| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is iorB [H]
Identifier: 78223033
GI number: 78223033
Start: 2039852
End: 2040430
Strand: Reverse
Name: iorB [H]
Synonym: Gmet_1826
Alternate gene names: 78223033
Gene position: 2040430-2039852 (Counterclockwise)
Preceding gene: 78223034
Following gene: 78223032
Centisome position: 51.04
GC content: 57.86
Gene sequence:
>579_bases ATGAGCGACACCATCACCAACATCCTCCTTGTCGGCGTGGGTGGGCAGGGGATTCTGCTCGCCTCGGAGGTTCTTTCGGA GACCTTCATGCAGGCCGGTTACGACGTAAAGAAAAGCGAGATCCACGGCATGTCCCAGCGGGGAGGGAGCGTCGTATCCC ACGTCCGTTACGGCCGGGAAGTTCACTCCCCCATCATTCCCGAAGGTGAAGGGGATATTCTTTTCGGCTTCGAGATACTG GAAACCTACCGCTCACTTCCCCTCATGAAAAACGGTGGGACAGTGATTGCCAACGACCTGCGCATTCCACCGCCATCGGT TCTCCTTGGGCAGGAGACCTATCCGGACGACCTTCCCGGCAAGATCGCGGCCATGTTCCCCGATTCACTCCTGGTTGACG GCCAGAAGCTGGCCGCCGAGGCGGGAAATGTCCGTGCAGCCAATACGGTGCTTCTCGGGGCTGTGTCGAAGCGGCTCGAC ATTCCCGATGAATGTTGGATCAAGGCCCTGGAAAAGATGATTCCACCGAAGGCCCTCAAAGTTAACCATGTTGCGTTCCA ACTGGGCCGGAGTCTTTGA
Upstream 100 bases:
>100_bases CTGACGGGAAGAAGGGGAAGGCATACATCGACCCGCTGCTCTGCAACGGATGCGACGTCTGCCGACAGCTTTGCAAATTC AACGCGATCGGGAGTGCCAA
Downstream 100 bases:
>100_bases TCGGGTAAGGAGTTCACGATGAGCTATTACAATGAAGAGTTCGAGACGCTTCCCCGCCAAGCCCTGGAGGCCCTGCAGCT CAAACGGCTTCAGGCCACTG
Product: indolepyruvate oxidoreductase subunit beta
Products: NA
Alternate protein names: IOR; Indolepyruvate ferredoxin oxidoreductase subunit beta [H]
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MSDTITNILLVGVGGQGILLASEVLSETFMQAGYDVKKSEIHGMSQRGGSVVSHVRYGREVHSPIIPEGEGDILFGFEIL ETYRSLPLMKNGGTVIANDLRIPPPSVLLGQETYPDDLPGKIAAMFPDSLLVDGQKLAAEAGNVRAANTVLLGAVSKRLD IPDECWIKALEKMIPPKALKVNHVAFQLGRSL
Sequences:
>Translated_192_residues MSDTITNILLVGVGGQGILLASEVLSETFMQAGYDVKKSEIHGMSQRGGSVVSHVRYGREVHSPIIPEGEGDILFGFEIL ETYRSLPLMKNGGTVIANDLRIPPPSVLLGQETYPDDLPGKIAAMFPDSLLVDGQKLAAEAGNVRAANTVLLGAVSKRLD IPDECWIKALEKMIPPKALKVNHVAFQLGRSL >Mature_191_residues SDTITNILLVGVGGQGILLASEVLSETFMQAGYDVKKSEIHGMSQRGGSVVSHVRYGREVHSPIIPEGEGDILFGFEILE TYRSLPLMKNGGTVIANDLRIPPPSVLLGQETYPDDLPGKIAAMFPDSLLVDGQKLAAEAGNVRAANTVLLGAVSKRLDI PDECWIKALEKMIPPKALKVNHVAFQLGRSL
Specific function: Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates [H]
COG id: COG1014
COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017719 - InterPro: IPR019752 - InterPro: IPR002869 [H]
Pfam domain/function: PF01558 POR [H]
EC number: =1.2.7.8 [H]
Molecular weight: Translated: 20631; Mature: 20500
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTITNILLVGVGGQGILLASEVLSETFMQAGYDVKKSEIHGMSQRGGSVVSHVRYGRE CCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCHHCCHHHHHHHHHHHH VHSPIIPEGEGDILFGFEILETYRSLPLMKNGGTVIANDLRIPPPSVLLGQETYPDDLPG HCCCCCCCCCCCEEEHHHHHHHHHHCCEECCCCEEEECCCCCCCCCEEECCCCCCCCCCC KIAAMFPDSLLVDGQKLAAEAGNVRAANTVLLGAVSKRLDIPDECWIKALEKMIPPKALK CEEECCCCHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEE VNHVAFQLGRSL HHHHHHHHHCCC >Mature Secondary Structure SDTITNILLVGVGGQGILLASEVLSETFMQAGYDVKKSEIHGMSQRGGSVVSHVRYGRE CCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCHHCCHHHHHHHHHHHH VHSPIIPEGEGDILFGFEILETYRSLPLMKNGGTVIANDLRIPPPSVLLGQETYPDDLPG HCCCCCCCCCCCEEEHHHHHHHHHHCCEECCCCEEEECCCCCCCCCEEECCCCCCCCCCC KIAAMFPDSLLVDGQKLAAEAGNVRAANTVLLGAVSKRLDIPDECWIKALEKMIPPKALK CEEECCCCHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEE VNHVAFQLGRSL HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12622808 [H]