| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78356422
Identifier: 78356422
GI number: 78356422
Start: 1394758
End: 1395624
Strand: Direct
Name: 78356422
Synonym: Dde_1375
Alternate gene names: NA
Gene position: 1394758-1395624 (Clockwise)
Preceding gene: 78356421
Following gene: 78356423
Centisome position: 37.39
GC content: 60.67
Gene sequence:
>867_bases ATGCATGATGAGGCAGGACAGCATATGAATCAGGAATCCATAGGAATCATTGCCGGCAGCGGACAGTTTCCCATGCTGGT GGCCCGTGCCGCCCGTCTGGAGGGGCACAGGGTGGTCATGTGCGGCTTTCAGGGGCACACGGACTCCGCACTGGAACACG AGGCCGATGTATGGTCCATGCTCCATCTCGGGCAGCTGGGCAGGCTGATAGATTTTTTTGTGTCCGCTGGTGTGACGCGG CTTTGTTTTGCCGGAGCCATCAGCAAACCCCGTGCTCTTGATCTGCGGCCCGACATGCGCGCGGCCAAGGTGCTTTTCCG GCTGCGCTCCAAAGGCGACGATGTGCTGCTGCGTGCAGTGCTGGCCGAACTGGAATCCGAAGGGCTTGTCATAGTGCAGG CTGCGGAACTGGTGCCCGGACTGCGCGGGCCGGAAGGAGTGCTTACCCGCAGGCAGCCTTCTGCCGAAGAATGGCAGGAT ATCCGTTACGGGTGGCCTGTGGCCATGCAGATAGGTGCGCTGGATATCGGGCAGTGCTTGGTTGTCAGGCGCGGTATGGT GGTAGCCGTGGAAGGTCTGGAAGGCACTGACGCCACGCTGCGCCGCGGGGGCGAACTGGGCGGAGACGGCTGTGTGGCGC TGAAGTTTGTGAAGCCGGGACAGGACGAGCGTATCGACCTGCCCGCTCTCGGGCTGGCAACTGTGCGCACTCTGGCACAG GGCGGATACACATGTCTTTGCTATCAGGCAGGAAATACATTGTTTTTCGACAGAGAGGAGAGTATCTCTCTGGCCGATAA ACATGGTATATCCATAGTGGGAATCGGTCCCGCACTGTCGGCGGAGCTGACCGCCGCCGCGGAGTAA
Upstream 100 bases:
>100_bases GCACGGCCTTCTTTCCCCTGTTTTGTCTGCACACGGTCGCATCGCCGCCGTGTGCGGCGCGGGCGGCAGGCAGGCATGGC CACCACCCCGCGGGGTGTAT
Downstream 100 bases:
>100_bases TCTTTTACTGATTGTGTTTATGGGGGCAACTCATGCGTTTTGCCGGAAGAATGAATACTGTGCACCGCTCGTATATTCGC GAGATTCTTAAAGTTACCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MHDEAGQHMNQESIGIIAGSGQFPMLVARAARLEGHRVVMCGFQGHTDSALEHEADVWSMLHLGQLGRLIDFFVSAGVTR LCFAGAISKPRALDLRPDMRAAKVLFRLRSKGDDVLLRAVLAELESEGLVIVQAAELVPGLRGPEGVLTRRQPSAEEWQD IRYGWPVAMQIGALDIGQCLVVRRGMVVAVEGLEGTDATLRRGGELGGDGCVALKFVKPGQDERIDLPALGLATVRTLAQ GGYTCLCYQAGNTLFFDREESISLADKHGISIVGIGPALSAELTAAAE
Sequences:
>Translated_288_residues MHDEAGQHMNQESIGIIAGSGQFPMLVARAARLEGHRVVMCGFQGHTDSALEHEADVWSMLHLGQLGRLIDFFVSAGVTR LCFAGAISKPRALDLRPDMRAAKVLFRLRSKGDDVLLRAVLAELESEGLVIVQAAELVPGLRGPEGVLTRRQPSAEEWQD IRYGWPVAMQIGALDIGQCLVVRRGMVVAVEGLEGTDATLRRGGELGGDGCVALKFVKPGQDERIDLPALGLATVRTLAQ GGYTCLCYQAGNTLFFDREESISLADKHGISIVGIGPALSAELTAAAE >Mature_288_residues MHDEAGQHMNQESIGIIAGSGQFPMLVARAARLEGHRVVMCGFQGHTDSALEHEADVWSMLHLGQLGRLIDFFVSAGVTR LCFAGAISKPRALDLRPDMRAAKVLFRLRSKGDDVLLRAVLAELESEGLVIVQAAELVPGLRGPEGVLTRRQPSAEEWQD IRYGWPVAMQIGALDIGQCLVVRRGMVVAVEGLEGTDATLRRGGELGGDGCVALKFVKPGQDERIDLPALGLATVRTLAQ GGYTCLCYQAGNTLFFDREESISLADKHGISIVGIGPALSAELTAAAE
Specific function: Unknown
COG id: COG3494
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30824; Mature: 30824
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHDEAGQHMNQESIGIIAGSGQFPMLVARAARLEGHRVVMCGFQGHTDSALEHEADVWSM CCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHH LHLGQLGRLIDFFVSAGVTRLCFAGAISKPRALDLRPDMRAAKVLFRLRSKGDDVLLRAV HHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHCCCCHHHHHHH LAELESEGLVIVQAAELVPGLRGPEGVLTRRQPSAEEWQDIRYGWPVAMQIGALDIGQCL HHHHCCCCEEEEEEHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCHHHHH VVRRGMVVAVEGLEGTDATLRRGGELGGDGCVALKFVKPGQDERIDLPALGLATVRTLAQ HHHCCEEEEEECCCCCHHHHHCCCCCCCCCEEEEEEECCCCCCEECCCCHHHHHHHHHHC GGYTCLCYQAGNTLFFDREESISLADKHGISIVGIGPALSAELTAAAE CCCEEEEEECCCEEEEECCCCCCCHHHCCEEEEEECCCCCCCEEECCC >Mature Secondary Structure MHDEAGQHMNQESIGIIAGSGQFPMLVARAARLEGHRVVMCGFQGHTDSALEHEADVWSM CCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHH LHLGQLGRLIDFFVSAGVTRLCFAGAISKPRALDLRPDMRAAKVLFRLRSKGDDVLLRAV HHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHCCCCHHHHHHH LAELESEGLVIVQAAELVPGLRGPEGVLTRRQPSAEEWQDIRYGWPVAMQIGALDIGQCL HHHHCCCCEEEEEEHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCHHHHH VVRRGMVVAVEGLEGTDATLRRGGELGGDGCVALKFVKPGQDERIDLPALGLATVRTLAQ HHHCCEEEEEECCCCCHHHHHCCCCCCCCCEEEEEEECCCCCCEECCCCHHHHHHHHHHC GGYTCLCYQAGNTLFFDREESISLADKHGISIVGIGPALSAELTAAAE CCCEEEEEECCCEEEEECCCCCCCHHHCCEEEEEECCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA