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The map label for this gene is rpfG [H]

Identifier: 78222772

GI number: 78222772

Start: 1764329

End: 1765282

Strand: Direct

Name: rpfG [H]

Synonym: Gmet_1560

Alternate gene names: 78222772

Gene position: 1764329-1765282 (Clockwise)

Preceding gene: 78222771

Following gene: 78222773

Centisome position: 44.14

GC content: 54.3

Gene sequence:

>954_bases
ATGAAGAAATCTTATCTCATACATGGGGCAAAGGGCAGGGTCGTCATCTTGGTTTTATTGACGGCTGTTATCGCCTTGTT
CCATTTTGTCGTGCCGACCGAGTCTCACGTCTATCATGCGCTGCATATCGTACTCCGTAAGCTCTACTTCCTCCCTCCTG
TAATGGCAGGTGCCTGGTTTGGCCTAAGGGGTGCTGTCTACACGACATCGGCCGTCACAATCCTTTTTTCCCTCCATGCT
TTTCTCGACTGGCCGGGGAACTACATGGAGCAGGCCAACCAGATGGGGGAACTTGCCAGTTTCTGGGTAGTAGGGCTTGT
CTCCGGCTGGCTCTTCGACCGGCAGCGGGCACTTCTCGCGGAGCTTGCCACGGCCAACGAAGAGACACTCCTGGCTCTCG
TTTCGGCCCTCGACATGAGGGCAAAAAACAGCCGGCTCCATTCCCTGCGGGTACGGGAAATTGCCCTCCGTCTTGCTGAC
CATCTGGGTGTAACCGAAAATGAAAGAAAGGCGATAGGATTTGGTGCGTTGCTGCACGAAGTGGGAAAAGTTTCAATTCA
CGATTCCGTGTTTACCCTCTTAAAACGGGTCGGTCTCCCGGAATTAGAACTGAAGGAAATGCGCTCGTACCCCGAAGCGG
GGTATAATTTACTGCGGAAAATCGGTTTTCTCCGTGAAGCGGCAGAGATCGTCCGTGCCCACCAGGAACATTTCGACGGA
AGCGGCTACCCACGCGGCCTCAGAGGGGAGGAGATTCCGCTTGGTGCAAGGTTGCTGCTGATTGCAGACACTTTCGAGAA
ACTCATTACCGGCATCGGTGCCGTTCAGTGCGAGGAGGCTGTCAGAATTATTCGGGAAGGTTCAGGAGGAGAATTCGATC
CGGGACTCGTGGACCTCTTTACGGGAATCGGTTGCGACGAATTGAGCCACGTGGCGAGCGCGAAAGATGAGTAG

Upstream 100 bases:

>100_bases
GGAGATGGGCAGGGGGGAGGCGAACCCAATATGTAATAGTCGGCATTCGTTGTGTTGCGGCGGCGAGAGAGGTTGTTATC
CTTTGATATGAGAATGGACA

Downstream 100 bases:

>100_bases
TCGGAACCCGGGTATGCATGGATTGAGCAAATTGCCGCGGTCATTCACGCTATAGTTACTGACAATGCATGTTCAGGAAG
GTGCTTAAGGAGGGAGGTGA

Product: metal dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MKKSYLIHGAKGRVVILVLLTAVIALFHFVVPTESHVYHALHIVLRKLYFLPPVMAGAWFGLRGAVYTTSAVTILFSLHA
FLDWPGNYMEQANQMGELASFWVVGLVSGWLFDRQRALLAELATANEETLLALVSALDMRAKNSRLHSLRVREIALRLAD
HLGVTENERKAIGFGALLHEVGKVSIHDSVFTLLKRVGLPELELKEMRSYPEAGYNLLRKIGFLREAAEIVRAHQEHFDG
SGYPRGLRGEEIPLGARLLLIADTFEKLITGIGAVQCEEAVRIIREGSGGEFDPGLVDLFTGIGCDELSHVASAKDE

Sequences:

>Translated_317_residues
MKKSYLIHGAKGRVVILVLLTAVIALFHFVVPTESHVYHALHIVLRKLYFLPPVMAGAWFGLRGAVYTTSAVTILFSLHA
FLDWPGNYMEQANQMGELASFWVVGLVSGWLFDRQRALLAELATANEETLLALVSALDMRAKNSRLHSLRVREIALRLAD
HLGVTENERKAIGFGALLHEVGKVSIHDSVFTLLKRVGLPELELKEMRSYPEAGYNLLRKIGFLREAAEIVRAHQEHFDG
SGYPRGLRGEEIPLGARLLLIADTFEKLITGIGAVQCEEAVRIIREGSGGEFDPGLVDLFTGIGCDELSHVASAKDE
>Mature_317_residues
MKKSYLIHGAKGRVVILVLLTAVIALFHFVVPTESHVYHALHIVLRKLYFLPPVMAGAWFGLRGAVYTTSAVTILFSLHA
FLDWPGNYMEQANQMGELASFWVVGLVSGWLFDRQRALLAELATANEETLLALVSALDMRAKNSRLHSLRVREIALRLAD
HLGVTENERKAIGFGALLHEVGKVSIHDSVFTLLKRVGLPELELKEMRSYPEAGYNLLRKIGFLREAAEIVRAHQEHFDG
SGYPRGLRGEEIPLGARLLLIADTFEKLITGIGAVQCEEAVRIIREGSGGEFDPGLVDLFTGIGCDELSHVASAKDE

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 35048; Mature: 35048

Theoretical pI: Translated: 6.85; Mature: 6.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSYLIHGAKGRVVILVLLTAVIALFHFVVPTESHVYHALHIVLRKLYFLPPVMAGAWF
CCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHHH
GLRGAVYTTSAVTILFSLHAFLDWPGNYMEQANQMGELASFWVVGLVSGWLFDRQRALLA
HHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELATANEETLLALVSALDMRAKNSRLHSLRVREIALRLADHLGVTENERKAIGFGALLHE
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
VGKVSIHDSVFTLLKRVGLPELELKEMRSYPEAGYNLLRKIGFLREAAEIVRAHQEHFDG
HCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SGYPRGLRGEEIPLGARLLLIADTFEKLITGIGAVQCEEAVRIIREGSGGEFDPGLVDLF
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHH
TGIGCDELSHVASAKDE
HCCCHHHHHHHHCCCCC
>Mature Secondary Structure
MKKSYLIHGAKGRVVILVLLTAVIALFHFVVPTESHVYHALHIVLRKLYFLPPVMAGAWF
CCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHHH
GLRGAVYTTSAVTILFSLHAFLDWPGNYMEQANQMGELASFWVVGLVSGWLFDRQRALLA
HHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELATANEETLLALVSALDMRAKNSRLHSLRVREIALRLADHLGVTENERKAIGFGALLHE
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
VGKVSIHDSVFTLLKRVGLPELELKEMRSYPEAGYNLLRKIGFLREAAEIVRAHQEHFDG
HCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SGYPRGLRGEEIPLGARLLLIADTFEKLITGIGAVQCEEAVRIIREGSGGEFDPGLVDLF
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHH
TGIGCDELSHVASAKDE
HCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]