| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is pta [H]
Identifier: 78223980
GI number: 78223980
Start: 3146936
End: 3148069
Strand: Direct
Name: pta [H]
Synonym: Gmet_2784
Alternate gene names: 78223980
Gene position: 3146936-3148069 (Clockwise)
Preceding gene: 78223979
Following gene: 78223983
Centisome position: 78.72
GC content: 65.43
Gene sequence:
>1134_bases ATGGCGAGGAAGATCTTCATAGCGGCCACGGGACAGAACTGCGGCAAGACCACCACCAGCCTCTCGCTGCTCCACCTGGC TCGGAAGAAATACGGCAGGGTCGGCTTCATGAAACCCCTGGGCCCCAAGCCGGCAACGCTGCGCGGGGTCCCCATGGACA AGGACGCGGCCCTCATGGCCCAGGTCTTCGGCCTGACAAAAGACCTGCGCTGGATGTCGCCGGTGGTGGTCTACCCCGAC ACCAGCCGGAAGGTCATCGACGGCGAGATCTCCCCCGACGGACTCCGGGAGCGGATCCTGGAAGCCCATGCCGAGTTGGA GAAGCAGTGCGACTTCATCATCATCGAAGGGTCGGGGCATCCGGGGGTCGGCTCCGTGATGAAACTCTCCAACGCCCGTA TCGCCCGGATGCTCGATGCGCCGGTGCTCATGGTGACCGGCGGCGGCGTGGGGAACGTGGTGGACGCGGTCTCCGTGGAC CTGGCCCTCTTCGAGAAGGAGGGTGCCCAGGTCCGGGCCATCCTGGCCAACAAGCTGGTTCCCCACAAGCGGGAGCAGAT CCTCGACTACCTGCAGCGGGCCTTCGCCGACGAACCCTTCCCCGTCATCGGCGGCTTCGACTACCAGCCGGTCCTGGCCA ACCCGACGCTGGACCGGGTCTCGAAGCTCCTGGACCTCCCCCTCCACGGCAACCGGCGCGACCGGAACCGGATCATCCAC AACGTGCAGATCGGCGCCGCCTCCACCCAGCGGGTGGCGGAACTGCTGCGGGACTCCACCCTCCTCATCGTCACCAGCAG CCGCGACGAACTCCTCGTGACCCTGGCCAACCTCTACCAGATGCCCGAATACCGCTCCAAGCTCGTGGGGCTCGTCATCC CCGGCATCATCCCGGTCAGCACCATCACCCAGCAGATCCTGGAGCGGAGCAAAATCCCCTTCCTCCGCAACTACACCCAC ACCACTGCCGAGCTGTACCACCTCATCACCGAGGATGTCTCGAAGATCACCGCCGAAGACACCGAAAAGCTCGCCCTCAT CAGGAGCCTGGCCGAAACCCGCCTCGATTTCGACCGGCTCGATGCGCTCTTCGGGCCGGCCCCACGTGATCCAGACCGTC CTCGCACTCCCTGA
Upstream 100 bases:
>100_bases CTTCGCGCCGATGGTGCGGGAATTCCTCGACAAGGTGGAACGTTCGGAGTAGCCTCGGGTGAACATTGCGTTGCAGTGAT GCACTGCCGGGAGGTGAACG
Downstream 100 bases:
>100_bases CATTCAAATGCGTTTGAAACACTGAGCAACTGAGCAACGGAGTAAAATCTAGAGGGGAATTCCGTCGAAATCCGGGTAAT ACGCGTAACAGGGTCAAGCA
Product: cobyrinic acid a,c-diamide synthase family protein
Products: NA
Alternate protein names: Phosphotransacetylase [H]
Number of amino acids: Translated: 377; Mature: 376
Protein sequence:
>377_residues MARKIFIAATGQNCGKTTTSLSLLHLARKKYGRVGFMKPLGPKPATLRGVPMDKDAALMAQVFGLTKDLRWMSPVVVYPD TSRKVIDGEISPDGLRERILEAHAELEKQCDFIIIEGSGHPGVGSVMKLSNARIARMLDAPVLMVTGGGVGNVVDAVSVD LALFEKEGAQVRAILANKLVPHKREQILDYLQRAFADEPFPVIGGFDYQPVLANPTLDRVSKLLDLPLHGNRRDRNRIIH NVQIGAASTQRVAELLRDSTLLIVTSSRDELLVTLANLYQMPEYRSKLVGLVIPGIIPVSTITQQILERSKIPFLRNYTH TTAELYHLITEDVSKITAEDTEKLALIRSLAETRLDFDRLDALFGPAPRDPDRPRTP
Sequences:
>Translated_377_residues MARKIFIAATGQNCGKTTTSLSLLHLARKKYGRVGFMKPLGPKPATLRGVPMDKDAALMAQVFGLTKDLRWMSPVVVYPD TSRKVIDGEISPDGLRERILEAHAELEKQCDFIIIEGSGHPGVGSVMKLSNARIARMLDAPVLMVTGGGVGNVVDAVSVD LALFEKEGAQVRAILANKLVPHKREQILDYLQRAFADEPFPVIGGFDYQPVLANPTLDRVSKLLDLPLHGNRRDRNRIIH NVQIGAASTQRVAELLRDSTLLIVTSSRDELLVTLANLYQMPEYRSKLVGLVIPGIIPVSTITQQILERSKIPFLRNYTH TTAELYHLITEDVSKITAEDTEKLALIRSLAETRLDFDRLDALFGPAPRDPDRPRTP >Mature_376_residues ARKIFIAATGQNCGKTTTSLSLLHLARKKYGRVGFMKPLGPKPATLRGVPMDKDAALMAQVFGLTKDLRWMSPVVVYPDT SRKVIDGEISPDGLRERILEAHAELEKQCDFIIIEGSGHPGVGSVMKLSNARIARMLDAPVLMVTGGGVGNVVDAVSVDL ALFEKEGAQVRAILANKLVPHKREQILDYLQRAFADEPFPVIGGFDYQPVLANPTLDRVSKLLDLPLHGNRRDRNRIIHN VQIGAASTQRVAELLRDSTLLIVTSSRDELLVTLANLYQMPEYRSKLVGLVIPGIIPVSTITQQILERSKIPFLRNYTHT TAELYHLITEDVSKITAEDTEKLALIRSLAETRLDFDRLDALFGPAPRDPDRPRTP
Specific function: Bioconversion of pimelate into dethiobiotin. [C]
COG id: COG0857
COG function: function code R; BioD-like N-terminal domain of phosphotransacetylase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the phosphate acetyltransferase and butyryltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 - InterPro: IPR010766 - InterPro: IPR016475 - InterPro: IPR004614 - InterPro: IPR002505 [H]
Pfam domain/function: PF01656 CbiA; PF07085 DRTGG; PF01515 PTA_PTB [H]
EC number: =2.3.1.8 [H]
Molecular weight: Translated: 41706; Mature: 41575
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARKIFIAATGQNCGKTTTSLSLLHLARKKYGRVGFMKPLGPKPATLRGVPMDKDAALMA CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCHHHHHH QVFGLTKDLRWMSPVVVYPDTSRKVIDGEISPDGLRERILEAHAELEKQCDFIIIEGSGH HHHHHHHHHHHCCCEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCC PGVGSVMKLSNARIARMLDAPVLMVTGGGVGNVVDAVSVDLALFEKEGAQVRAILANKLV CCCCHHHHHCCHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC PHKREQILDYLQRAFADEPFPVIGGFDYQPVLANPTLDRVSKLLDLPLHGNRRDRNRIIH CCHHHHHHHHHHHHHCCCCCCEECCCCCCCEECCCCHHHHHHHHCCCCCCCCCHHHHHEE NVQIGAASTQRVAELLRDSTLLIVTSSRDELLVTLANLYQMPEYRSKLVGLVIPGIIPVS EEEECCCCHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCHHHHHHHHHHHHCCCCCHH TITQQILERSKIPFLRNYTHTTAELYHLITEDVSKITAEDTEKLALIRSLAETRLDFDRL HHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH DALFGPAPRDPDRPRTP HHHHCCCCCCCCCCCCC >Mature Secondary Structure ARKIFIAATGQNCGKTTTSLSLLHLARKKYGRVGFMKPLGPKPATLRGVPMDKDAALMA CCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCHHHHHH QVFGLTKDLRWMSPVVVYPDTSRKVIDGEISPDGLRERILEAHAELEKQCDFIIIEGSGH HHHHHHHHHHHCCCEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCC PGVGSVMKLSNARIARMLDAPVLMVTGGGVGNVVDAVSVDLALFEKEGAQVRAILANKLV CCCCHHHHHCCHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC PHKREQILDYLQRAFADEPFPVIGGFDYQPVLANPTLDRVSKLLDLPLHGNRRDRNRIIH CCHHHHHHHHHHHHHCCCCCCEECCCCCCCEECCCCHHHHHHHHCCCCCCCCCHHHHHEE NVQIGAASTQRVAELLRDSTLLIVTSSRDELLVTLANLYQMPEYRSKLVGLVIPGIIPVS EEEECCCCHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCHHHHHHHHHHHHCCCCCHH TITQQILERSKIPFLRNYTHTTAELYHLITEDVSKITAEDTEKLALIRSLAETRLDFDRL HHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH DALFGPAPRDPDRPRTP HHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]