| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78222299
Identifier: 78222299
GI number: 78222299
Start: 1203552
End: 1203887
Strand: Reverse
Name: 78222299
Synonym: Gmet_1081
Alternate gene names: NA
Gene position: 1203887-1203552 (Counterclockwise)
Preceding gene: 78222300
Following gene: 78222298
Centisome position: 30.12
GC content: 64.29
Gene sequence:
>336_bases ATGCCAGAGAACGCCCCGGGAACGCTGACCATAAGACTGACCGGCGACTGGTCCATGACCGGCGTCACGCAGCAGCTCCT CCCCCTGACGGAGCACCTGGCCGCCCTTTCCGGAGTGCATCCGCAGCAGGTGCAGCCGGTCATCGACATGGCGGAGGTCG CCCTGTTCGATGCCTGCGGCTGCCAGCTCCTGACGATACTCCTGCGCCATCTGAGGCTCCTGGGCTTCTCTCCCGTTCTG GCCAATATCCCGGCAGAACTCCGCGGCAGCATCGAGCTCCTCGGCTTCGGCCACGAATTCGAGACGATGCTTGACGTCAC CAGAGGACACGCATGA
Upstream 100 bases:
>100_bases GCTCAATTTTATTCTCGTACGCTCTGGCATTCCGGCTGCAATGCGTATCGTATAAACCGGCACTCTTTTCAGCCGGCCGA CAATGCCAAGGAGGCCCACC
Downstream 100 bases:
>100_bases CCGCCCCGGATCACCACAACACCTCCATCGACCTCGATCGCTTCAACGCCGTCTTTTTCGAGGAATGCGCCGAGCACCTG GCCGATATGGAGCACATCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 111; Mature: 110
Protein sequence:
>111_residues MPENAPGTLTIRLTGDWSMTGVTQQLLPLTEHLAALSGVHPQQVQPVIDMAEVALFDACGCQLLTILLRHLRLLGFSPVL ANIPAELRGSIELLGFGHEFETMLDVTRGHA
Sequences:
>Translated_111_residues MPENAPGTLTIRLTGDWSMTGVTQQLLPLTEHLAALSGVHPQQVQPVIDMAEVALFDACGCQLLTILLRHLRLLGFSPVL ANIPAELRGSIELLGFGHEFETMLDVTRGHA >Mature_110_residues PENAPGTLTIRLTGDWSMTGVTQQLLPLTEHLAALSGVHPQQVQPVIDMAEVALFDACGCQLLTILLRHLRLLGFSPVLA NIPAELRGSIELLGFGHEFETMLDVTRGHA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12023; Mature: 11892
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: PS50801 STAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPENAPGTLTIRLTGDWSMTGVTQQLLPLTEHLAALSGVHPQQVQPVIDMAEVALFDACG CCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH CQLLTILLRHLRLLGFSPVLANIPAELRGSIELLGFGHEFETMLDVTRGHA HHHHHHHHHHHHHHCCCHHHHCCCHHHCCCEEEEECCCHHHHHHHHHCCCC >Mature Secondary Structure PENAPGTLTIRLTGDWSMTGVTQQLLPLTEHLAALSGVHPQQVQPVIDMAEVALFDACG CCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH CQLLTILLRHLRLLGFSPVLANIPAELRGSIELLGFGHEFETMLDVTRGHA HHHHHHHHHHHHHHCCCHHHHCCCHHHCCCEEEEECCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA