| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
Click here to switch to the map view.
The map label for this gene is iorA [H]
Identifier: 78223034
GI number: 78223034
Start: 2040427
End: 2042184
Strand: Reverse
Name: iorA [H]
Synonym: Gmet_1827
Alternate gene names: 78223034
Gene position: 2042184-2040427 (Counterclockwise)
Preceding gene: 78223035
Following gene: 78223033
Centisome position: 51.09
GC content: 60.24
Gene sequence:
>1758_bases ATGAAGGAAATTCTTTCCGGCAACGAAGCCATCGCTCGGGGTGCTTTTGAGGCGGGGGTGAAGGTTGCCAGCGCCTACCC CGGCACCCCATCCACAGAAATCCTCGAAACTATCGTCAACTACAAAGAAATAGACGCCTCCTGGGCATCCAACGAAAAGG TTGCCGTTGAGGTGGCCATCGGTGCCTCCTTTGGCGGCGGACGGGCCATCGCGTGCATGAAGCACGTGGGGGTCAACGTG GCGGCCGATCCCCTGTTCACCCTGTCCTATACCGGCGTCGGGGGGGGATTTGTCCTGGTGGTTGCCGACGACCCGGAGAT GCATTCGTCCCAGAACGAGCAGGACAGCCGCAATTATGCCAAGTTCGCCAAGGTGCCGATGCTGGAGCCGTCTGACTCCC AGGAGTGCAAGGAGTTCACCCGGATCGCCTTTGAACTATCCGAGCAGTTCGATACCCCGGTGATGCTCCGCAGCTGCACC CGCATTTCCCACGGGAAATCCATCGTTGAACTGGCGGAACCGGTGGCCGGTCTCCCGACCCCGAAGCTCGTAAAGAACCC CTCCAAGCTCGTCATGCTTCCCGGCAACGCCAAGATCCGTCACCCGTTCGTGGAGGAGCGGCTCGTGAAGCTTGCCGAGT ATGGCGCCACGGCAACCCTCAACCGGATTGAGATGCGTGACACCGAGATCGGCATCATCACTGCCGGCGTTTCGTACCAG TATGTGCGCGAGGTGCTCCCCACCGCGTCGGTCCTCAAACTCGGCATGGTCCATCCGCTCCCCATGGCGCTCATTAAGGA GTTTGCCGCCAAGGTGAAGAAGCTGTACGTTGTCGAAGAGCTTGATCCCTTTATCGAGGAGCAGGTGAAAGCCGCCGGCA TCGCAGTCATCGGCAAGGAGATCATCTCCCGTTGCGGGGAGCTCACCCCCGGAAGGCTCCGCAAGGCATTCAACCTCCCT GACGCAAGCCAGACCACCGTTGAAAAGCTCCCGGGTCGTCCTCCCAACATGTGCCCCGGCTGTCCCCACCGGGGGGTCTT TTACAGCCTCAGCCAGCTCAAGGCATACGTCACCGGCGATATCGGCTGCTACACCCTCGGCTTCATGCCCCCCCTCAACG CCATGGATACCTGTGTCTGCATGGGTGCGAGCATAAGCAGCGCCAGCGGCATGGTCCGGGTCCTTTCCCCCGAAGAAAAG AAGAAAGTGGTGGCGGTCATTGGCGACTCCACCTTCCTTCATACCGGCATAAACAGTCTCATGGAGATGGCCTACAATCA GTCTCCCGCCACGGTCGTGCTCCTCGACAACCGGATAACCGCCATGACCGGACGCCAGGATAACCCCGCCTCCGGCTGGA CCCTGTCGGGCGGCGAGACCAACGCCGTCGATCTTGTGCAACTCTGCAAGGCCGTCGGTATCAGGCACGTGCGGGTGGTC GACCCCTTGAACCTGGAAGAAACCCGTGCAGCGCTCAATGAGGAGATGGAACGCCCCGAGCCGTCAGTCATCATAACCAA CCGTCCCTGTGTGCTGGTGAAGCGTGAAGGGGTATTCAAAAAAGGGCTTCTCCTCTCGATTGACCAGGATCACTGCACCG GCTGCAAAGCATGCCTCAAGATCGGCTGTCCGGCCATCGAGTGGCAGCCAGCCCCTGACGGGAAGAAGGGGAAGGCATAC ATCGACCCGCTGCTCTGCAACGGATGCGACGTCTGCCGACAGCTTTGCAAATTCAACGCGATCGGGAGTGCCAAATGA
Upstream 100 bases:
>100_bases AACCCAAAGGAGTTGACTTACAATCCGCTTATTTTGTATAGTCCTTGAACCGTTAAGGGGGGCTTTCCCCTTATTTTATT TTCCAGGGATTATACACACC
Downstream 100 bases:
>100_bases GCGACACCATCACCAACATCCTCCTTGTCGGCGTGGGTGGGCAGGGGATTCTGCTCGCCTCGGAGGTTCTTTCGGAGACC TTCATGCAGGCCGGTTACGA
Product: indolepyruvate ferredoxin oxidoreductase subunit alpha
Products: NA
Alternate protein names: IOR; Indolepyruvate ferredoxin oxidoreductase subunit alpha [H]
Number of amino acids: Translated: 585; Mature: 585
Protein sequence:
>585_residues MKEILSGNEAIARGAFEAGVKVASAYPGTPSTEILETIVNYKEIDASWASNEKVAVEVAIGASFGGGRAIACMKHVGVNV AADPLFTLSYTGVGGGFVLVVADDPEMHSSQNEQDSRNYAKFAKVPMLEPSDSQECKEFTRIAFELSEQFDTPVMLRSCT RISHGKSIVELAEPVAGLPTPKLVKNPSKLVMLPGNAKIRHPFVEERLVKLAEYGATATLNRIEMRDTEIGIITAGVSYQ YVREVLPTASVLKLGMVHPLPMALIKEFAAKVKKLYVVEELDPFIEEQVKAAGIAVIGKEIISRCGELTPGRLRKAFNLP DASQTTVEKLPGRPPNMCPGCPHRGVFYSLSQLKAYVTGDIGCYTLGFMPPLNAMDTCVCMGASISSASGMVRVLSPEEK KKVVAVIGDSTFLHTGINSLMEMAYNQSPATVVLLDNRITAMTGRQDNPASGWTLSGGETNAVDLVQLCKAVGIRHVRVV DPLNLEETRAALNEEMERPEPSVIITNRPCVLVKREGVFKKGLLLSIDQDHCTGCKACLKIGCPAIEWQPAPDGKKGKAY IDPLLCNGCDVCRQLCKFNAIGSAK
Sequences:
>Translated_585_residues MKEILSGNEAIARGAFEAGVKVASAYPGTPSTEILETIVNYKEIDASWASNEKVAVEVAIGASFGGGRAIACMKHVGVNV AADPLFTLSYTGVGGGFVLVVADDPEMHSSQNEQDSRNYAKFAKVPMLEPSDSQECKEFTRIAFELSEQFDTPVMLRSCT RISHGKSIVELAEPVAGLPTPKLVKNPSKLVMLPGNAKIRHPFVEERLVKLAEYGATATLNRIEMRDTEIGIITAGVSYQ YVREVLPTASVLKLGMVHPLPMALIKEFAAKVKKLYVVEELDPFIEEQVKAAGIAVIGKEIISRCGELTPGRLRKAFNLP DASQTTVEKLPGRPPNMCPGCPHRGVFYSLSQLKAYVTGDIGCYTLGFMPPLNAMDTCVCMGASISSASGMVRVLSPEEK KKVVAVIGDSTFLHTGINSLMEMAYNQSPATVVLLDNRITAMTGRQDNPASGWTLSGGETNAVDLVQLCKAVGIRHVRVV DPLNLEETRAALNEEMERPEPSVIITNRPCVLVKREGVFKKGLLLSIDQDHCTGCKACLKIGCPAIEWQPAPDGKKGKAY IDPLLCNGCDVCRQLCKFNAIGSAK >Mature_585_residues MKEILSGNEAIARGAFEAGVKVASAYPGTPSTEILETIVNYKEIDASWASNEKVAVEVAIGASFGGGRAIACMKHVGVNV AADPLFTLSYTGVGGGFVLVVADDPEMHSSQNEQDSRNYAKFAKVPMLEPSDSQECKEFTRIAFELSEQFDTPVMLRSCT RISHGKSIVELAEPVAGLPTPKLVKNPSKLVMLPGNAKIRHPFVEERLVKLAEYGATATLNRIEMRDTEIGIITAGVSYQ YVREVLPTASVLKLGMVHPLPMALIKEFAAKVKKLYVVEELDPFIEEQVKAAGIAVIGKEIISRCGELTPGRLRKAFNLP DASQTTVEKLPGRPPNMCPGCPHRGVFYSLSQLKAYVTGDIGCYTLGFMPPLNAMDTCVCMGASISSASGMVRVLSPEEK KKVVAVIGDSTFLHTGINSLMEMAYNQSPATVVLLDNRITAMTGRQDNPASGWTLSGGETNAVDLVQLCKAVGIRHVRVV DPLNLEETRAALNEEMERPEPSVIITNRPCVLVKREGVFKKGLLLSIDQDHCTGCKACLKIGCPAIEWQPAPDGKKGKAY IDPLLCNGCDVCRQLCKFNAIGSAK
Specific function: Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates [H]
COG id: COG4231
COG function: function code C; Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR017721 - InterPro: IPR002880 - InterPro: IPR011766 - InterPro: IPR009014 - InterPro: IPR015941 [H]
Pfam domain/function: PF01855 POR_N; PF02775 TPP_enzyme_C [H]
EC number: =1.2.7.8 [H]
Molecular weight: Translated: 63116; Mature: 63116
Theoretical pI: Translated: 7.12; Mature: 7.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEILSGNEAIARGAFEAGVKVASAYPGTPSTEILETIVNYKEIDASWASNEKVAVEVAI CCCHHCCCHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEE GASFGGGRAIACMKHVGVNVAADPLFTLSYTGVGGGFVLVVADDPEMHSSQNEQDSRNYA ECCCCCCHHHHHHHHCCCCEECCCEEEEEEECCCCCEEEEEECCCCCCCCCCCHHHHHHH KFAKVPMLEPSDSQECKEFTRIAFELSEQFDTPVMLRSCTRISHGKSIVELAEPVAGLPT HHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCC PKLVKNPSKLVMLPGNAKIRHPFVEERLVKLAEYGATATLNRIEMRDTEIGIITAGVSYQ CHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCEEEEEEECCCHH YVREVLPTASVLKLGMVHPLPMALIKEFAAKVKKLYVVEELDPFIEEQVKAAGIAVIGKE HHHHHHCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH IISRCGELTPGRLRKAFNLPDASQTTVEKLPGRPPNMCPGCPHRGVFYSLSQLKAYVTGD HHHHCCCCCHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHEECC IGCYTLGFMPPLNAMDTCVCMGASISSASGMVRVLSPEEKKKVVAVIGDSTFLHTGINSL CCEEEECCCCCCCHHHHHHHCCCCCCCCCCEEEEECCCCCCEEEEEECCCHHHHHHHHHH MEMAYNQSPATVVLLDNRITAMTGRQDNPASGWTLSGGETNAVDLVQLCKAVGIRHVRVV HHHHHCCCCCEEEEECCCEEEECCCCCCCCCCEEECCCCCCHHHHHHHHHHHCCCEEEEE DPLNLEETRAALNEEMERPEPSVIITNRPCVLVKREGVFKKGLLLSIDQDHCTGCKACLK CCCCHHHHHHHHHHHHHCCCCCEEEECCCEEEEECCCCCCCCCEEEECCCHHHHHHHHHH IGCPAIEWQPAPDGKKGKAYIDPLLCNGCDVCRQLCKFNAIGSAK HCCCCCEECCCCCCCCCCEEECHHHCCCHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKEILSGNEAIARGAFEAGVKVASAYPGTPSTEILETIVNYKEIDASWASNEKVAVEVAI CCCHHCCCHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEE GASFGGGRAIACMKHVGVNVAADPLFTLSYTGVGGGFVLVVADDPEMHSSQNEQDSRNYA ECCCCCCHHHHHHHHCCCCEECCCEEEEEEECCCCCEEEEEECCCCCCCCCCCHHHHHHH KFAKVPMLEPSDSQECKEFTRIAFELSEQFDTPVMLRSCTRISHGKSIVELAEPVAGLPT HHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCC PKLVKNPSKLVMLPGNAKIRHPFVEERLVKLAEYGATATLNRIEMRDTEIGIITAGVSYQ CHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCEEEEEEECCCHH YVREVLPTASVLKLGMVHPLPMALIKEFAAKVKKLYVVEELDPFIEEQVKAAGIAVIGKE HHHHHHCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH IISRCGELTPGRLRKAFNLPDASQTTVEKLPGRPPNMCPGCPHRGVFYSLSQLKAYVTGD HHHHCCCCCHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHEECC IGCYTLGFMPPLNAMDTCVCMGASISSASGMVRVLSPEEKKKVVAVIGDSTFLHTGINSL CCEEEECCCCCCCHHHHHHHCCCCCCCCCCEEEEECCCCCCEEEEEECCCHHHHHHHHHH MEMAYNQSPATVVLLDNRITAMTGRQDNPASGWTLSGGETNAVDLVQLCKAVGIRHVRVV HHHHHCCCCCEEEEECCCEEEECCCCCCCCCCEEECCCCCCHHHHHHHHHHHCCCEEEEE DPLNLEETRAALNEEMERPEPSVIITNRPCVLVKREGVFKKGLLLSIDQDHCTGCKACLK CCCCHHHHHHHHHHHHHCCCCCEEEECCCEEEEECCCCCCCCCEEEECCCHHHHHHHHHH IGCPAIEWQPAPDGKKGKAYIDPLLCNGCDVCRQLCKFNAIGSAK HCCCCCEECCCCCCCCCCEEECHHHCCCHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]