Click here to switch to the map view.

The map label for this gene is yqeI [H]

Identifier: 78222973

GI number: 78222973

Start: 1978605

End: 1979024

Strand: Reverse

Name: yqeI [H]

Synonym: Gmet_1764

Alternate gene names: 78222973

Gene position: 1979024-1978605 (Counterclockwise)

Preceding gene: 78222974

Following gene: 78222970

Centisome position: 49.51

GC content: 54.76

Gene sequence:

>420_bases
ATGCCTTGGCCCGGGCCGGCATTAGCCGGAATCAAGGAATTAACGAGCGTACCTGCGTTGCCTTGCCGTTTGATTCATGC
TATACGTCCGGCAGCTCGAACAACCACAATTAAAGGAACCAGCATGCTGACCGGAAAACAGAAACGCTTTCTTCGTGGGA
TGGGGCACAGCCTCAATCCCGTAATTACAGTTGGCAAAGGAGAAATCTCCACTCCCCTCGTGCGCGAAACCAGCGAAGCA
CTCGAGCATCACGAACTCATCAAGGTGAAGATTCTCGAAAGCTGCATAATGGACCGTCACGAGGTGGCCGACGAGTTGGC
GAAAGCCTGTGGCGCAGAGGTCGCCCAGGTGCTCGGGAGAACTTTCCTGCTTTACCGCAAGGCCGAGGAACCGAAACTGG
AGCTTCCCAAGGGGAAGTAA

Upstream 100 bases:

>100_bases
CACGGGAAGCCGGTTGCACAACGCACCTTGCCAAACCGATCAAAAAGGAACTGCTCCTGAACACGATCAGCGCTGTGGTG
CTGCAGTAACCAGAGGGCTC

Downstream 100 bases:

>100_bases
CGCATCCATTCCATGACCAGAAAAAAAGCCCGGATTTCTCCGGGCTTTTTTTATCTTATCTCGATCAGGCGCTGACAACT
TCAGTTTCAGTCGTCGTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MPWPGPALAGIKELTSVPALPCRLIHAIRPAARTTTIKGTSMLTGKQKRFLRGMGHSLNPVITVGKGEISTPLVRETSEA
LEHHELIKVKILESCIMDRHEVADELAKACGAEVAQVLGRTFLLYRKAEEPKLELPKGK

Sequences:

>Translated_139_residues
MPWPGPALAGIKELTSVPALPCRLIHAIRPAARTTTIKGTSMLTGKQKRFLRGMGHSLNPVITVGKGEISTPLVRETSEA
LEHHELIKVKILESCIMDRHEVADELAKACGAEVAQVLGRTFLLYRKAEEPKLELPKGK
>Mature_138_residues
PWPGPALAGIKELTSVPALPCRLIHAIRPAARTTTIKGTSMLTGKQKRFLRGMGHSLNPVITVGKGEISTPLVRETSEAL
EHHELIKVKILESCIMDRHEVADELAKACGAEVAQVLGRTFLLYRKAEEPKLELPKGK

Specific function: Unknown

COG id: COG1534

COG function: function code J; Predicted RNA-binding protein containing KH domain, possibly ribosomal protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CRM domain [H]

Homologues:

Organism=Escherichia coli, GI1789570, Length=95, Percent_Identity=38.9473684210526, Blast_Score=72, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001890
- InterPro:   IPR017924
- ProDom:   PD010559 [H]

Pfam domain/function: PF01985 CRS1_YhbY [H]

EC number: NA

Molecular weight: Translated: 15196; Mature: 15065

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPWPGPALAGIKELTSVPALPCRLIHAIRPAARTTTIKGTSMLTGKQKRFLRGMGHSLNP
CCCCCHHHHHHHHHHCCCCHHHHHHHHHCCHHHCEECCCCHHHHHHHHHHHHHCCCCCCC
VITVGKGEISTPLVRETSEALEHHELIKVKILESCIMDRHEVADELAKACGAEVAQVLGR
EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFLLYRKAEEPKLELPKGK
HHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
PWPGPALAGIKELTSVPALPCRLIHAIRPAARTTTIKGTSMLTGKQKRFLRGMGHSLNP
CCCCHHHHHHHHHHCCCCHHHHHHHHHCCHHHCEECCCCHHHHHHHHHHHHHCCCCCCC
VITVGKGEISTPLVRETSEALEHHELIKVKILESCIMDRHEVADELAKACGAEVAQVLGR
EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFLLYRKAEEPKLELPKGK
HHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]