Click here to switch to the map view.

The map label for this gene is dksA [H]

Identifier: 78224395

GI number: 78224395

Start: 3604335

End: 3604754

Strand: Reverse

Name: dksA [H]

Synonym: Gmet_3204

Alternate gene names: 78224395

Gene position: 3604754-3604335 (Counterclockwise)

Preceding gene: 78224396

Following gene: 78224373

Centisome position: 90.18

GC content: 61.43

Gene sequence:

>420_bases
ATGGTTGAAAAACAAGACGAAATGAAGGCTCTTCTCCTGAAGGCAAAGGAGGAGATCCTGGCAGGGATAAACAAGGCGCT
GAAGTCGGGGTCCGAGACGAACACCGGCGAGCCCACGGGCGACATCTACGACCAGGCGTCCAGCGAGCGGGACCGGGAAC
TGGGGCTTCTCCTCAACGACCGGGAGCGGGACAAGCTGCGCCAGATCGATGAAGCTCTGCTCCGCATCGCCGATGGCGAG
TACGGCATTTGCGAGGAGTGCGAGGAGGAAATCCCCCTCGGGCGCCTCAAGGTGATGCCCTTTGCCCGCTTCTGTGTCCG
CTGCCAGTCGGACATGGAAAAACTCCAGGCCCAGACCCGGCGCGTGGAGGAAGAACGGTCCTACCGCGAGGTTTCCTTCG
GCGAGGAAGAGGAAGGGTAG

Upstream 100 bases:

>100_bases
TGTTGAAGAGTAATGGGCCTGAAATTTGCTTGACAATCAAAAGTTTTTGAGTAACATTTCGAGACCTTTTGGCCCACCCT
ATAACGATGGAGTGATGTAA

Downstream 100 bases:

>100_bases
CAGCCGACCAACAAAAAGGTTAACGGAAACGGAAAAAGGGCGCCACGTGATGCGGCGCCCTTTTTTTGTCAAATGAAAGA
ATTCTTGTCAAAAAACTGTC

Product: TraR/DksA family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MVEKQDEMKALLLKAKEEILAGINKALKSGSETNTGEPTGDIYDQASSERDRELGLLLNDRERDKLRQIDEALLRIADGE
YGICEECEEEIPLGRLKVMPFARFCVRCQSDMEKLQAQTRRVEEERSYREVSFGEEEEG

Sequences:

>Translated_139_residues
MVEKQDEMKALLLKAKEEILAGINKALKSGSETNTGEPTGDIYDQASSERDRELGLLLNDRERDKLRQIDEALLRIADGE
YGICEECEEEIPLGRLKVMPFARFCVRCQSDMEKLQAQTRRVEEERSYREVSFGEEEEG
>Mature_139_residues
MVEKQDEMKALLLKAKEEILAGINKALKSGSETNTGEPTGDIYDQASSERDRELGLLLNDRERDKLRQIDEALLRIADGE
YGICEECEEEIPLGRLKVMPFARFCVRCQSDMEKLQAQTRRVEEERSYREVSFGEEEEG

Specific function: Dosage-Dependent Suppressor Of A Dnak Deletion Mutation. It Suppressed Not Only The Temperature-Sensitive Growth But Also The Filamentous Phenotype Of The Dnak Deletion Strain, While The Defect Of Lambda Growth Is Not Suppressed. [C]

COG id: COG1734

COG function: function code T; DnaK suppressor protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 dksA C4-type zinc finger [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012784
- InterPro:   IPR000962
- InterPro:   IPR020458 [H]

Pfam domain/function: PF01258 zf-dskA_traR [H]

EC number: NA

Molecular weight: Translated: 15946; Mature: 15946

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: PS01102 ZF_DKSA_1 ; PS51128 ZF_DKSA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEKQDEMKALLLKAKEEILAGINKALKSGSETNTGEPTGDIYDQASSERDRELGLLLND
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCHHHHHHCCCCCC
RERDKLRQIDEALLRIADGEYGICEECEEEIPLGRLKVMPFARFCVRCQSDMEKLQAQTR
CHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RVEEERSYREVSFGEEEEG
HHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MVEKQDEMKALLLKAKEEILAGINKALKSGSETNTGEPTGDIYDQASSERDRELGLLLND
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCHHHHHHCCCCCC
RERDKLRQIDEALLRIADGEYGICEECEEEIPLGRLKVMPFARFCVRCQSDMEKLQAQTR
CHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RVEEERSYREVSFGEEEEG
HHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9555902 [H]