Click here to switch to the map view.

The map label for this gene is 78224443

Identifier: 78224443

GI number: 78224443

Start: 3661619

End: 3662062

Strand: Direct

Name: 78224443

Synonym: Gmet_3252

Alternate gene names: NA

Gene position: 3661619-3662062 (Clockwise)

Preceding gene: 78224442

Following gene: 78224444

Centisome position: 91.6

GC content: 45.5

Gene sequence:

>444_bases
GTGTCCACCGGGAGACGGTGGTGCTGTAATTTTATGGGAATAACACGGAGAGACGGAGAAACGGAGAAAAAGCTCTTAGA
ATCAGAATTGACCGACCTGATTATTGGCAAAGCCATTGTTGTCCACAGTACGCTCGGTCCAGGGCTTCTCGAATCAGTTT
ATGAAGCCTGCCTTGCCTATGAATTATCAGAAGCCGGCTTACACGTAGAACGTCAAAAGGTTTTGCCGGTACGATACAAG
AACATCAACCTTGATGATGGACTCCGCATGGATCTGGTTGTCGAAAACAGGATCATTCTCGAATTGAAGTGCGTTGACAC
CATTCTCCCGGTCCACGAAGCACAGCTTCAGACCTATTTGAAGCTTTCAGGATTGAGAGTTGGGCTTCTCATGAACTTTT
ATACGAAATACCTGAAAGAGGGAATCAAACGGATAATATTCTGA

Upstream 100 bases:

>100_bases
GCCGCCAAGGGAACCGACAACCTCATGCCGCCGATCCTCAACGCTGTCAAGGCCTACGCCACCCTCGGCGAAATCGCCAA
CGTCCTCCGCGACGTCTTCG

Downstream 100 bases:

>100_bases
TTTTCTCCGTGCTCTCCGTATCTCCGTGTTATTCAGAAAGGTTTTCCCATGCTCACCAAAATCAACCATATCGGCATCGC
CGTCCAATCCCTCGCCGACG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MSTGRRWCCNFMGITRRDGETEKKLLESELTDLIIGKAIVVHSTLGPGLLESVYEACLAYELSEAGLHVERQKVLPVRYK
NINLDDGLRMDLVVENRIILELKCVDTILPVHEAQLQTYLKLSGLRVGLLMNFYTKYLKEGIKRIIF

Sequences:

>Translated_147_residues
MSTGRRWCCNFMGITRRDGETEKKLLESELTDLIIGKAIVVHSTLGPGLLESVYEACLAYELSEAGLHVERQKVLPVRYK
NINLDDGLRMDLVVENRIILELKCVDTILPVHEAQLQTYLKLSGLRVGLLMNFYTKYLKEGIKRIIF
>Mature_146_residues
STGRRWCCNFMGITRRDGETEKKLLESELTDLIIGKAIVVHSTLGPGLLESVYEACLAYELSEAGLHVERQKVLPVRYKN
INLDDGLRMDLVVENRIILELKCVDTILPVHEAQLQTYLKLSGLRVGLLMNFYTKYLKEGIKRIIF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16798; Mature: 16667

Theoretical pI: Translated: 7.95; Mature: 7.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTGRRWCCNFMGITRRDGETEKKLLESELTDLIIGKAIVVHSTLGPGLLESVYEACLAY
CCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHH
ELSEAGLHVERQKVLPVRYKNINLDDGLRMDLVVENRIILELKCVDTILPVHEAQLQTYL
HHHHCCCCCHHHCCCEEEECCCCCCCCCEEEEEECCEEEEEEEHHHHHHHHHHHHHHHHH
KLSGLRVGLLMNFYTKYLKEGIKRIIF
HHCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
STGRRWCCNFMGITRRDGETEKKLLESELTDLIIGKAIVVHSTLGPGLLESVYEACLAY
CCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHH
ELSEAGLHVERQKVLPVRYKNINLDDGLRMDLVVENRIILELKCVDTILPVHEAQLQTYL
HHHHCCCCCHHHCCCEEEECCCCCCCCCEEEEEECCEEEEEEEHHHHHHHHHHHHHHHHH
KLSGLRVGLLMNFYTKYLKEGIKRIIF
HHCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA