| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is metX
Identifier: 78223979
GI number: 78223979
Start: 3145778
End: 3146887
Strand: Direct
Name: metX
Synonym: Gmet_2783
Alternate gene names: 78223979
Gene position: 3145778-3146887 (Clockwise)
Preceding gene: 78223978
Following gene: 78223980
Centisome position: 78.7
GC content: 65.05
Gene sequence:
>1110_bases ATGTCCGTCGGCATCGTACAGGAACAATCAGTAACCTTCGACACGGAACTCCGGCTGGAGAGCGGCCGCATTCTCGGCCC CATCACCCTCGCCTACGAGACCTACGGCGAGCTGAACGCCGACCGCTCCAACGCGATCCTGGTGGCCCACGCCTGGACCG GAAACGCCCATCTGGCGGGGAAAAACAGCGAGGAGGACACAAAGCCGGGATGGTGGGACGCCATCGTCGGCCCCGGCCGG CTCCTGGACACCGACCGGTGCTTCGTCATCTGCTCCAACGTCATCGGCTCCTGCTACGGCTCCACCGGCCCCGCCTCCAT CAACCCGAAAACCGGCAAGCGCTACAACCTCACCTTTCCCGTCATCACCGTCCGCGACATGGTCAGGGCCCAGGCCCTCC TCCTCGACCACCTGGGAATCGACCGGCTCCTCACCGTCCTCGGCGGGAGCATGGGGGGGATGCAGGCCCTGGAGTGGGCC ACCCAGTTCCCGGACCGGATCCGCTCCGCCATCGCCCTGGCCACCACGAGCCGCCCGTCGCCCCAGGCCATTTCCCTCAA CGCCGTTGCCCGCTGGGCCATCTTCAACGACCCCACGTGGAAGAAGGGGGAATACCGCAAGAACCCCAAGGACGGCCTGG CCCTGGCCCGGGGGATCGGCCACATCACCTTTCTCTCCGACGAGTCCATGTGGCAGAAGTTCGGCCGCCGCTTCAACGCC CGGGACGGCCTCTTCGACTTCTTCGGCCAGTTCGAGGTGGAGCGCTACCTCTCCTACAACGGCTACAACTTCGTGGACCG CTTCGACACCAACTCCTTCCTCTACCTGGCCAAGGCCCTGGACCTCTACGACACGGCCTGGGGGTACGAATCCCTGGAGG AGGCGTTTTCCCGGGTAAAGGCGCCGATCCAGTTCTTCGCCTTCACCTCCGACTGGCTCTACCCCCCCTACCAGACCGAG GAGATGGCGACCATCCTCCGCTCCCTCGGCAAGCCGGTCGAATACCACCTGATCGAATCGGCCTACGGCCACGACGCCTT CCTCCTGGAACACGAGACCTTCGCGCCGATGGTGCGGGAATTCCTCGACAAGGTGGAACGTTCGGAGTAG
Upstream 100 bases:
>100_bases GAGAACGGCGCTTGACGATAGCCACAACTGTCAACAAAGCCCCTTCTCGCCACCGCGGGAAGGGGCTTTTGTTTCCGAAC CATTTATTCAGGATTGACGC
Downstream 100 bases:
>100_bases CCTCGGGTGAACATTGCGTTGCAGTGATGCACTGCCGGGAGGTGAACGATGGCGAGGAAGATCTTCATAGCGGCCACGGG ACAGAACTGCGGCAAGACCA
Product: homoserine O-acetyltransferase
Products: NA
Alternate protein names: Homoserine O-trans-acetylase; HTA; Homoserine transacetylase
Number of amino acids: Translated: 369; Mature: 368
Protein sequence:
>369_residues MSVGIVQEQSVTFDTELRLESGRILGPITLAYETYGELNADRSNAILVAHAWTGNAHLAGKNSEEDTKPGWWDAIVGPGR LLDTDRCFVICSNVIGSCYGSTGPASINPKTGKRYNLTFPVITVRDMVRAQALLLDHLGIDRLLTVLGGSMGGMQALEWA TQFPDRIRSAIALATTSRPSPQAISLNAVARWAIFNDPTWKKGEYRKNPKDGLALARGIGHITFLSDESMWQKFGRRFNA RDGLFDFFGQFEVERYLSYNGYNFVDRFDTNSFLYLAKALDLYDTAWGYESLEEAFSRVKAPIQFFAFTSDWLYPPYQTE EMATILRSLGKPVEYHLIESAYGHDAFLLEHETFAPMVREFLDKVERSE
Sequences:
>Translated_369_residues MSVGIVQEQSVTFDTELRLESGRILGPITLAYETYGELNADRSNAILVAHAWTGNAHLAGKNSEEDTKPGWWDAIVGPGR LLDTDRCFVICSNVIGSCYGSTGPASINPKTGKRYNLTFPVITVRDMVRAQALLLDHLGIDRLLTVLGGSMGGMQALEWA TQFPDRIRSAIALATTSRPSPQAISLNAVARWAIFNDPTWKKGEYRKNPKDGLALARGIGHITFLSDESMWQKFGRRFNA RDGLFDFFGQFEVERYLSYNGYNFVDRFDTNSFLYLAKALDLYDTAWGYESLEEAFSRVKAPIQFFAFTSDWLYPPYQTE EMATILRSLGKPVEYHLIESAYGHDAFLLEHETFAPMVREFLDKVERSE >Mature_368_residues SVGIVQEQSVTFDTELRLESGRILGPITLAYETYGELNADRSNAILVAHAWTGNAHLAGKNSEEDTKPGWWDAIVGPGRL LDTDRCFVICSNVIGSCYGSTGPASINPKTGKRYNLTFPVITVRDMVRAQALLLDHLGIDRLLTVLGGSMGGMQALEWAT QFPDRIRSAIALATTSRPSPQAISLNAVARWAIFNDPTWKKGEYRKNPKDGLALARGIGHITFLSDESMWQKFGRRFNAR DGLFDFFGQFEVERYLSYNGYNFVDRFDTNSFLYLAKALDLYDTAWGYESLEEAFSRVKAPIQFFAFTSDWLYPPYQTEE MATILRSLGKPVEYHLIESAYGHDAFLLEHETFAPMVREFLDKVERSE
Specific function: Unknown
COG id: COG2021
COG function: function code E; Homoserine acetyltransferase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. HTA family
Homologues:
Organism=Saccharomyces cerevisiae, GI6324052, Length=236, Percent_Identity=39.4067796610169, Blast_Score=167, Evalue=2e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): METX_GEOMG (Q39RX3)
Other databases:
- EMBL: CP000148 - RefSeq: YP_385726.1 - STRING: Q39RX3 - GeneID: 3739286 - GenomeReviews: CP000148_GR - KEGG: gme:Gmet_2783 - NMPDR: fig|269799.3.peg.2761 - eggNOG: COG2021 - HOGENOM: HBG692920 - OMA: VSFTSDW - PhylomeDB: Q39RX3 - ProtClustDB: CLSK828845 - BioCyc: GMET269799:GMET_2783-MONOMER - GO: GO:0005737 - HAMAP: MF_00296 - InterPro: IPR000073 - InterPro: IPR008220 - PIRSF: PIRSF000443 - TIGRFAMs: TIGR01392
Pfam domain/function: PF00561 Abhydrolase_1
EC number: =2.3.1.31
Molecular weight: Translated: 41582; Mature: 41451
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: ACT_SITE 150-150 ACT_SITE 344-344
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVGIVQEQSVTFDTELRLESGRILGPITLAYETYGELNADRSNAILVAHAWTGNAHLAG CCCCCEECCCCEEEEEEEECCCCEEEEEEEEEEHHCCCCCCCCCEEEEEEEECCCEEECC KNSEEDTKPGWWDAIVGPGRLLDTDRCFVICSNVIGSCYGSTGPASINPKTGKRYNLTFP CCCCCCCCCCCCHHCCCCCCEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEC VITVRDMVRAQALLLDHLGIDRLLTVLGGSMGGMQALEWATQFPDRIRSAIALATTSRPS HHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCC PQAISLNAVARWAIFNDPTWKKGEYRKNPKDGLALARGIGHITFLSDESMWQKFGRRFNA CCEEEHHHEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCHHHHHHHHHCCCC RDGLFDFFGQFEVERYLSYNGYNFVDRFDTNSFLYLAKALDLYDTAWGYESLEEAFSRVK CCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH APIQFFAFTSDWLYPPYQTEEMATILRSLGKPVEYHLIESAYGHDAFLLEHETFAPMVRE CCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEHHHHCCCCCEEEEECHHHHHHHHH FLDKVERSE HHHHHHCCC >Mature Secondary Structure SVGIVQEQSVTFDTELRLESGRILGPITLAYETYGELNADRSNAILVAHAWTGNAHLAG CCCCEECCCCEEEEEEEECCCCEEEEEEEEEEHHCCCCCCCCCEEEEEEEECCCEEECC KNSEEDTKPGWWDAIVGPGRLLDTDRCFVICSNVIGSCYGSTGPASINPKTGKRYNLTFP CCCCCCCCCCCCHHCCCCCCEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEC VITVRDMVRAQALLLDHLGIDRLLTVLGGSMGGMQALEWATQFPDRIRSAIALATTSRPS HHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCC PQAISLNAVARWAIFNDPTWKKGEYRKNPKDGLALARGIGHITFLSDESMWQKFGRRFNA CCEEEHHHEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCHHHHHHHHHCCCC RDGLFDFFGQFEVERYLSYNGYNFVDRFDTNSFLYLAKALDLYDTAWGYESLEEAFSRVK CCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH APIQFFAFTSDWLYPPYQTEEMATILRSLGKPVEYHLIESAYGHDAFLLEHETFAPMVRE CCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEHHHHCCCCCEEEEECHHHHHHHHH FLDKVERSE HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA