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The map label for this gene is rimP

Identifier: 78222793

GI number: 78222793

Start: 1784742

End: 1785221

Strand: Direct

Name: rimP

Synonym: Gmet_1583

Alternate gene names: 78222793

Gene position: 1784742-1785221 (Clockwise)

Preceding gene: 78222788

Following gene: 78222794

Centisome position: 44.65

GC content: 56.46

Gene sequence:

>480_bases
ATGGCAAAGGACGAAGTTGTCGACAGGGTTACAGCTCTGGCGGAAAGTCTCCTTTCTTCTCAGGAGATGGAGCTGGTCGA
CATCGAATATAAGCGCGAGGGGCGCCACATGGTTCTCCGGCTTTTTGTCGACAAGGCCGGCGGCATAACCCTGGATGACT
GTGCTCTGGTGAGCCGCGAATTCTCTGAGATCCTGGACGTGGAGGATTTCATCAGCGAGAATTACACCCTTGAGGTGTCA
TCCCCCGGGCTGAATCGCCCCCTTAAAAGGGAGTCCGACTACGAGCGCTACCGTGGGCGTCTAGTCAAGGTCAGGACCTA
TGATGTCGTCGAGGATGAGGCCGGGAACCGGCGTAAGACGTTCCTTGGCGACCTCGAGGGGCTTGCGGGCGGGGTTGTAA
CTCTTAAGCTTCGCGAGGGGCAGATGGCTCGAATCCCCCTTGCCAAAATCGCAAAAGCCAACCTTGAATTCGAGTTCTAG

Upstream 100 bases:

>100_bases
TGCATTTTACTTATGTGTCTGGTAGTAGGTAACAAGTTTCCGTTCACGAGAAGTGAGCTCCTCCAGCTCACTTTTTTTAT
TTTGCGAGGTTTTTCGAGGT

Downstream 100 bases:

>100_bases
ATTAGAAAGATAAAGCACTTCCAAGGAGAGACGGACGTGGAAACGACCTTCAACCTCAAGCACATTATTGATCAGATCGT
GAAGGAAAAGGGGATAGACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MAKDEVVDRVTALAESLLSSQEMELVDIEYKREGRHMVLRLFVDKAGGITLDDCALVSREFSEILDVEDFISENYTLEVS
SPGLNRPLKRESDYERYRGRLVKVRTYDVVEDEAGNRRKTFLGDLEGLAGGVVTLKLREGQMARIPLAKIAKANLEFEF

Sequences:

>Translated_159_residues
MAKDEVVDRVTALAESLLSSQEMELVDIEYKREGRHMVLRLFVDKAGGITLDDCALVSREFSEILDVEDFISENYTLEVS
SPGLNRPLKRESDYERYRGRLVKVRTYDVVEDEAGNRRKTFLGDLEGLAGGVVTLKLREGQMARIPLAKIAKANLEFEF
>Mature_158_residues
AKDEVVDRVTALAESLLSSQEMELVDIEYKREGRHMVLRLFVDKAGGITLDDCALVSREFSEILDVEDFISENYTLEVSS
PGLNRPLKRESDYERYRGRLVKVRTYDVVEDEAGNRRKTFLGDLEGLAGGVVTLKLREGQMARIPLAKIAKANLEFEF

Specific function: Required for maturation of 30S ribosomal subunits

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family

Homologues:

Organism=Escherichia coli, GI226510978, Length=150, Percent_Identity=42, Blast_Score=93, Evalue=8e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RIMP_GEOMG (Q39VA9)

Other databases:

- EMBL:   CP000148
- RefSeq:   YP_384540.1
- ProteinModelPortal:   Q39VA9
- SMR:   Q39VA9
- STRING:   Q39VA9
- GeneID:   3740564
- GenomeReviews:   CP000148_GR
- KEGG:   gme:Gmet_1583
- NMPDR:   fig|269799.3.peg.1422
- eggNOG:   COG0779
- HOGENOM:   HBG668072
- OMA:   ELVEVEW
- PhylomeDB:   Q39VA9
- ProtClustDB:   PRK14647
- BioCyc:   GMET269799:GMET_1583-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01077
- InterPro:   IPR003728

Pfam domain/function: PF02576 DUF150

EC number: NA

Molecular weight: Translated: 18046; Mature: 17915

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKDEVVDRVTALAESLLSSQEMELVDIEYKREGRHMVLRLFVDKAGGITLDDCALVSRE
CCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCHHHHHHHHHH
FSEILDVEDFISENYTLEVSSPGLNRPLKRESDYERYRGRLVKVRTYDVVEDEAGNRRKT
HHHHHCHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHCCEEEEEEEEEEECCCCCCCHHH
FLGDLEGLAGGVVTLKLREGQMARIPLAKIAKANLEFEF
HHHHHHCCCCCEEEEEECCCCEEECCHHHHHHCCCEECC
>Mature Secondary Structure 
AKDEVVDRVTALAESLLSSQEMELVDIEYKREGRHMVLRLFVDKAGGITLDDCALVSRE
CHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCHHHHHHHHHH
FSEILDVEDFISENYTLEVSSPGLNRPLKRESDYERYRGRLVKVRTYDVVEDEAGNRRKT
HHHHHCHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHCCEEEEEEEEEEECCCCCCCHHH
FLGDLEGLAGGVVTLKLREGQMARIPLAKIAKANLEFEF
HHHHHHCCCCCEEEEEECCCCEEECCHHHHHHCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA