Click here to switch to the map view.

The map label for this gene is 78221807

Identifier: 78221807

GI number: 78221807

Start: 651593

End: 652645

Strand: Direct

Name: 78221807

Synonym: Gmet_0586

Alternate gene names: NA

Gene position: 651593-652645 (Clockwise)

Preceding gene: 78221806

Following gene: 78221808

Centisome position: 16.3

GC content: 65.62

Gene sequence:

>1053_bases
ATGCGCTTCCCGCGGCTGGCATACCGGGTTCTGCGGAGCAACCTGGGGGACCTTCCGGAGCCGTACCGGATGACCTGGGG
GGTCACCAGCCGTTGCCAGGCCCGCTGCGCCATGTGCAACATCTGGCGCCGGCCGGCCGGAGATGAGCTTTCCCTCTCCG
AGATCGACCGGTTCCTGGCCCGTTCGAACCGGTTCTCGTGGATCAACCTGACCGGCGGAGAGATCTTCCTCCGCGACGAT
ATCGACGGGATTCTCGATGTCATCGACCGGCACTGCCGGCAGCTCTGCCTGCTCAACTTCCCCACCAACGGCCATGACAG
CGACCGGATCGTGGCGGTGGTGCGGGCGTTTCTCGCCAGGATGTCGGTGCCGCGCCTGATGGTTTCGGTCAGCCTCGATG
GTCCCCCCGAACTCCATGACCGGATCCGGGGGGTGGACGGTTCGTGGGAACGGGCCGTGGCAACCTTCCGCCGCTTGCGG
GAACTGCGGTCCCGGCGCTTTTCGGTGTTTCTCGGCTACACCGTGCAGGAAGCCAATCTGGACGGGTTCGACGGCATGCT
CCAGGCGGTCAGGCGGGAGGTGGAAGTGACGGATGACGAGCTCCACGTCAATGTGGCCCATGTTTCCGGGCTCTATTACG
ATAATGCCACCTTTTCGGGACTGCCGGCTCCGGAGGAGACCTGCCGCCTTCTGGACCGGATCAGCGCGTCGCGCCGGAGC
GGGGTAATGAGTCCGGTCTCGTTCCTCGAACGCCGCTACCAATCCCTGGTCCGTCCGTATCTGGAGCGAGGGACTACGCC
GCTTGCCTGTCAGGCGGCTGCCGCCTCCTGTTACGTCGATCCGGGCGGCACCGTCTATCCCTGCACCGGTTTTGACGCCC
CGGTCGGCTCCCTCAGGGAATGGGGGTATGATCTGGGGCGGCTCTGGCGCAGCCCACGGCGCCACGAGGTCAGGCAGGCA
GTTCGGGATGGGGCCTGTCCGGGATGCTGGACACCCTGCGAGGCATACCAGACCATCATGGCGAACCTGTTTGCTGGAGG
CGGCAAAGGGTGA

Upstream 100 bases:

>100_bases
GGGCCATCGGGGTGGAAGATGTGGCGGCTGCCATCCGGCGGAATTTCCTGGAGCCGGATGCCCCGTTTCTGCTCACCAGG
CTCTCCGGGGGTATGCGGTG

Downstream 100 bases:

>100_bases
TGATCAGGAAGGTCTATCACGATTTCCTGCTGGCGAAGCTGAAGCAGGATGGGGTGGGGTGGCTTGCCCGGCGGGCGCGC
CAGTACCTGCTGCTGCACCT

Product: radical SAM family protein

Products: NA

Alternate protein names: Radical SAM Domain Protein; Co PQQ Synthesis Protein E; Radical SAM Family Protein

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MRFPRLAYRVLRSNLGDLPEPYRMTWGVTSRCQARCAMCNIWRRPAGDELSLSEIDRFLARSNRFSWINLTGGEIFLRDD
IDGILDVIDRHCRQLCLLNFPTNGHDSDRIVAVVRAFLARMSVPRLMVSVSLDGPPELHDRIRGVDGSWERAVATFRRLR
ELRSRRFSVFLGYTVQEANLDGFDGMLQAVRREVEVTDDELHVNVAHVSGLYYDNATFSGLPAPEETCRLLDRISASRRS
GVMSPVSFLERRYQSLVRPYLERGTTPLACQAAAASCYVDPGGTVYPCTGFDAPVGSLREWGYDLGRLWRSPRRHEVRQA
VRDGACPGCWTPCEAYQTIMANLFAGGGKG

Sequences:

>Translated_350_residues
MRFPRLAYRVLRSNLGDLPEPYRMTWGVTSRCQARCAMCNIWRRPAGDELSLSEIDRFLARSNRFSWINLTGGEIFLRDD
IDGILDVIDRHCRQLCLLNFPTNGHDSDRIVAVVRAFLARMSVPRLMVSVSLDGPPELHDRIRGVDGSWERAVATFRRLR
ELRSRRFSVFLGYTVQEANLDGFDGMLQAVRREVEVTDDELHVNVAHVSGLYYDNATFSGLPAPEETCRLLDRISASRRS
GVMSPVSFLERRYQSLVRPYLERGTTPLACQAAAASCYVDPGGTVYPCTGFDAPVGSLREWGYDLGRLWRSPRRHEVRQA
VRDGACPGCWTPCEAYQTIMANLFAGGGKG
>Mature_350_residues
MRFPRLAYRVLRSNLGDLPEPYRMTWGVTSRCQARCAMCNIWRRPAGDELSLSEIDRFLARSNRFSWINLTGGEIFLRDD
IDGILDVIDRHCRQLCLLNFPTNGHDSDRIVAVVRAFLARMSVPRLMVSVSLDGPPELHDRIRGVDGSWERAVATFRRLR
ELRSRRFSVFLGYTVQEANLDGFDGMLQAVRREVEVTDDELHVNVAHVSGLYYDNATFSGLPAPEETCRLLDRISASRRS
GVMSPVSFLERRYQSLVRPYLERGTTPLACQAAAASCYVDPGGTVYPCTGFDAPVGSLREWGYDLGRLWRSPRRHEVRQA
VRDGACPGCWTPCEAYQTIMANLFAGGGKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39488; Mature: 39488

Theoretical pI: Translated: 8.29; Mature: 8.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFPRLAYRVLRSNLGDLPEPYRMTWGVTSRCQARCAMCNIWRRPAGDELSLSEIDRFLA
CCCHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
RSNRFSWINLTGGEIFLRDDIDGILDVIDRHCRQLCLLNFPTNGHDSDRIVAVVRAFLAR
HCCCCEEEEECCCEEEEECCHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHH
MSVPRLMVSVSLDGPPELHDRIRGVDGSWERAVATFRRLRELRSRRFSVFLGYTVQEANL
HCCCCEEEEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCC
DGFDGMLQAVRREVEVTDDELHVNVAHVSGLYYDNATFSGLPAPEETCRLLDRISASRRS
CCHHHHHHHHHHHHCCCCCCEEEEEEHHCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHC
GVMSPVSFLERRYQSLVRPYLERGTTPLACQAAAASCYVDPGGTVYPCTGFDAPVGSLRE
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCEEEECCCCCEEECCCCCCCHHHHHH
WGYDLGRLWRSPRRHEVRQAVRDGACPGCWTPCEAYQTIMANLFAGGGKG
HCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MRFPRLAYRVLRSNLGDLPEPYRMTWGVTSRCQARCAMCNIWRRPAGDELSLSEIDRFLA
CCCHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
RSNRFSWINLTGGEIFLRDDIDGILDVIDRHCRQLCLLNFPTNGHDSDRIVAVVRAFLAR
HCCCCEEEEECCCEEEEECCHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHH
MSVPRLMVSVSLDGPPELHDRIRGVDGSWERAVATFRRLRELRSRRFSVFLGYTVQEANL
HCCCCEEEEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCC
DGFDGMLQAVRREVEVTDDELHVNVAHVSGLYYDNATFSGLPAPEETCRLLDRISASRRS
CCHHHHHHHHHHHHCCCCCCEEEEEEHHCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHC
GVMSPVSFLERRYQSLVRPYLERGTTPLACQAAAASCYVDPGGTVYPCTGFDAPVGSLRE
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCEEEECCCCCEEECCCCCCCHHHHHH
WGYDLGRLWRSPRRHEVRQAVRDGACPGCWTPCEAYQTIMANLFAGGGKG
HCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA