| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78223849
Identifier: 78223849
GI number: 78223849
Start: 3000691
End: 3001818
Strand: Reverse
Name: 78223849
Synonym: Gmet_2653
Alternate gene names: NA
Gene position: 3001818-3000691 (Counterclockwise)
Preceding gene: 78223850
Following gene: 78223848
Centisome position: 75.09
GC content: 58.16
Gene sequence:
>1128_bases ATGGGACGATTCTTTGTCAGTTCAGCCATGGTAGTTGTTTTGTTTGTCTCTGTTTCCGTCTCCCACGCCCGGATGACCGA CGCGGACCGCAACGCACTGCTCGGCGAGATCTTCAAGCTTGAAACCGCGAAGGAAAAGATCGTCGCAGAAATCAGGAAAT TCGATGACGCGATCAAGAAGAGCGCCGCCTCGATCAGCAAATCGGAGACCATTATCGGACTCGCCCGACAGAAGGGGAAC GCCCAGGCCGAAGCGGTTGCCGGCAAGGCATTGGCTGAGGCAAAGGCGTCGCAGTCCCGCAGCCTGAAGAACAAGAGTGA TGCCGAACTGGTGCTGCGGCGCCTGGAACGGACCCTGTCCCTGGCGAAAAGCGGCGACAAGAATATCGAGGCGATACGGG AGCAGGTGGAGTTCGAGACACAATACGCCACATGGGAGAAGAAACAGCAGCAGCTTATCCAGCAGAGGCTCCAGGAGCCC AACAAAACCGCCGGCGCAATCCAGCGCTCCCTCATGGCGAACGTGCCGCCGTTGCCGGGAAAAACCTTCAGCCAGCTCCA GTCGGGCGACGTGCTCCTTATCGAGCCGGAGGATGGTCGCCTGAAGGGGGTGAACCCCATCACCCTGGGGGACAACGCCG CCACCGGGGGGAACAAATCATTCGCCTCCCATACGGTCATCTATCTGAAGGAGGTCAACGGCACCAAGCTCTTCCTGGAC AACCAGCCGGGCGAGGGGCCGCGCATTATCACGGAAATTGATTTCCAAAACAGGTACGGGCACCGCGGCATGGACGTGGC AACGCTGGGGAAGCTGGCTGAACCGCTGCGGAACGATGAAGGGGAAGGCCTTTTCCGGGCGGCGATGGAGATGCACAAGA AAAACGCCGATAAAACAGCAAACAGCTGGTGGGGGGATACGAACTACGGCGTGGTGGGCAAGGATGAGGTGGTCTGTTCG GAGGCCGACTGGGCGTTGCTTAAAAATGCCGGGAAGTTCCTTCCGAAATCCTCTGACCGGGCCAAGGTCGAGCACGGCAT CGATTTAAGTCCGGCCGATTATTACAACTCCCCGTACTTTGTCGTTACCCCGCTGCAGATGCACAAAAATGACGGTAACA GCGATTGA
Upstream 100 bases:
>100_bases CAAGGGGGGAAGTCCCGTTTCCACCACGACCGGCAGGATCGACAATGCGAAGCTCGCGGAGCTTTTGCAGGGCGTAGCCG CCAATTAAGGGGAAAACCCG
Downstream 100 bases:
>100_bases AACCGGAGATGTCCCGCCCACTGGGCCGCGAAAGGATCAAACCATGAAAAAAACCCTGCCACAGCTCGTCATTATGTCGG TTCTCTGCCTGCTGGCCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 375; Mature: 374
Protein sequence:
>375_residues MGRFFVSSAMVVVLFVSVSVSHARMTDADRNALLGEIFKLETAKEKIVAEIRKFDDAIKKSAASISKSETIIGLARQKGN AQAEAVAGKALAEAKASQSRSLKNKSDAELVLRRLERTLSLAKSGDKNIEAIREQVEFETQYATWEKKQQQLIQQRLQEP NKTAGAIQRSLMANVPPLPGKTFSQLQSGDVLLIEPEDGRLKGVNPITLGDNAATGGNKSFASHTVIYLKEVNGTKLFLD NQPGEGPRIITEIDFQNRYGHRGMDVATLGKLAEPLRNDEGEGLFRAAMEMHKKNADKTANSWWGDTNYGVVGKDEVVCS EADWALLKNAGKFLPKSSDRAKVEHGIDLSPADYYNSPYFVVTPLQMHKNDGNSD
Sequences:
