| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is maeB [H]
Identifier: 78222846
GI number: 78222846
Start: 1835829
End: 1838087
Strand: Reverse
Name: maeB [H]
Synonym: Gmet_1637
Alternate gene names: 78222846
Gene position: 1838087-1835829 (Counterclockwise)
Preceding gene: 78222858
Following gene: 78222845
Centisome position: 45.98
GC content: 58.26
Gene sequence:
>2259_bases ATGAGCAAAAAACAGGATGCCCTGGAATACCATTCGAGCGGACGCAAAGGAAAGATAGAAGTCGTCGCCTCGAAGCCTTG CCTTACCCAGCGGGACCTCTCTCTTGCCTACTCCCCGGGCGTTGCCGAACCGTGCCTGGAAATCGAGAAAAACCCTGAGG ATGCTTATAAGTACACCGCGAAAGGAAACCTGGTCGCCGTAGTCTCCAACGGCACCGCGGTCCTGGGGCTCGGGAACATC GGCGCCCTTGCCGGCAAACCGGTCATGGAAGGGAAAGGCGTCCTCTTCAAGCGCTTTGCCGACATCGACGTCTTTGACAT CGAACTGAACACCGAGAACCCCGATGAGGTGATCAAAGCCTGCCAACTCCTCGAGCCCACGTTCGGCGGCATCAACCTGG AGGATATCAAGGCCCCCGAGTGCTTCTATATCGAGGAAGAGCTCAAGAAGACCATGAACATCCCGGTCTTCCACGACGAC CAACACGGCACCGCCATCATCTCCGCCGCCGCCCTCACCAATGCGCTGGAGATCATCGACAAGAAGATCGAGGATATTCG CATCGTGGTGAACGGGGCCGGGGCCTCGGCCATCGCCTGCGCCAACCTCGCCATCTCGTTGGGGGTGAAGAAGGAAAACC TCGTCATGTGCGATACCAAGGGTGTCATCTACAAGGGACGCACCGAGGGGATGAACAAGTATAAGGAACGCTTCGCCGTG GACACCCCTCTGCGCACCCTGGAAGAGGCCGCGACAGGGGCCGACGTCCTCTACGGCCTCTCCTCCAAGGGGGCATTCAC GCCGGAGATTGTGCGCAAGCTGGCCAAGAATCCCATTATCTTCGCCATGGCCAACCCGGACCCGGAAATATCGCCGGAAG AGGCCCATGCCGTGCGGGGCGATGTCCTCATCGCCACCGGCCGTTCCGATTATCCGAACCAGGTGAACAACGTCCTCGGC TTCCCCTTCATCTTCCGGGGAGCCCTCGATGTCCGGGCCACTACCATTAACGAGGAGATGAAGAAGGCTGCTGTTTTCGC CCTTGCCGAGCTTGCCCGTGAGGAATGCCCCGACTCGGTCTGCCGCGCTTACGGCAACGTGAAGTTTTCCTTTGGCCGCG ACTACATCATTCCGAAACCCTTTGACCCCCGTGCCCTCCTGCGGGTGGCACCGGCAGTTGCCAAAGCGGCCATGGAATCG GGGGTGGCCCGCCAGCCCATCGAGGATATGGAGAAGTACGTTGAGCATCTTGAGTCGTTGCAGGGTAAAGCAAAGGAAGC CCTGCGGATGATCATTAACAAGGCCAAAGCCGATCCCAGGAAGCTCGTCTTCCCCGAGGGAGATAACGAAAAAATCCTCA GGGCGACTCAGATTCTCATTGAAGAAGAGATTGCCAAACCGATCCTCATCGGCAACCAGGACAAGATCCGGGAAAAGATG GCGGAACTGGGACTCGACTTCAACGGCAGTGTCCAGATCATTGACCCGGCCACCTTTGAGCGTTCCGAAGAATATGCCCA GGAACTCTTCAGCCTGCGGCAGCGCAAGGGACTGACCCTCACTGAAGCACGCCGGATCATGACCCGCAAATCCCGCACCC ATTTCGGCTGTATGATGGTACACATGGGGGATGCGGACTGCCTCCTCTCCGGCATCGACACCCATTACCCCGAGACCATC CGTCCGGCCCTTGAGGTCATCGGCAGACAGCCGGGTCTGTCCAGCGTGCACGGTCTCTACATGATGGTCTTCAAGAAGGG GATTTATTTCATGGCCGATACCACGGTCTGCATCGAGCCGACTCCGGAAGAACTGGCGGAAACCGCCATTCTTGCGGCGG AAAAAGTCCGCATGCTCGACATCGAGCCGACAATCGCCATGCTCTCCTTCTCCAACTTCGGCTCCGTCAACCATCCCCAG GCCCAGAAGGTCAGGCGTGCCGTCGAGATCGTCAAACAAAAGGCTCCCGATCTTATCGTCGACGGTGAAATGCAGTCGGA CACCGCAGTCGTCTCGGAGATGCTGCAGAAGAGCTTCTCCTTTGCCTCCCTCAAGGAGGCGGCCAACGTCCTGATTTTCC CCGACCTGAACTCCGGAAACATCTGCTACAAACTCCTCCACCATCTAGGCGGGGCTGAAGCGATCGGTCCGATTCTTATG GGAATGCAGAAACCGGTTCACGTCCTCCAGCGGGGTGACGATGTGAGCGACATCGTGAACATGGCGGCGCTTGCAGTGGT GGATGCCCAGAATTCGTAA
Upstream 100 bases:
>100_bases AGAAATCAGCAAAATAAAACCGTGTAACACGGCTGAATTAAAGCGAAGCAATTTTTATTATGACTGAAATTTGTCCACAA AGAAAGGAGCAAGGAATCAC
Downstream 100 bases:
>100_bases TAGCTTCACATAAGAAATGCAGAACAACGAAGGGGGCCATGAGCCCCCTTTCTCTTGCCATCCGTCTGGATACTTTGATA AAATTCCGTCTTAATCATAT
Product: malic enzyme
Products: NA
Alternate protein names: NADP-ME [H]
Number of amino acids: Translated: 752; Mature: 751
Protein sequence:
>752_residues MSKKQDALEYHSSGRKGKIEVVASKPCLTQRDLSLAYSPGVAEPCLEIEKNPEDAYKYTAKGNLVAVVSNGTAVLGLGNI GALAGKPVMEGKGVLFKRFADIDVFDIELNTENPDEVIKACQLLEPTFGGINLEDIKAPECFYIEEELKKTMNIPVFHDD QHGTAIISAAALTNALEIIDKKIEDIRIVVNGAGASAIACANLAISLGVKKENLVMCDTKGVIYKGRTEGMNKYKERFAV DTPLRTLEEAATGADVLYGLSSKGAFTPEIVRKLAKNPIIFAMANPDPEISPEEAHAVRGDVLIATGRSDYPNQVNNVLG FPFIFRGALDVRATTINEEMKKAAVFALAELAREECPDSVCRAYGNVKFSFGRDYIIPKPFDPRALLRVAPAVAKAAMES GVARQPIEDMEKYVEHLESLQGKAKEALRMIINKAKADPRKLVFPEGDNEKILRATQILIEEEIAKPILIGNQDKIREKM AELGLDFNGSVQIIDPATFERSEEYAQELFSLRQRKGLTLTEARRIMTRKSRTHFGCMMVHMGDADCLLSGIDTHYPETI RPALEVIGRQPGLSSVHGLYMMVFKKGIYFMADTTVCIEPTPEELAETAILAAEKVRMLDIEPTIAMLSFSNFGSVNHPQ AQKVRRAVEIVKQKAPDLIVDGEMQSDTAVVSEMLQKSFSFASLKEAANVLIFPDLNSGNICYKLLHHLGGAEAIGPILM GMQKPVHVLQRGDDVSDIVNMAALAVVDAQNS
Sequences:
>Translated_752_residues MSKKQDALEYHSSGRKGKIEVVASKPCLTQRDLSLAYSPGVAEPCLEIEKNPEDAYKYTAKGNLVAVVSNGTAVLGLGNI GALAGKPVMEGKGVLFKRFADIDVFDIELNTENPDEVIKACQLLEPTFGGINLEDIKAPECFYIEEELKKTMNIPVFHDD QHGTAIISAAALTNALEIIDKKIEDIRIVVNGAGASAIACANLAISLGVKKENLVMCDTKGVIYKGRTEGMNKYKERFAV DTPLRTLEEAATGADVLYGLSSKGAFTPEIVRKLAKNPIIFAMANPDPEISPEEAHAVRGDVLIATGRSDYPNQVNNVLG FPFIFRGALDVRATTINEEMKKAAVFALAELAREECPDSVCRAYGNVKFSFGRDYIIPKPFDPRALLRVAPAVAKAAMES GVARQPIEDMEKYVEHLESLQGKAKEALRMIINKAKADPRKLVFPEGDNEKILRATQILIEEEIAKPILIGNQDKIREKM AELGLDFNGSVQIIDPATFERSEEYAQELFSLRQRKGLTLTEARRIMTRKSRTHFGCMMVHMGDADCLLSGIDTHYPETI RPALEVIGRQPGLSSVHGLYMMVFKKGIYFMADTTVCIEPTPEELAETAILAAEKVRMLDIEPTIAMLSFSNFGSVNHPQ AQKVRRAVEIVKQKAPDLIVDGEMQSDTAVVSEMLQKSFSFASLKEAANVLIFPDLNSGNICYKLLHHLGGAEAIGPILM GMQKPVHVLQRGDDVSDIVNMAALAVVDAQNS >Mature_751_residues SKKQDALEYHSSGRKGKIEVVASKPCLTQRDLSLAYSPGVAEPCLEIEKNPEDAYKYTAKGNLVAVVSNGTAVLGLGNIG ALAGKPVMEGKGVLFKRFADIDVFDIELNTENPDEVIKACQLLEPTFGGINLEDIKAPECFYIEEELKKTMNIPVFHDDQ HGTAIISAAALTNALEIIDKKIEDIRIVVNGAGASAIACANLAISLGVKKENLVMCDTKGVIYKGRTEGMNKYKERFAVD TPLRTLEEAATGADVLYGLSSKGAFTPEIVRKLAKNPIIFAMANPDPEISPEEAHAVRGDVLIATGRSDYPNQVNNVLGF PFIFRGALDVRATTINEEMKKAAVFALAELAREECPDSVCRAYGNVKFSFGRDYIIPKPFDPRALLRVAPAVAKAAMESG VARQPIEDMEKYVEHLESLQGKAKEALRMIINKAKADPRKLVFPEGDNEKILRATQILIEEEIAKPILIGNQDKIREKMA ELGLDFNGSVQIIDPATFERSEEYAQELFSLRQRKGLTLTEARRIMTRKSRTHFGCMMVHMGDADCLLSGIDTHYPETIR PALEVIGRQPGLSSVHGLYMMVFKKGIYFMADTTVCIEPTPEELAETAILAAEKVRMLDIEPTIAMLSFSNFGSVNHPQA QKVRRAVEIVKQKAPDLIVDGEMQSDTAVVSEMLQKSFSFASLKEAANVLIFPDLNSGNICYKLLHHLGGAEAIGPILMG MQKPVHVLQRGDDVSDIVNMAALAVVDAQNS
Specific function: Unknown
COG id: COG0281
COG function: function code C; Malic enzyme
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the phosphate acetyltransferase and butyryltransferase family [H]
Homologues:
Organism=Homo sapiens, GI62420882, Length=343, Percent_Identity=28.2798833819242, Blast_Score=86, Evalue=1e-16, Organism=Homo sapiens, GI62420880, Length=343, Percent_Identity=28.2798833819242, Blast_Score=86, Evalue=1e-16, Organism=Homo sapiens, GI239049447, Length=343, Percent_Identity=28.2798833819242, Blast_Score=86, Evalue=1e-16, Organism=Homo sapiens, GI4505143, Length=363, Percent_Identity=28.099173553719, Blast_Score=84, Evalue=7e-16, Organism=Homo sapiens, GI4505145, Length=352, Percent_Identity=27.2727272727273, Blast_Score=77, Evalue=8e-14, Organism=Homo sapiens, GI270265879, Length=318, Percent_Identity=27.9874213836478, Blast_Score=76, Evalue=1e-13, Organism=Escherichia coli, GI1788806, Length=753, Percent_Identity=52.9880478087649, Blast_Score=778, Evalue=0.0, Organism=Escherichia coli, GI1788635, Length=357, Percent_Identity=33.6134453781513, Blast_Score=201, Evalue=1e-52, Organism=Escherichia coli, GI1788800, Length=330, Percent_Identity=34.8484848484849, Blast_Score=195, Evalue=7e-51, Organism=Caenorhabditis elegans, GI17537199, Length=422, Percent_Identity=25.1184834123223, Blast_Score=81, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6322823, Length=270, Percent_Identity=29.6296296296296, Blast_Score=84, Evalue=6e-17, Organism=Drosophila melanogaster, GI24646388, Length=350, Percent_Identity=30, Blast_Score=99, Evalue=1e-20, Organism=Drosophila melanogaster, GI24646386, Length=350, Percent_Identity=30, Blast_Score=99, Evalue=1e-20, Organism=Drosophila melanogaster, GI281362674, Length=463, Percent_Identity=26.133909287257, Blast_Score=89, Evalue=8e-18, Organism=Drosophila melanogaster, GI281362672, Length=463, Percent_Identity=26.133909287257, Blast_Score=89, Evalue=1e-17, Organism=Drosophila melanogaster, GI21356279, Length=463, Percent_Identity=26.133909287257, Blast_Score=89, Evalue=1e-17, Organism=Drosophila melanogaster, GI78707242, Length=407, Percent_Identity=26.7813267813268, Blast_Score=87, Evalue=4e-17, Organism=Drosophila melanogaster, GI78707238, Length=407, Percent_Identity=26.7813267813268, Blast_Score=87, Evalue=4e-17, Organism=Drosophila melanogaster, GI78707240, Length=345, Percent_Identity=26.9565217391304, Blast_Score=78, Evalue=3e-14, Organism=Drosophila melanogaster, GI78707232, Length=370, Percent_Identity=25.6756756756757, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI281363505, Length=370, Percent_Identity=25.6756756756757, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI78707236, Length=370, Percent_Identity=25.6756756756757, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI281363503, Length=370, Percent_Identity=25.6756756756757, Blast_Score=72, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015884 - InterPro: IPR012301 - InterPro: IPR012302 - InterPro: IPR012188 - InterPro: IPR016040 - InterPro: IPR002505 [H]
Pfam domain/function: PF00390 malic; PF03949 Malic_M; PF01515 PTA_PTB [H]
EC number: =1.1.1.40 [H]
Molecular weight: Translated: 82340; Mature: 82209
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKQDALEYHSSGRKGKIEVVASKPCLTQRDLSLAYSPGVAEPCLEIEKNPEDAYKYTA CCCCHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEECCCCCCHHHHCCCCCHHHEEEEE KGNLVAVVSNGTAVLGLGNIGALAGKPVMEGKGVLFKRFADIDVFDIELNTENPDEVIKA CCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCHHEEEECCCEEEEEEECCCCHHHHHHH CQLLEPTFGGINLEDIKAPECFYIEEELKKTMNIPVFHDDQHGTAIISAAALTNALEIID HHHHCCCCCCCCHHHCCCCCEEEEHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHH KKIEDIRIVVNGAGASAIACANLAISLGVKKENLVMCDTKGVIYKGRTEGMNKYKERFAV HHCCEEEEEEECCCCCHHHHHHHHEEECCCCCCEEEEECCCEEEECCHHHHHHHHHHHCC DTPLRTLEEAATGADVLYGLSSKGAFTPEIVRKLAKNPIIFAMANPDPEISPEEAHAVRG CCHHHHHHHHCCCCHHEEECCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCHHHHHCCC DVLIATGRSDYPNQVNNVLGFPFIFRGALDVRATTINEEMKKAAVFALAELAREECPDSV CEEEEECCCCCCHHHHHHCCCHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCHHH CRAYGNVKFSFGRDYIIPKPFDPRALLRVAPAVAKAAMESGVARQPIEDMEKYVEHLESL HHHHCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH QGKAKEALRMIINKAKADPRKLVFPEGDNEKILRATQILIEEEIAKPILIGNQDKIREKM HHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCEEECCHHHHHHHH AELGLDFNGSVQIIDPATFERSEEYAQELFSLRQRKGLTLTEARRIMTRKSRTHFGCMMV HHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEE HMGDADCLLSGIDTHYPETIRPALEVIGRQPGLSSVHGLYMMVFKKGIYFMADTTVCIEP EECCHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCEEEEECCEEEECC TPEELAETAILAAEKVRMLDIEPTIAMLSFSNFGSVNHPQAQKVRRAVEIVKQKAPDLIV CHHHHHHHHHHHHHHEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEE DGEMQSDTAVVSEMLQKSFSFASLKEAANVLIFPDLNSGNICYKLLHHLGGAEAIGPILM CCCCCCHHHHHHHHHHHHCCHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCHHHHHHHHH GMQKPVHVLQRGDDVSDIVNMAALAVVDAQNS HCHHHHHHHHCCCCHHHHHHHHHHHEEECCCC >Mature Secondary Structure SKKQDALEYHSSGRKGKIEVVASKPCLTQRDLSLAYSPGVAEPCLEIEKNPEDAYKYTA CCCHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEECCCCCCHHHHCCCCCHHHEEEEE KGNLVAVVSNGTAVLGLGNIGALAGKPVMEGKGVLFKRFADIDVFDIELNTENPDEVIKA CCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCHHEEEECCCEEEEEEECCCCHHHHHHH CQLLEPTFGGINLEDIKAPECFYIEEELKKTMNIPVFHDDQHGTAIISAAALTNALEIID HHHHCCCCCCCCHHHCCCCCEEEEHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHH KKIEDIRIVVNGAGASAIACANLAISLGVKKENLVMCDTKGVIYKGRTEGMNKYKERFAV HHCCEEEEEEECCCCCHHHHHHHHEEECCCCCCEEEEECCCEEEECCHHHHHHHHHHHCC DTPLRTLEEAATGADVLYGLSSKGAFTPEIVRKLAKNPIIFAMANPDPEISPEEAHAVRG CCHHHHHHHHCCCCHHEEECCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCHHHHHCCC DVLIATGRSDYPNQVNNVLGFPFIFRGALDVRATTINEEMKKAAVFALAELAREECPDSV CEEEEECCCCCCHHHHHHCCCHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCHHH CRAYGNVKFSFGRDYIIPKPFDPRALLRVAPAVAKAAMESGVARQPIEDMEKYVEHLESL HHHHCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH QGKAKEALRMIINKAKADPRKLVFPEGDNEKILRATQILIEEEIAKPILIGNQDKIREKM HHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCEEECCHHHHHHHH AELGLDFNGSVQIIDPATFERSEEYAQELFSLRQRKGLTLTEARRIMTRKSRTHFGCMMV HHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEE HMGDADCLLSGIDTHYPETIRPALEVIGRQPGLSSVHGLYMMVFKKGIYFMADTTVCIEP EECCHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCEEEEECCEEEECC TPEELAETAILAAEKVRMLDIEPTIAMLSFSNFGSVNHPQAQKVRRAVEIVKQKAPDLIV CHHHHHHHHHHHHHHEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEE DGEMQSDTAVVSEMLQKSFSFASLKEAANVLIFPDLNSGNICYKLLHHLGGAEAIGPILM CCCCCCHHHHHHHHHHHHCCHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCHHHHHHHHH GMQKPVHVLQRGDDVSDIVNMAALAVVDAQNS HCHHHHHHHHCCCCHHHHHHHHHHHEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 36376 [H]