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The map label for this gene is yebA [C]

Identifier: 78222771

GI number: 78222771

Start: 1763686

End: 1764264

Strand: Direct

Name: yebA [C]

Synonym: Gmet_1559

Alternate gene names: 78222771

Gene position: 1763686-1764264 (Clockwise)

Preceding gene: 78222770

Following gene: 78222772

Centisome position: 44.12

GC content: 60.62

Gene sequence:

>579_bases
ATGAACCGTCTTTTCATTGTTGTAGTGATGCTCCTGGCTCCGCTTTCGGCGTGGGGCGAACTGGAATTGCCGGTAAGCGG
TACAGTCACTTCCGGCGTGGGGTGGCGTGTAGACCCGTTCGGCAGTAGCAGGCTCGTTTACCACCGGGGTATCGACATCG
CTGTCCCGGTCGGCACGCCGGTTCGGGCAACCCGTGGAGGACGGGTCATTCATGCTGGTCTGCATGGCGGCCATGGGCTG
GCCGTCATAGTCGAAGACGACAGCGGCGGCAGGACACTCTACGGGCATAATTCCGAACTTGTCGTCCGGCCGGGAGAACG
GATTGAACCTGGTGAAGTTATCGCGCGGTCAGGGAACTCGGGCAGATCAACGGGGCCCCACGTCCATTACGAGGTGTTGC
GCGACGGCAGAGAAACAATCACTGTGGCACGGGCCGACGAGGAGCTTCCCCGGCCAGCAAAAGCTGATGGAGGCCTTCGA
CGGCAACAGGAGCAGCGGATGGACGAGATTGTGAATTCCATTCTGCGCGGGATCGGTTCAGCAGGAGATGGGCAGGGGGG
AGGCGAACCCAATATGTAA

Upstream 100 bases:

>100_bases
CCGGAGAGCGGTATCTCAGTACCGTTCTTTTCCAGGATCAGTAGGAGTACCCCCGCGCCCCTGCCGGGGCCTTGGGCGGG
GGTGCGGGGAGGGGTAACTA

Downstream 100 bases:

>100_bases
TAGTCGGCATTCGTTGTGTTGCGGCGGCGAGAGAGGTTGTTATCCTTTGATATGAGAATGGACAATGAAGAAATCTTATC
TCATACATGGGGCAAAGGGC

Product: peptidase M23B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MNRLFIVVVMLLAPLSAWGELELPVSGTVTSGVGWRVDPFGSSRLVYHRGIDIAVPVGTPVRATRGGRVIHAGLHGGHGL
AVIVEDDSGGRTLYGHNSELVVRPGERIEPGEVIARSGNSGRSTGPHVHYEVLRDGRETITVARADEELPRPAKADGGLR
RQQEQRMDEIVNSILRGIGSAGDGQGGGEPNM

Sequences:

>Translated_192_residues
MNRLFIVVVMLLAPLSAWGELELPVSGTVTSGVGWRVDPFGSSRLVYHRGIDIAVPVGTPVRATRGGRVIHAGLHGGHGL
AVIVEDDSGGRTLYGHNSELVVRPGERIEPGEVIARSGNSGRSTGPHVHYEVLRDGRETITVARADEELPRPAKADGGLR
RQQEQRMDEIVNSILRGIGSAGDGQGGGEPNM
>Mature_192_residues
MNRLFIVVVMLLAPLSAWGELELPVSGTVTSGVGWRVDPFGSSRLVYHRGIDIAVPVGTPVRATRGGRVIHAGLHGGHGL
AVIVEDDSGGRTLYGHNSELVVRPGERIEPGEVIARSGNSGRSTGPHVHYEVLRDGRETITVARADEELPRPAKADGGLR
RQQEQRMDEIVNSILRGIGSAGDGQGGGEPNM

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=136, Percent_Identity=38.2352941176471, Blast_Score=84, Evalue=6e-18,
Organism=Escherichia coli, GI87082297, Length=89, Percent_Identity=38.2022471910112, Blast_Score=60, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 20405; Mature: 20405

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRLFIVVVMLLAPLSAWGELELPVSGTVTSGVGWRVDPFGSSRLVYHRGIDIAVPVGTP
CCHHHHHHHHHHHCCCCCCEEECCCCCCEECCCCEEECCCCCCEEEEECCCEEEEECCCC
VRATRGGRVIHAGLHGGHGLAVIVEDDSGGRTLYGHNSELVVRPGERIEPGEVIARSGNS
CEECCCCEEEEEECCCCCEEEEEEECCCCCEEEEECCCEEEECCCCCCCCCCEEEECCCC
GRSTGPHVHYEVLRDGRETITVARADEELPRPAKADGGLRRQQEQRMDEIVNSILRGIGS
CCCCCCEEEHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
AGDGQGGGEPNM
CCCCCCCCCCCC
>Mature Secondary Structure
MNRLFIVVVMLLAPLSAWGELELPVSGTVTSGVGWRVDPFGSSRLVYHRGIDIAVPVGTP
CCHHHHHHHHHHHCCCCCCEEECCCCCCEECCCCEEECCCCCCEEEEECCCEEEEECCCC
VRATRGGRVIHAGLHGGHGLAVIVEDDSGGRTLYGHNSELVVRPGERIEPGEVIARSGNS
CEECCCCEEEEEECCCCCEEEEEEECCCCCEEEEECCCEEEECCCCCCCCCCEEEECCCC
GRSTGPHVHYEVLRDGRETITVARADEELPRPAKADGGLRRQQEQRMDEIVNSILRGIGS
CCCCCCEEEHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
AGDGQGGGEPNM
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12089438 [H]