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The map label for this gene is yhaM [C]

Identifier: 78355854

GI number: 78355854

Start: 826661

End: 827947

Strand: Reverse

Name: yhaM [C]

Synonym: Dde_0807

Alternate gene names: 78355854

Gene position: 827947-826661 (Counterclockwise)

Preceding gene: 78355855

Following gene: 78355851

Centisome position: 22.2

GC content: 61.85

Gene sequence:

>1287_bases
ATGCTCAAACCGGAATGGTCCCGATATATAGACCTGCTGCACAAGGAAGTTGTGCCGGCACTGGGCTGCACCGAGCCTGT
CGCGGTGGCGCTTGCAGCCGCACATGCCGCAGCAACTCTGGGCCGGACGCCCGACCGCATAGAAGTGAAGGTCAGCGGTA
ATCTGCTGAAAAACGGCATGGGTGTGGGTGTGCCCGGAACAGGCACCACCGGCATGAACATAGCTGCCGCCGTAGGTGCA
CTGGGCGGCGACCCGCAGCGCGGTCTTGAAGTGCTGGCCGGACTGACACCGGAGCAGGCCGAAGCAGGCAGGCAGATGGT
GGCAGAAGGCAGAGTGGACGTTTCCGTGGCTCAGGGCGCTCCGCTGCTGTACGCCGAAGTCACGGTCACCGGCGGCGGAC
ATACGGCCCGCAGCGTGCTGGTGCACGAACACTCGAACATCGTACGGCTGGAACGCGACGGCGAGACGGTCTTCTCCGTG
CCTGTGCAGGACCTGTCACAGGGCGGCGTGGAAGAAAAATGGCCTCTGACCATGGCGGCCATTCACGAATTCGCCACGCA
GGCACCGTATGATGCCATAGCCTTCATACTGGAAGCGGCACGGCTGAACGAAGCCATTGCCGTGGAAGGTCTGGCCAGGG
AATACGGCCTGAAAGTAGGCCGCACCATTGATGAAAACATACGCAAGCACCTGATGTCCGACGATGTCAGCACGCTGGCG
GTCAAACTGACGGCCGCCGCCTCCGACGCCCGCATGGCCGGTGTGTCATTGCCGGTCATGAGCAACTCGGGCAGCGGCAA
TCAGGGCATAACCTGCACCATGCCCGTGGTGGCTTTTGCAAAGCGTCTGGAATCAAGCGACGAAGAGCTTGCCCGCGCGC
TTATCATGAGTCACCTGACGTCCATTCACATGAAGCACCGCCTTGGCAGGCTTTCCGCACTGTGCGGAGCCACTGTGGCG
GCGGCGGCAGCCGGATGCGGCATAGTGCTGCTGATGGGCGGCGGTATGGAACAGGTGGACCGCACCATACGCAACATGGT
GGGCAACGTGGCCGGCATGATCTGCGACGGAGCCAAAACCGGATGCGCCATGAAAGTGGCTTCGGCGGTAAGCGCCGGCG
TGCAGTCCGCAATGCTTGCCATGGACGGCATAGGCATAGACCGCCGTGAAGGCATTGTGGAAGACGACATAGAGCTGTGC
ATCGCCAACCTTGCCCGACTGGGCAGTGACGGTATGCAGGAAGCCGACAGGGTGGTGCTGGACATCATGGTTTCCAAAAA
GCCCTGA

Upstream 100 bases:

>100_bases
CTCGAAGGCATATTCAACAGAAACGGAGAGCTTTCGGGGCACAAGCTATAGGCACGTTCCGCCGCATCTCCATGACAACG
CCATAGAAACGGATATATAT

Downstream 100 bases:

>100_bases
ATCTGACGCCACAGACCGGCAACGGGCCGGAACAGCGTTACTTCCGCCATATGAAAGGCGCAGCCCCCATGCTGCGCCTT
TCTGCATGGTTGCCCGGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 428

Protein sequence:

>428_residues
MLKPEWSRYIDLLHKEVVPALGCTEPVAVALAAAHAAATLGRTPDRIEVKVSGNLLKNGMGVGVPGTGTTGMNIAAAVGA
LGGDPQRGLEVLAGLTPEQAEAGRQMVAEGRVDVSVAQGAPLLYAEVTVTGGGHTARSVLVHEHSNIVRLERDGETVFSV
PVQDLSQGGVEEKWPLTMAAIHEFATQAPYDAIAFILEAARLNEAIAVEGLAREYGLKVGRTIDENIRKHLMSDDVSTLA
VKLTAAASDARMAGVSLPVMSNSGSGNQGITCTMPVVAFAKRLESSDEELARALIMSHLTSIHMKHRLGRLSALCGATVA
AAAAGCGIVLLMGGGMEQVDRTIRNMVGNVAGMICDGAKTGCAMKVASAVSAGVQSAMLAMDGIGIDRREGIVEDDIELC
IANLARLGSDGMQEADRVVLDIMVSKKP

Sequences:

>Translated_428_residues
MLKPEWSRYIDLLHKEVVPALGCTEPVAVALAAAHAAATLGRTPDRIEVKVSGNLLKNGMGVGVPGTGTTGMNIAAAVGA
LGGDPQRGLEVLAGLTPEQAEAGRQMVAEGRVDVSVAQGAPLLYAEVTVTGGGHTARSVLVHEHSNIVRLERDGETVFSV
PVQDLSQGGVEEKWPLTMAAIHEFATQAPYDAIAFILEAARLNEAIAVEGLAREYGLKVGRTIDENIRKHLMSDDVSTLA
VKLTAAASDARMAGVSLPVMSNSGSGNQGITCTMPVVAFAKRLESSDEELARALIMSHLTSIHMKHRLGRLSALCGATVA
AAAAGCGIVLLMGGGMEQVDRTIRNMVGNVAGMICDGAKTGCAMKVASAVSAGVQSAMLAMDGIGIDRREGIVEDDIELC
IANLARLGSDGMQEADRVVLDIMVSKKP
>Mature_428_residues
MLKPEWSRYIDLLHKEVVPALGCTEPVAVALAAAHAAATLGRTPDRIEVKVSGNLLKNGMGVGVPGTGTTGMNIAAAVGA
LGGDPQRGLEVLAGLTPEQAEAGRQMVAEGRVDVSVAQGAPLLYAEVTVTGGGHTARSVLVHEHSNIVRLERDGETVFSV
PVQDLSQGGVEEKWPLTMAAIHEFATQAPYDAIAFILEAARLNEAIAVEGLAREYGLKVGRTIDENIRKHLMSDDVSTLA
VKLTAAASDARMAGVSLPVMSNSGSGNQGITCTMPVVAFAKRLESSDEELARALIMSHLTSIHMKHRLGRLSALCGATVA
AAAAGCGIVLLMGGGMEQVDRTIRNMVGNVAGMICDGAKTGCAMKVASAVSAGVQSAMLAMDGIGIDRREGIVEDDIELC
IANLARLGSDGMQEADRVVLDIMVSKKP

Specific function: Unknown

COG id: COG3681

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Integral membrane protein (Potential) [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0597 family

Homologues:

Organism=Escherichia coli, GI48994923, Length=432, Percent_Identity=45.8333333333333, Blast_Score=334, Evalue=7e-93,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y807_DESDG (Q314N8)

Other databases:

- EMBL:   CP000112
- RefSeq:   YP_387303.1
- STRING:   Q314N8
- GeneID:   3755724
- GenomeReviews:   CP000112_GR
- KEGG:   dde:Dde_0807
- NMPDR:   fig|207559.3.peg.135
- eggNOG:   COG3681
- HOGENOM:   HBG296671
- OMA:   PVMSNSG
- ProtClustDB:   CLSK2464824
- BioCyc:   DDES207559:DDE_0807-MONOMER
- HAMAP:   MF_01845
- InterPro:   IPR005130
- InterPro:   IPR021144
- PIRSF:   PIRSF006054

Pfam domain/function: PF03313 SDH_alpha

EC number: NA

Molecular weight: Translated: 44488; Mature: 44488

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKPEWSRYIDLLHKEVVPALGCTEPVAVALAAAHAAATLGRTPDRIEVKVSGNLLKNGM
CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHCCC
GVGVPGTGTTGMNIAAAVGALGGDPQRGLEVLAGLTPEQAEAGRQMVAEGRVDVSVAQGA
CCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEECCCC
PLLYAEVTVTGGGHTARSVLVHEHSNIVRLERDGETVFSVPVQDLSQGGVEEKWPLTMAA
CEEEEEEEEECCCHHHHHEEEECCCCEEEEECCCCEEEECCHHHHHCCCCCCCCCHHHHH
IHEFATQAPYDAIAFILEAARLNEAIAVEGLAREYGLKVGRTIDENIRKHLMSDDVSTLA
HHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHCCHHHHHHHHHHHCCCHHHHE
VKLTAAASDARMAGVSLPVMSNSGSGNQGITCTMPVVAFAKRLESSDEELARALIMSHLT
EEEEECCCCCHHCCEEEEEEECCCCCCCCEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHH
SIHMKHRLGRLSALCGATVAAAAAGCGIVLLMGGGMEQVDRTIRNMVGNVAGMICDGAKT
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHEECCCCC
GCAMKVASAVSAGVQSAMLAMDGIGIDRREGIVEDDIELCIANLARLGSDGMQEADRVVL
CHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH
DIMVSKKP
HHEECCCC
>Mature Secondary Structure
MLKPEWSRYIDLLHKEVVPALGCTEPVAVALAAAHAAATLGRTPDRIEVKVSGNLLKNGM
CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHCCC
GVGVPGTGTTGMNIAAAVGALGGDPQRGLEVLAGLTPEQAEAGRQMVAEGRVDVSVAQGA
CCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEECCCC
PLLYAEVTVTGGGHTARSVLVHEHSNIVRLERDGETVFSVPVQDLSQGGVEEKWPLTMAA
CEEEEEEEEECCCHHHHHEEEECCCCEEEEECCCCEEEECCHHHHHCCCCCCCCCHHHHH
IHEFATQAPYDAIAFILEAARLNEAIAVEGLAREYGLKVGRTIDENIRKHLMSDDVSTLA
HHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHCCHHHHHHHHHHHCCCHHHHE
VKLTAAASDARMAGVSLPVMSNSGSGNQGITCTMPVVAFAKRLESSDEELARALIMSHLT
EEEEECCCCCHHCCEEEEEEECCCCCCCCEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHH
SIHMKHRLGRLSALCGATVAAAAAGCGIVLLMGGGMEQVDRTIRNMVGNVAGMICDGAKT
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHEECCCCC
GCAMKVASAVSAGVQSAMLAMDGIGIDRREGIVEDDIELCIANLARLGSDGMQEADRVVL
CHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH
DIMVSKKP
HHEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA