDVAVRYNLKASPPVRGVGLRVHKNAPVKAVAWGKVMHNDVLRGFGR
HHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCEEHHHHHHHHHHHHHHCCCC
VVILMHGTDYYSLYAYLSDSFAEVGENVKQGAVIGTAGYYPDVNGDGLYFELRFHQKAIN
EEEEEECCCHHHHHHHHHHHHHHHCCHHHCCCEEECCCCCCCCCCCCEEEEEEEHHHHCC
PETWLTAVK
HHHHHEECC
>Mature Secondary Structure
MRGFVVRAVLVALLCCCTAVTAVQAQDLTRSIREQQQKAKEREARLKKLSKQEARLSRDM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QTTEARIRSLEKSIAESEKKLAKVEASLQETGERLKRLSADTRAVQDDLGRLLATLWPLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
IQRRSAGVIPPEGWDAASRRYVWTRSLYEKVDARQKELARRQAEVESVLAERQTLADEAR
HHHCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRLEAVNAVKKDLLQNKLSYRRKLQTVQKSKASAEAELHNVLDVIRSLNFRLEKQRGGRD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHCCCCH
IALLKGILPWPADGDVAVRYNLKASPPVRGVGLRVHKNAPVKAVAWGKVMHNDVLRGFGR
HHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCEEHHHHHHHHHHHHHHCCCC
VVILMHGTDYYSLYAYLSDSFAEVGENVKQGAVIGTAGYYPDVNGDGLYFELRFHQKAIN
EEEEEECCCHHHHHHHHHHHHHHHCCHHHCCCEEECCCCCCCCCCCCEEEEEEEHHHHCC
PETWLTAVK
HHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]