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The map label for this gene is yjbQ [C]

Identifier: 78221947

GI number: 78221947

Start: 800137

End: 800568

Strand: Reverse

Name: yjbQ [C]

Synonym: Gmet_0727

Alternate gene names: 78221947

Gene position: 800568-800137 (Counterclockwise)

Preceding gene: 78221948

Following gene: 78221946

Centisome position: 20.03

GC content: 61.57

Gene sequence:

>432_bases
GTGACGAACAAACCATCGGGGAGGGACGGGGCCATGGTCAGATACCTGGAAATCAGGAGCAGGGCTAAAGCGGAGTTCAT
CGACATCACTTCCATGGTACGGGAGCAGGTGCGGGGTTCCGGCGTCACCTGCGGCATCTGCCATATCTTCGTCCTCCACA
CCACCGCCGGCCTGACCATCAACGAAGGGGCTGACCCGGCCGTCCAACGGGACATACTGACCTACCTCGACCGCCTCGTC
CCCCGCGACCCGTACTTCACCCACAAGGAAGGGAACTCCGACGCCCACATCAAGTCGACCCTCACTGGGACTTCCCTGAC
GGTCTTCTTCAACGAGGGGAAGCTCCTGCTTGGCACCTGGCAATCCATCTACCTCTGCGAGTTCGACGGGCCGCGCCAGC
GCAAGGTTGCCCTCAAGATCGTCTCCTGCTGA

Upstream 100 bases:

>100_bases
GCAAGATCGGCCTGCGCAAACCGCCGGTAGTCGGCTTTCTCAGGCGGGACCACCCCATTAACAAGTATCTCGGCATAGTT
ATGAAAAAGTTGAGACTCAG

Downstream 100 bases:

>100_bases
CGCCGCCATGGGCGACAGGCTCACCTTCGTCTACGGTCCCGGCGTCGACATCAGCTATCGCGTTGTCGGCCACGGCCCGA
CGCCGGTCGTCTTTGTCCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MTNKPSGRDGAMVRYLEIRSRAKAEFIDITSMVREQVRGSGVTCGICHIFVLHTTAGLTINEGADPAVQRDILTYLDRLV
PRDPYFTHKEGNSDAHIKSTLTGTSLTVFFNEGKLLLGTWQSIYLCEFDGPRQRKVALKIVSC

Sequences:

>Translated_143_residues
MTNKPSGRDGAMVRYLEIRSRAKAEFIDITSMVREQVRGSGVTCGICHIFVLHTTAGLTINEGADPAVQRDILTYLDRLV
PRDPYFTHKEGNSDAHIKSTLTGTSLTVFFNEGKLLLGTWQSIYLCEFDGPRQRKVALKIVSC
>Mature_142_residues
TNKPSGRDGAMVRYLEIRSRAKAEFIDITSMVREQVRGSGVTCGICHIFVLHTTAGLTINEGADPAVQRDILTYLDRLVP
RDPYFTHKEGNSDAHIKSTLTGTSLTVFFNEGKLLLGTWQSIYLCEFDGPRQRKVALKIVSC

Specific function: Unknown

COG id: COG0432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0047 family [H]

Homologues:

Organism=Escherichia coli, GI1790491, Length=89, Percent_Identity=41.5730337078652, Blast_Score=74, Evalue=4e-15,
Organism=Drosophila melanogaster, GI221476589, Length=134, Percent_Identity=35.0746268656716, Blast_Score=92, Evalue=1e-19,
Organism=Drosophila melanogaster, GI221476594, Length=134, Percent_Identity=35.0746268656716, Blast_Score=91, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001602 [H]

Pfam domain/function: PF01894 UPF0047 [H]

EC number: NA

Molecular weight: Translated: 15935; Mature: 15803

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: PS00626 RCC1_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNKPSGRDGAMVRYLEIRSRAKAEFIDITSMVREQVRGSGVTCGICHIFVLHTTAGLTI
CCCCCCCCCCCEEEHEEHHCCCCHHHHHHHHHHHHHHCCCCCEEHHHHEEEEHHCCCCEE
NEGADPAVQRDILTYLDRLVPRDPYFTHKEGNSDAHIKSTLTGTSLTVFFNEGKLLLGTW
CCCCCHHHHHHHHHHHHHHCCCCCCEECCCCCCCCEEEEEECCCEEEEEECCCEEEEEEC
QSIYLCEFDGPRQRKVALKIVSC
CEEEEEECCCCCCEEEEEEEECC
>Mature Secondary Structure 
TNKPSGRDGAMVRYLEIRSRAKAEFIDITSMVREQVRGSGVTCGICHIFVLHTTAGLTI
CCCCCCCCCCEEEHEEHHCCCCHHHHHHHHHHHHHHCCCCCEEHHHHEEEEHHCCCCEE
NEGADPAVQRDILTYLDRLVPRDPYFTHKEGNSDAHIKSTLTGTSLTVFFNEGKLLLGTW
CCCCCHHHHHHHHHHHHHHCCCCCCEECCCCCCCCEEEEEECCCEEEEEECCCEEEEEEC
QSIYLCEFDGPRQRKVALKIVSC
CEEEEEECCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]