>Translated_375_residues MGRFFVSSAMVVVLFVSVSVSHARMTDADRNALLGEIFKLETAKEKIVAEIRKFDDAIKKSAASISKSETIIGLARQKGN AQAEAVAGKALAEAKASQSRSLKNKSDAELVLRRLERTLSLAKSGDKNIEAIREQVEFETQYATWEKKQQQLIQQRLQEP NKTAGAIQRSLMANVPPLPGKTFSQLQSGDVLLIEPEDGRLKGVNPITLGDNAATGGNKSFASHTVIYLKEVNGTKLFLD NQPGEGPRIITEIDFQNRYGHRGMDVATLGKLAEPLRNDEGEGLFRAAMEMHKKNADKTANSWWGDTNYGVVGKDEVVCS EADWALLKNAGKFLPKSSDRAKVEHGIDLSPADYYNSPYFVVTPLQMHKNDGNSD >Mature_374_residues GRFFVSSAMVVVLFVSVSVSHARMTDADRNALLGEIFKLETAKEKIVAEIRKFDDAIKKSAASISKSETIIGLARQKGNA QAEAVAGKALAEAKASQSRSLKNKSDAELVLRRLERTLSLAKSGDKNIEAIREQVEFETQYATWEKKQQQLIQQRLQEPN KTAGAIQRSLMANVPPLPGKTFSQLQSGDVLLIEPEDGRLKGVNPITLGDNAATGGNKSFASHTVIYLKEVNGTKLFLDN QPGEGPRIITEIDFQNRYGHRGMDVATLGKLAEPLRNDEGEGLFRAAMEMHKKNADKTANSWWGDTNYGVVGKDEVVCSE ADWALLKNAGKFLPKSSDRAKVEHGIDLSPADYYNSPYFVVTPLQMHKNDGNSD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41194; Mature: 41063
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRFFVSSAMVVVLFVSVSVSHARMTDADRNALLGEIFKLETAKEKIVAEIRKFDDAIKK CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAASISKSETIIGLARQKGNAQAEAVAGKALAEAKASQSRSLKNKSDAELVLRRLERTLS HHHHCCCCHHHEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH LAKSGDKNIEAIREQVEFETQYATWEKKQQQLIQQRLQEPNKTAGAIQRSLMANVPPLPG HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC KTFSQLQSGDVLLIEPEDGRLKGVNPITLGDNAATGGNKSFASHTVIYLKEVNGTKLFLD HHHHHHCCCCEEEEECCCCCEECCCCEEECCCCCCCCCCCCCCEEEEEEEECCCCEEEEE NQPGEGPRIITEIDFQNRYGHRGMDVATLGKLAEPLRNDEGEGLFRAAMEMHKKNADKTA CCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCC NSWWGDTNYGVVGKDEVVCSEADWALLKNAGKFLPKSSDRAKVEHGIDLSPADYYNSPYF CCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHCCCCCCCCHHHHCCCCCCCHHHCCCCEE VVTPLQMHKNDGNSD EEEEHHEECCCCCCC >Mature Secondary Structure GRFFVSSAMVVVLFVSVSVSHARMTDADRNALLGEIFKLETAKEKIVAEIRKFDDAIKK CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAASISKSETIIGLARQKGNAQAEAVAGKALAEAKASQSRSLKNKSDAELVLRRLERTLS HHHHCCCCHHHEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH LAKSGDKNIEAIREQVEFETQYATWEKKQQQLIQQRLQEPNKTAGAIQRSLMANVPPLPG HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC KTFSQLQSGDVLLIEPEDGRLKGVNPITLGDNAATGGNKSFASHTVIYLKEVNGTKLFLD HHHHHHCCCCEEEEECCCCCEECCCCEEECCCCCCCCCCCCCCEEEEEEEECCCCEEEEE NQPGEGPRIITEIDFQNRYGHRGMDVATLGKLAEPLRNDEGEGLFRAAMEMHKKNADKTA CCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCC NSWWGDTNYGVVGKDEVVCSEADWALLKNAGKFLPKSSDRAKVEHGIDLSPADYYNSPYF CCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHCCCCCCCCHHHHCCCCCCCHHHCCCCEE VVTPLQMHKNDGNSD EEEEHHEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA