Click here to switch to the map view.

The map label for this gene is 78223978

Identifier: 78223978

GI number: 78223978

Start: 3145448

End: 3145774

Strand: Direct

Name: 78223978

Synonym: Gmet_2782

Alternate gene names: NA

Gene position: 3145448-3145774 (Clockwise)

Preceding gene: 78223972

Following gene: 78223979

Centisome position: 78.69

GC content: 52.6

Gene sequence:

>327_bases
ATGCTCAGGATTGGCGCGGAGTTTCACCTCCAGTGCCAGGGAAATTTTCATTTGACAAACCCCGGGGGCTTCCGTATTCT
TTCTGGAAAATTAAATAGAAACGCATTCTTATCAAGAGTGGTGGAGGGAAAGGCCCTGCGAAGCCACAGCAACCGGTCTT
CCGGGTCGCATTCGAGCACGAAGGCGAACCGGAAGGTGACAGGTGCTAAATCCTGCCGGGAGGCAAAGATGAGAACGGCG
CTTGACGATAGCCACAACTGTCAACAAAGCCCCTTCTCGCCACCGCGGGAAGGGGCTTTTGTTTCCGAACCATTTATTCA
GGATTGA

Upstream 100 bases:

>100_bases
AGTAGTGTAAGTATAGAAGAGGAGCGGGATAATGCAAGCGTACCGTTAAGGCCGGAAGCGGGGCCACTATACCCTATCCC
CGTCGGCGTTTGCAAACGAA

Downstream 100 bases:

>100_bases
CGCATGTCCGTCGGCATCGTACAGGAACAATCAGTAACCTTCGACACGGAACTCCGGCTGGAGAGCGGCCGCATTCTCGG
CCCCATCACCCTCGCCTACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MLRIGAEFHLQCQGNFHLTNPGGFRILSGKLNRNAFLSRVVEGKALRSHSNRSSGSHSSTKANRKVTGAKSCREAKMRTA
LDDSHNCQQSPFSPPREGAFVSEPFIQD

Sequences:

>Translated_108_residues
MLRIGAEFHLQCQGNFHLTNPGGFRILSGKLNRNAFLSRVVEGKALRSHSNRSSGSHSSTKANRKVTGAKSCREAKMRTA
LDDSHNCQQSPFSPPREGAFVSEPFIQD
>Mature_108_residues
MLRIGAEFHLQCQGNFHLTNPGGFRILSGKLNRNAFLSRVVEGKALRSHSNRSSGSHSSTKANRKVTGAKSCREAKMRTA
LDDSHNCQQSPFSPPREGAFVSEPFIQD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11900; Mature: 11900

Theoretical pI: Translated: 11.01; Mature: 11.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRIGAEFHLQCQGNFHLTNPGGFRILSGKLNRNAFLSRVVEGKALRSHSNRSSGSHSST
CEECCCEEEEEECCCEEEECCCCEEEEECCCCHHHHHHHHHHCHHHHCCCCCCCCCCCCC
KANRKVTGAKSCREAKMRTALDDSHNCQQSPFSPPREGAFVSEPFIQD
CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCC
>Mature Secondary Structure
MLRIGAEFHLQCQGNFHLTNPGGFRILSGKLNRNAFLSRVVEGKALRSHSNRSSGSHSST
CEECCCEEEEEECCCEEEECCCCEEEEECCCCHHHHHHHHHHCHHHHCCCCCCCCCCCCC
KANRKVTGAKSCREAKMRTALDDSHNCQQSPFSPPREGAFVSEPFIQD
CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA