Definition Geobacter metallireducens GS-15 chromosome, complete genome.
Accession NC_007517
Length 3,997,420

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The map label for this gene is agaY [C]

Identifier: 78222970

GI number: 78222970

Start: 1975304

End: 1976389

Strand: Reverse

Name: agaY [C]

Synonym: Gmet_1761

Alternate gene names: 78222970

Gene position: 1976389-1975304 (Counterclockwise)

Preceding gene: 78222973

Following gene: 78222969

Centisome position: 49.44

GC content: 55.16

Gene sequence:

>1086_bases
ATGATAAATGATCTCCTCGAATTGGTTCCTCCGCGAATCCGCAACAAGATCGGGTCACAGTCGCGAATCTGCCTTCTCAA
TGGCCGCGACTTGTTCTCCGCTCTCAAAAACGAAAATTTGATCCTCATGGCCTGCAACCCACGGATCAAACATGTCATTC
CCGGCATCATGAAGGCCGCCGAGGAACTCGATGCCGTGATCGCCTTCGAGCTGACCCGCACCGAAGGGGGACTCAATGGA
GGCTACACCGGTCAAACCCCACAGGTATTTTTCGACACGGTAATCGAATGCGCCGAACGGTACAAATTCACAAAACCGTT
CATCATCCACGGCGACCACACCACCGTCCAGAACACCTCTCCCGAAGAGCAGGAGCGCGCCCGACTTCTCATTGAGGGAC
AGGTCAAAGCGGGTTATACCTCCTTCGCCATCGACGCTTCTTTCAATCCTCTGCCGGACAATATTCGAATCACCGCTGAA
TTGGCGGCAACCGTCGAGAACGAGGGGTACGGCCTTGAGGTGGAACTGGGGGAAGTCAAGCGGGCAGGAGTTGAATCGAA
CCTGACCACGGTGGAGGAAACTCAAGAATTTTTGTCCTGTCTCGTGAAAAAAGGGATTCATCCCCAACTCCTTGCCATTG
ACAACGGCTCCAAGCGGGGAAATTACCTGGACGGCGAGATGATCAGAATCGATCTGGACCGGACAAAGGAAATCTACGAC
GCCGCCGTTCGCCTCGGCCTTGCGGGATTGGTACAGCACGGTATTACCGGAACTCCCCTTAGGCTCGTGGGCAAACTGGC
CAACTATGGTATCCGCAAGGGAAACATCGGCACCCTCTGGCAAAACGTGGCCCATGCAGGGCTTCCCCTCGACCTCATGG
ACGCCATGCGCCACTGGGCACGGGAGAACGGCAAGGACATAAAATTCGCCACAAAAATATTCAAATCCGAGATCGACGCG
ATACCCGAGGAGAATGCAAAGCAGATTTTTGACATGGCATACCGCGAAGCCAAGGAGTTTCTTCAGGCGTTCCACGCCAA
GGGAAGCGCCTCCCGACTGGCCGCCTCCATCGGGAAACCCCGGTGA

Upstream 100 bases:

>100_bases
GGCGAAAAGATATCCATTGACTACAATTGGCGTATCATGCTAAATTTCTAAGCCTTTTTTAAGAATATCAACTTTTTGCC
AGGATTACATACTGAACATT

Downstream 100 bases:

>100_bases
GAGTCATCGGTGGAACCGCGCGGGGACGCCGCCTTGCCGCCCCGCGGGGCGAACGGGTACGCCCCACTGCGGATCGGGTC
AAGGAGGCATTGTTCAGCAT

Product: fructose-bisphosphate aldolase

Products: Glycerone-Phosphate; D-Glyceraldehyde 3-Phosphate. [C]

Alternate protein names: Fructose-Bisphosphate Aldolase; Ketose-Bisphosphate Aldolase Family Protein; Fructose-Bisphosphate Aldolase Class-II; Fructose/Tagatose Bisphosphate Aldolase-Like Protein; Ketose-Bisphosphate Aldolase Class-II Family Protein

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MINDLLELVPPRIRNKIGSQSRICLLNGRDLFSALKNENLILMACNPRIKHVIPGIMKAAEELDAVIAFELTRTEGGLNG
GYTGQTPQVFFDTVIECAERYKFTKPFIIHGDHTTVQNTSPEEQERARLLIEGQVKAGYTSFAIDASFNPLPDNIRITAE
LAATVENEGYGLEVELGEVKRAGVESNLTTVEETQEFLSCLVKKGIHPQLLAIDNGSKRGNYLDGEMIRIDLDRTKEIYD
AAVRLGLAGLVQHGITGTPLRLVGKLANYGIRKGNIGTLWQNVAHAGLPLDLMDAMRHWARENGKDIKFATKIFKSEIDA
IPEENAKQIFDMAYREAKEFLQAFHAKGSASRLAASIGKPR

Sequences:

>Translated_361_residues
MINDLLELVPPRIRNKIGSQSRICLLNGRDLFSALKNENLILMACNPRIKHVIPGIMKAAEELDAVIAFELTRTEGGLNG
GYTGQTPQVFFDTVIECAERYKFTKPFIIHGDHTTVQNTSPEEQERARLLIEGQVKAGYTSFAIDASFNPLPDNIRITAE
LAATVENEGYGLEVELGEVKRAGVESNLTTVEETQEFLSCLVKKGIHPQLLAIDNGSKRGNYLDGEMIRIDLDRTKEIYD
AAVRLGLAGLVQHGITGTPLRLVGKLANYGIRKGNIGTLWQNVAHAGLPLDLMDAMRHWARENGKDIKFATKIFKSEIDA
IPEENAKQIFDMAYREAKEFLQAFHAKGSASRLAASIGKPR
>Mature_361_residues
MINDLLELVPPRIRNKIGSQSRICLLNGRDLFSALKNENLILMACNPRIKHVIPGIMKAAEELDAVIAFELTRTEGGLNG
GYTGQTPQVFFDTVIECAERYKFTKPFIIHGDHTTVQNTSPEEQERARLLIEGQVKAGYTSFAIDASFNPLPDNIRITAE
LAATVENEGYGLEVELGEVKRAGVESNLTTVEETQEFLSCLVKKGIHPQLLAIDNGSKRGNYLDGEMIRIDLDRTKEIYD
AAVRLGLAGLVQHGITGTPLRLVGKLANYGIRKGNIGTLWQNVAHAGLPLDLMDAMRHWARENGKDIKFATKIFKSEIDA
IPEENAKQIFDMAYREAKEFLQAFHAKGSASRLAASIGKPR

Specific function: Catalyzes The Reversible Condensation Of Dihydroxyacetone Phosphate With Glyceraldehyde 3-Phosphate To Produce Tagatose 1,6-Bisphosphate. [C]

COG id: COG0191

COG function: function code G; Fructose/tagatose bisphosphate aldolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 4.1.2.- [C]

Molecular weight: Translated: 39942; Mature: 39942

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINDLLELVPPRIRNKIGSQSRICLLNGRDLFSALKNENLILMACNPRIKHVIPGIMKAA
CCCHHHHHCCHHHHHHCCCCCCEEEECCHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHH
EELDAVIAFELTRTEGGLNGGYTGQTPQVFFDTVIECAERYKFTKPFIIHGDHTTVQNTS
HHHHHEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCC
PEEQERARLLIEGQVKAGYTSFAIDASFNPLPDNIRITAELAATVENEGYGLEVELGEVK
CCHHHHCEEEEEECCCCCCEEEEEECCCCCCCCCEEEEEEEEEEECCCCCEEEEEHHHHH
RAGVESNLTTVEETQEFLSCLVKKGIHPQLLAIDNGSKRGNYLDGEMIRIDLDRTKEIYD
HCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEEEECHHHHHHHH
AAVRLGLAGLVQHGITGTPLRLVGKLANYGIRKGNIGTLWQNVAHAGLPLDLMDAMRHWA
HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH
RENGKDIKFATKIFKSEIDAIPEENAKQIFDMAYREAKEFLQAFHAKGSASRLAASIGKP
HCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCC
R
C
>Mature Secondary Structure
MINDLLELVPPRIRNKIGSQSRICLLNGRDLFSALKNENLILMACNPRIKHVIPGIMKAA
CCCHHHHHCCHHHHHHCCCCCCEEEECCHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHH
EELDAVIAFELTRTEGGLNGGYTGQTPQVFFDTVIECAERYKFTKPFIIHGDHTTVQNTS
HHHHHEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCC
PEEQERARLLIEGQVKAGYTSFAIDASFNPLPDNIRITAELAATVENEGYGLEVELGEVK
CCHHHHCEEEEEECCCCCCEEEEEECCCCCCCCCEEEEEEEEEEECCCCCEEEEEHHHHH
RAGVESNLTTVEETQEFLSCLVKKGIHPQLLAIDNGSKRGNYLDGEMIRIDLDRTKEIYD
HCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEEEECHHHHHHHH
AAVRLGLAGLVQHGITGTPLRLVGKLANYGIRKGNIGTLWQNVAHAGLPLDLMDAMRHWA
HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH
RENGKDIKFATKIFKSEIDAIPEENAKQIFDMAYREAKEFLQAFHAKGSASRLAASIGKP
HCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCC
R
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: D-Tagatose 1,6-Bisphosphate 1,6-Bisphosphate [C]

Specific reaction: D-Tagatose 1,6-Bisphosphate 1,6-Bisphosphate = Glycerone-Phosphate + D-Glyceraldehyde 3-Phosphate. [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA