Click here to switch to the map view.

The map label for this gene is 78224368

Identifier: 78224368

GI number: 78224368

Start: 3575507

End: 3577711

Strand: Reverse

Name: 78224368

Synonym: Gmet_3177

Alternate gene names: NA

Gene position: 3577711-3575507 (Counterclockwise)

Preceding gene: 78224369

Following gene: 78224367

Centisome position: 89.5

GC content: 65.9

Gene sequence:

>2205_bases
GTGAGCGCCCCCCTCTCCGTCATATTCGTATGGCACATGCACCAGCCCTACTACAAGGATCCGGTGAAGGGGGAGTACGC
CCTTCCCTGGACCTACCTCCACGCCGTCAAGGACTACTTCGACATGGCGGCCATCGTGGACGACACCCCCAATGCCCGGG
CGGTCTTCAACCTGGTGCCGTCGCTCCTGGACCAGATCATCGACTACGCCGGCGGCACGGCCGTGGACCCTTGGCTTGTC
CGGGGGCGGATGGCCCCGGCCGACATGGCCGAGGAGGACCGGCTCTTCGCCCTGGAGAACTACTTCTCCGCCAACCGCCA
GCGGCTCATCGAGCCGAACCGCCGCTATCTGGAGCTCCTCCATCTTGCAGGCGACGGGACCCGGGTGAAGAGCCGGGAAC
GGCACCGCCACTTCAGCCACCAGGACCTCCTGGACCTCCAGGTCTGGTTCTTCCTGGCCTGGACCGGCGAGGCGGCCCGC
CGCCGCTACCCCGAGCTCAAGGAGCTGGCGCGGAAGGGGCGCAACTTCACCGAGGATGACAAGGCGCTCCTCTTCACCCG
CCACGCCGACATCCTCAACGGGATCATTCCCCTCTACAAAAAGCTCCACGATGAGGGGAAGGTGGAACTGGCCGTCTCCC
CTTACTACCACCCGATTCTTCCCCTTCTCTGCGACATGAAGGCGGCCGCCATCGCCATGCCCCGGGCGAACCTCCCGGCA
ACCCGCTTTCGCCATCCGGAGGACGCCCGGAGCCAGGTGAGTCGCGGCATCGCCCGGTTCCAGGAGGTGTTCGGCTTCAC
CCCGGTGGGCATGTGGCCGTCGGAGGGGTCGGTGAGCGACGAGGCCCTTGCCATCATTGCCGGCTGCGGCATCAAGTGGA
TCGCCACCGACGAGGAGATCCTCGCCCGCACCCTTCCCGGGGGACTCGGTCCCGACCGGGAGGCCCTCTACCATCCCTAC
ACCTTCCGCCACCGCACCCGGGAGCTGAAGGCCTTTTTCCGTGACCATCTCCTCTCGGACCTGATCGGCTTCACCTATTC
CTCCTGGGAACCCCGCCGGGCGGTGGAGGATTTCGTGGGGAGACTCCGGGCAATACGGGAGAGCACTCCCGACGCCCGGG
TAGTGCCGGTGATCCTGGACGGCGAGAACGCCTGGGAGTACTACCCCGACAACGGCTACGACTTCCTTCGGGGTCTCTAC
AGCGTCACCGCCGCCGCGCCGGGAATCGAATGCACCACCTGCTCCGGGTTCCTTGCCCGGGAGCCGGAGCGGAGGGTCAT
CGAACACATCCACCCCGGCTCCTGGATCAACGCCGACTACGGCATCTGGGTCGGCCATCCGGAGGAGAACCAGGGGTGGG
ACTACCTGGAGCGGGCCCGGGAGGCGGCGGTCACCGCCAGCCCGCTGGTGGCCGACCTCATGGCCGTGGGTGACCAGTGG
GAGGGGGAGGGGACCGACGAGGAGCGCGTTGCCCGGCTCGTCTGCACCTCCCTCTACGCCGCCGAGGGGAGCGACTGGTT
CTGGTGGTACGGCGATGATCACTTCTCCTCCCACAGCGACCGCTTTGACCGCCTCTTCCGCAAGCACCTCATGAACGTCT
ACCGCCTCCTCGGCCTCGACATCCCCCGGGAGCTCTACGAGCCCATCAAGAAGCTTACTCCGGCGGGGCTCGTGCGGGAA
CCGGCGGCCCTTATCACCCCCACCATCAACGGACGGGTGGACGACTATTTCGAGTGGCTGGCGGCGGGGCTCGTGGACCT
CACCAAGCAGGCATCGGCCATGCACGCCGCTGAAAGCCTTCTCCAGTCCATTTTTTACGGCTATGACCGGGATAACCTCT
ATATCCGCCTCGACGGCCCAACACCGTTGAACCTCGCCATTCAGGAGGGTGATGCCCTTCAGCTCCACCTGGTCACCGGG
AGCGAGTATCGTCTCGAAATAACTCCGTCCGATCGGTCTGGTGAGCTCATGGTGAAAGGGACCAAGGGGTGGAAGAAGGC
CAAGGGGCGCTGCTGCTGGGAGATCGGCCATGTCTGCGAGGCGGCTGTTCCCCTGGGGCCCCTGGCGCTCAAGCCGAGGG
GGAAGCTCTTCGCTTTCGTGACCCTCGTCCGCGGAGGCGAAGAGTTTGGTCGCTGGCCCGCCGATTCGCCCCTCGTTCTG
AGCTATGCGGGGCCGGAGCTGGATGCGGAGAACTGGCTCATATGA

Upstream 100 bases:

>100_bases
CCTACGTTCACATCGTGGCCGAGGCCCGGGATGCCAAGACGGCCCAGAAGCTCCTCGATGAGTACAAGAAAAAGGTCGAG
GGGTGGAAACGGGAACTGCA

Downstream 100 bases:

>100_bases
AACTGGAGGAACAATGTCCGAACTGAGATGGGACCCCCTCAAGCAGCACTGGGTGATTATCGCCACCGACCGGGGGCGCC
GGCCGCGGGATTTCCTCGTG

Product: glycoside hydrolase family protein

Products: NA

Alternate protein names: Glycoside Hydrolase Family Protein; Amylopullulanase; Glycoside Hydrolase; Glycosy Hydrolase Family Protein; Pullulanase; Glycosyl Hydrolase Family; Family; Alpha-Amylase/Alpha-Mannosidase; Membrane Bound Alpha-Amylase; Pullulanase Glycoside Hydrolase Family; Alpha-Dextran Endo-1 6-Alpha-Glucosidase; Alpha-Mannosidase; Amylopullulanase Related Protein

Number of amino acids: Translated: 734; Mature: 733

Protein sequence:

>734_residues
MSAPLSVIFVWHMHQPYYKDPVKGEYALPWTYLHAVKDYFDMAAIVDDTPNARAVFNLVPSLLDQIIDYAGGTAVDPWLV
RGRMAPADMAEEDRLFALENYFSANRQRLIEPNRRYLELLHLAGDGTRVKSRERHRHFSHQDLLDLQVWFFLAWTGEAAR
RRYPELKELARKGRNFTEDDKALLFTRHADILNGIIPLYKKLHDEGKVELAVSPYYHPILPLLCDMKAAAIAMPRANLPA
TRFRHPEDARSQVSRGIARFQEVFGFTPVGMWPSEGSVSDEALAIIAGCGIKWIATDEEILARTLPGGLGPDREALYHPY
TFRHRTRELKAFFRDHLLSDLIGFTYSSWEPRRAVEDFVGRLRAIRESTPDARVVPVILDGENAWEYYPDNGYDFLRGLY
SVTAAAPGIECTTCSGFLAREPERRVIEHIHPGSWINADYGIWVGHPEENQGWDYLERAREAAVTASPLVADLMAVGDQW
EGEGTDEERVARLVCTSLYAAEGSDWFWWYGDDHFSSHSDRFDRLFRKHLMNVYRLLGLDIPRELYEPIKKLTPAGLVRE
PAALITPTINGRVDDYFEWLAAGLVDLTKQASAMHAAESLLQSIFYGYDRDNLYIRLDGPTPLNLAIQEGDALQLHLVTG
SEYRLEITPSDRSGELMVKGTKGWKKAKGRCCWEIGHVCEAAVPLGPLALKPRGKLFAFVTLVRGGEEFGRWPADSPLVL
SYAGPELDAENWLI

Sequences:

>Translated_734_residues
MSAPLSVIFVWHMHQPYYKDPVKGEYALPWTYLHAVKDYFDMAAIVDDTPNARAVFNLVPSLLDQIIDYAGGTAVDPWLV
RGRMAPADMAEEDRLFALENYFSANRQRLIEPNRRYLELLHLAGDGTRVKSRERHRHFSHQDLLDLQVWFFLAWTGEAAR
RRYPELKELARKGRNFTEDDKALLFTRHADILNGIIPLYKKLHDEGKVELAVSPYYHPILPLLCDMKAAAIAMPRANLPA
TRFRHPEDARSQVSRGIARFQEVFGFTPVGMWPSEGSVSDEALAIIAGCGIKWIATDEEILARTLPGGLGPDREALYHPY
TFRHRTRELKAFFRDHLLSDLIGFTYSSWEPRRAVEDFVGRLRAIRESTPDARVVPVILDGENAWEYYPDNGYDFLRGLY
SVTAAAPGIECTTCSGFLAREPERRVIEHIHPGSWINADYGIWVGHPEENQGWDYLERAREAAVTASPLVADLMAVGDQW
EGEGTDEERVARLVCTSLYAAEGSDWFWWYGDDHFSSHSDRFDRLFRKHLMNVYRLLGLDIPRELYEPIKKLTPAGLVRE
PAALITPTINGRVDDYFEWLAAGLVDLTKQASAMHAAESLLQSIFYGYDRDNLYIRLDGPTPLNLAIQEGDALQLHLVTG
SEYRLEITPSDRSGELMVKGTKGWKKAKGRCCWEIGHVCEAAVPLGPLALKPRGKLFAFVTLVRGGEEFGRWPADSPLVL
SYAGPELDAENWLI
>Mature_733_residues
SAPLSVIFVWHMHQPYYKDPVKGEYALPWTYLHAVKDYFDMAAIVDDTPNARAVFNLVPSLLDQIIDYAGGTAVDPWLVR
GRMAPADMAEEDRLFALENYFSANRQRLIEPNRRYLELLHLAGDGTRVKSRERHRHFSHQDLLDLQVWFFLAWTGEAARR
RYPELKELARKGRNFTEDDKALLFTRHADILNGIIPLYKKLHDEGKVELAVSPYYHPILPLLCDMKAAAIAMPRANLPAT
RFRHPEDARSQVSRGIARFQEVFGFTPVGMWPSEGSVSDEALAIIAGCGIKWIATDEEILARTLPGGLGPDREALYHPYT
FRHRTRELKAFFRDHLLSDLIGFTYSSWEPRRAVEDFVGRLRAIRESTPDARVVPVILDGENAWEYYPDNGYDFLRGLYS
VTAAAPGIECTTCSGFLAREPERRVIEHIHPGSWINADYGIWVGHPEENQGWDYLERAREAAVTASPLVADLMAVGDQWE
GEGTDEERVARLVCTSLYAAEGSDWFWWYGDDHFSSHSDRFDRLFRKHLMNVYRLLGLDIPRELYEPIKKLTPAGLVREP
AALITPTINGRVDDYFEWLAAGLVDLTKQASAMHAAESLLQSIFYGYDRDNLYIRLDGPTPLNLAIQEGDALQLHLVTGS
EYRLEITPSDRSGELMVKGTKGWKKAKGRCCWEIGHVCEAAVPLGPLALKPRGKLFAFVTLVRGGEEFGRWPADSPLVLS
YAGPELDAENWLI

Specific function: Unknown

COG id: COG1449

COG function: function code G; Alpha-amylase/alpha-mannosidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 83275; Mature: 83144

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAPLSVIFVWHMHQPYYKDPVKGEYALPWTYLHAVKDYFDMAAIVDDTPNARAVFNLVP
CCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
SLLDQIIDYAGGTAVDPWLVRGRMAPADMAEEDRLFALENYFSANRQRLIEPNRRYLELL
HHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCEEHHHHHHHHCHHHHCCCCHHHHHHH
HLAGDGTRVKSRERHRHFSHQDLLDLQVWFFLAWTGEAARRRYPELKELARKGRNFTEDD
HHCCCCCCCCCHHHHHCCCHHHHHHHEEEEEEEECCHHHHHCCHHHHHHHHHCCCCCCCC
KALLFTRHADILNGIIPLYKKLHDEGKVELAVSPYYHPILPLLCDMKAAAIAMPRANLPA
CEEEEEEHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCHHHHHCCCCCCCCH
TRFRHPEDARSQVSRGIARFQEVFGFTPVGMWPSEGSVSDEALAIIAGCGIKWIATDEEI
HHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHEEEEECCCEEEEECCHHH
LARTLPGGLGPDREALYHPYTFRHRTRELKAFFRDHLLSDLIGFTYSSWEPRRAVEDFVG
HHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
RLRAIRESTPDARVVPVILDGENAWEYYPDNGYDFLRGLYSVTAAAPGIECTTCSGFLAR
HHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCHHHC
EPERRVIEHIHPGSWINADYGIWVGHPEENQGWDYLERAREAAVTASPLVADLMAVGDQW
CCHHHHHHHCCCCCEECCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
EGEGTDEERVARLVCTSLYAAEGSDWFWWYGDDHFSSHSDRFDRLFRKHLMNVYRLLGLD
CCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
IPRELYEPIKKLTPAGLVREPAALITPTINGRVDDYFEWLAAGLVDLTKQASAMHAAESL
CCHHHHHHHHHCCCCCHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQSIFYGYDRDNLYIRLDGPTPLNLAIQEGDALQLHLVTGSEYRLEITPSDRSGELMVKG
HHHHHCCCCCCCEEEEECCCCCEEEEEECCCEEEEEEEECCCEEEEECCCCCCCCEEEEC
TKGWKKAKGRCCWEIGHVCEAAVPLGPLALKPRGKLFAFVTLVRGGEEFGRWPADSPLVL
CCCHHHHCCCCHHHHHHHHHHHCCCCCEEECCCCCEEEEHHHHHCCHHHCCCCCCCCEEE
SYAGPELDAENWLI
EECCCCCCCCCCCC
>Mature Secondary Structure 
SAPLSVIFVWHMHQPYYKDPVKGEYALPWTYLHAVKDYFDMAAIVDDTPNARAVFNLVP
CCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
SLLDQIIDYAGGTAVDPWLVRGRMAPADMAEEDRLFALENYFSANRQRLIEPNRRYLELL
HHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCEEHHHHHHHHCHHHHCCCCHHHHHHH
HLAGDGTRVKSRERHRHFSHQDLLDLQVWFFLAWTGEAARRRYPELKELARKGRNFTEDD
HHCCCCCCCCCHHHHHCCCHHHHHHHEEEEEEEECCHHHHHCCHHHHHHHHHCCCCCCCC
KALLFTRHADILNGIIPLYKKLHDEGKVELAVSPYYHPILPLLCDMKAAAIAMPRANLPA
CEEEEEEHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCHHHHHCCCCCCCCH
TRFRHPEDARSQVSRGIARFQEVFGFTPVGMWPSEGSVSDEALAIIAGCGIKWIATDEEI
HHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHEEEEECCCEEEEECCHHH
LARTLPGGLGPDREALYHPYTFRHRTRELKAFFRDHLLSDLIGFTYSSWEPRRAVEDFVG
HHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
RLRAIRESTPDARVVPVILDGENAWEYYPDNGYDFLRGLYSVTAAAPGIECTTCSGFLAR
HHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCHHHC
EPERRVIEHIHPGSWINADYGIWVGHPEENQGWDYLERAREAAVTASPLVADLMAVGDQW
CCHHHHHHHCCCCCEECCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
EGEGTDEERVARLVCTSLYAAEGSDWFWWYGDDHFSSHSDRFDRLFRKHLMNVYRLLGLD
CCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
IPRELYEPIKKLTPAGLVREPAALITPTINGRVDDYFEWLAAGLVDLTKQASAMHAAESL
CCHHHHHHHHHCCCCCHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQSIFYGYDRDNLYIRLDGPTPLNLAIQEGDALQLHLVTGSEYRLEITPSDRSGELMVKG
HHHHHCCCCCCCEEEEECCCCCEEEEEECCCEEEEEEEECCCEEEEECCCCCCCCEEEEC
TKGWKKAKGRCCWEIGHVCEAAVPLGPLALKPRGKLFAFVTLVRGGEEFGRWPADSPLVL
CCCHHHHCCCCHHHHHHHHHHHCCCCCEEECCCCCEEEEHHHHHCCHHHCCCCCCCCEEE
SYAGPELDAENWLI
EECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA