Click here to switch to the map view.

The map label for this gene is 78221948

Identifier: 78221948

GI number: 78221948

Start: 800565

End: 801008

Strand: Reverse

Name: 78221948

Synonym: Gmet_0728

Alternate gene names: NA

Gene position: 801008-800565 (Counterclockwise)

Preceding gene: 78221952

Following gene: 78221947

Centisome position: 20.04

GC content: 57.66

Gene sequence:

>444_bases
GTGGCCGGCACAAACGTCGAGGAGCTTATTGCCAGGGGCATCCGGGCCGTCAACAGCGGCAAGACATCCCTTGCCCTCGA
ATGCTTCGAAGAGGCGGTAGAACGCAGAAATACCCCCGCCAACTGGTCCTATCTGGCCTTCTGCCTCGCCAAGGAGCGTC
GTCAGTTCGATCGGGCAATTCAGCTTTGCCAGGAGGCGATCCGCAAAGATCCCCAAAACGCGGTTCACTACCTGAACTTG
GGACGAGTGTATCTCCAAGCGGGAAGCACGAAAGACGCCATCCACGTGTTCCGCCAGGGGCTCCTGTACGAGTCCAACAG
CCACATCGAGGCGGAATTGCGCAAGATCGGCCTGCGCAAACCGCCGGTAGTCGGCTTTCTCAGGCGGGACCACCCCATTA
ACAAGTATCTCGGCATAGTTATGAAAAAGTTGAGACTCAGGTGA

Upstream 100 bases:

>100_bases
ACCGCTTCTCCGTATAACCACCAGAAAAAGAAAAGAAAAAGTGTTTACACCTCCCGGTGAACTTTTATAATACTACCAGA
CACTTCATCAGGAGGAAGCC

Downstream 100 bases:

>100_bases
CGAACAAACCATCGGGGAGGGACGGGGCCATGGTCAGATACCTGGAAATCAGGAGCAGGGCTAAAGCGGAGTTCATCGAC
ATCACTTCCATGGTACGGGA

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: Dihydrofolate Reductase; TPR Domain-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide Domain Protein

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MAGTNVEELIARGIRAVNSGKTSLALECFEEAVERRNTPANWSYLAFCLAKERRQFDRAIQLCQEAIRKDPQNAVHYLNL
GRVYLQAGSTKDAIHVFRQGLLYESNSHIEAELRKIGLRKPPVVGFLRRDHPINKYLGIVMKKLRLR

Sequences:

>Translated_147_residues
MAGTNVEELIARGIRAVNSGKTSLALECFEEAVERRNTPANWSYLAFCLAKERRQFDRAIQLCQEAIRKDPQNAVHYLNL
GRVYLQAGSTKDAIHVFRQGLLYESNSHIEAELRKIGLRKPPVVGFLRRDHPINKYLGIVMKKLRLR
>Mature_146_residues
AGTNVEELIARGIRAVNSGKTSLALECFEEAVERRNTPANWSYLAFCLAKERRQFDRAIQLCQEAIRKDPQNAVHYLNLG
RVYLQAGSTKDAIHVFRQGLLYESNSHIEAELRKIGLRKPPVVGFLRRDHPINKYLGIVMKKLRLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16847; Mature: 16716

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGTNVEELIARGIRAVNSGKTSLALECFEEAVERRNTPANWSYLAFCLAKERRQFDRAI
CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
QLCQEAIRKDPQNAVHYLNLGRVYLQAGSTKDAIHVFRQGLLYESNSHIEAELRKIGLRK
HHHHHHHHCCHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCC
PPVVGFLRRDHPINKYLGIVMKKLRLR
CCHHHHHHCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AGTNVEELIARGIRAVNSGKTSLALECFEEAVERRNTPANWSYLAFCLAKERRQFDRAI
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
QLCQEAIRKDPQNAVHYLNLGRVYLQAGSTKDAIHVFRQGLLYESNSHIEAELRKIGLRK
HHHHHHHHCCHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCC
PPVVGFLRRDHPINKYLGIVMKKLRLR
CCHHHHHHCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA