Click here to switch to the map view.

The map label for this gene is 78222858

Identifier: 78222858

GI number: 78222858

Start: 1851956

End: 1852579

Strand: Reverse

Name: 78222858

Synonym: Gmet_1649

Alternate gene names: NA

Gene position: 1852579-1851956 (Counterclockwise)

Preceding gene: 78222863

Following gene: 78222846

Centisome position: 46.34

GC content: 49.84

Gene sequence:

>624_bases
ATGAAGCCAATCGCCAGCATTGCCCTCCTTCTCTGCCTCGTCTCCTTTTCCGCCATGGCAGAAGAGTCCCCAAAGGTTCT
CCCGCAACCGGCCGCCGAACCGCCAAAGATTCTCCAACCAGCCCCTGAACTACTTAAAACCGCCGAACCCCCAAAGCTCG
CAGAGCCATCACAAGCCCAACAGCCCATGAAAATCGGGTACGTAGATTTATCGAAAATTGCCACTGATTCGGCTCCCGGC
AAGGCAGCAAGTGCCAAGATGAAGGAAAAAACCGAAAAATACCGTTCACAGATTACCGCACGGCAAAAAAAGCTCGAAAA
TATGAAGAAGGATATTGAAGCGAAGCTGCCCAGCCTCACGTCACAACAACGACAGGCAAAGGTAAAGGAATTGGAGAAAA
AGGTCGGAGAATATCAGAAGTACGTTCAGGACGCCGAGAAAGCGATGCGGAAAACCGAGGGAGAATTGACAGAATCAATG
TCCAAGGCTATTCAGAAGGCTGCTGACGATTACGGCAAAGCCAACGGATTTGCCGTAATCGTACCGAAGCGTGACCTGCT
CTATCTTGGCGACAAGGTCGATGTGAAAGATGTGACGGAAGATATATTAAAAAGCATCCGGTAA

Upstream 100 bases:

>100_bases
CGGGGGAAATGTGCATAACATACGGTTTTGTTTGCCTGAATTGTGCAAACCGCGTATCTTCGTCCCGTGATGCAGTTCAA
CATTTCGCAAGAGGTGCCCT

Downstream 100 bases:

>100_bases
GTCTCTCCTGTTTGCGGGAGTCATCGTAATGCAAACAAGCGGGGGGCACCGGATACCAGATGCCCCCCGCTTGTTTGCAG
ATCATAGAGGCCATTTTATC

Product: Outer membrane chaperone Skp (OmpH)

Products: NA

Alternate protein names: Outer Membrane Protein; OmpH-Like Outer Membrane Protein

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MKPIASIALLLCLVSFSAMAEESPKVLPQPAAEPPKILQPAPELLKTAEPPKLAEPSQAQQPMKIGYVDLSKIATDSAPG
KAASAKMKEKTEKYRSQITARQKKLENMKKDIEAKLPSLTSQQRQAKVKELEKKVGEYQKYVQDAEKAMRKTEGELTESM
SKAIQKAADDYGKANGFAVIVPKRDLLYLGDKVDVKDVTEDILKSIR

Sequences:

>Translated_207_residues
MKPIASIALLLCLVSFSAMAEESPKVLPQPAAEPPKILQPAPELLKTAEPPKLAEPSQAQQPMKIGYVDLSKIATDSAPG
KAASAKMKEKTEKYRSQITARQKKLENMKKDIEAKLPSLTSQQRQAKVKELEKKVGEYQKYVQDAEKAMRKTEGELTESM
SKAIQKAADDYGKANGFAVIVPKRDLLYLGDKVDVKDVTEDILKSIR
>Mature_207_residues
MKPIASIALLLCLVSFSAMAEESPKVLPQPAAEPPKILQPAPELLKTAEPPKLAEPSQAQQPMKIGYVDLSKIATDSAPG
KAASAKMKEKTEKYRSQITARQKKLENMKKDIEAKLPSLTSQQRQAKVKELEKKVGEYQKYVQDAEKAMRKTEGELTESM
SKAIQKAADDYGKANGFAVIVPKRDLLYLGDKVDVKDVTEDILKSIR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22854; Mature: 22854

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPIASIALLLCLVSFSAMAEESPKVLPQPAAEPPKILQPAPELLKTAEPPKLAEPSQAQ
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCHHHHHCCCCCCCCCCHHHC
QPMKIGYVDLSKIATDSAPGKAASAKMKEKTEKYRSQITARQKKLENMKKDIEAKLPSLT
CCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
SQQRQAKVKELEKKVGEYQKYVQDAEKAMRKTEGELTESMSKAIQKAADDYGKANGFAVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
VPKRDLLYLGDKVDVKDVTEDILKSIR
ECCCCEEEECCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MKPIASIALLLCLVSFSAMAEESPKVLPQPAAEPPKILQPAPELLKTAEPPKLAEPSQAQ
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCHHHHHCCCCCCCCCCHHHC
QPMKIGYVDLSKIATDSAPGKAASAKMKEKTEKYRSQITARQKKLENMKKDIEAKLPSLT
CCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
SQQRQAKVKELEKKVGEYQKYVQDAEKAMRKTEGELTESMSKAIQKAADDYGKANGFAVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
VPKRDLLYLGDKVDVKDVTEDILKSIR
ECCCCEEEECCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA